The ameliorative effect of pioglitazone against colistin-induced nephrotoxicity is mediated by inhibition of NF-κB and restoration of Nrf2 signaling: An integrative bioinformatics prediction-guided in vitro study

• Published in: PloS one 2024, Vol.19 (12), p.e0314092
• Main Authors: Alharbi, Metab, Mahmoud, Mohamed A, Alshammari, Abdulrahman, Almutairi, Mashal M, Al-Ghamdi, Jihan M, Alsabhan, Jawza F, Shabanah, Othman Al, Alshalawi, Norah A, Alzarea, Sami I, Alasmari, Abdullah F
• Format: Article
• Language: English
• Subjects: Antioxidants; Bioinformatics; Biology and Life Sciences; Cell Line; Cell Survival - drug effects; Cell viability; Colistin; Colistin - adverse effects; Colistin - pharmacology; Colistin - toxicity; Colistin sulfate; Computational Biology - methods; Cytokines; Cytotoxicity; Diabetes mellitus; Drug dosages; Enzymes; Genes; Humans; Hypoxia; Inflammation; Kidney - drug effects; Kidney - metabolism; Kidney - pathology; Kidneys; Kinases; Medicine and Health Sciences; MicroRNAs; MicroRNAs - genetics; MicroRNAs - metabolism; NF-E2-Related Factor 2 - metabolism; NF-kappa B - metabolism; NF-κB protein; Ontology; Oxidative stress; Phosphatase; Pioglitazone; Pioglitazone - pharmacology; Pretreatment; Proteins; Research and Analysis Methods; Signal Transduction - drug effects; Sulfates; Toxicity; Transcription Factor RelA - metabolism; Transcription factors; Tumor necrosis factor-TNF
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0314092

Pioglitazone, an anti-diabetic drug, has been previously shown to ameliorate kidney damage through anti-inflammatory and antioxidant effects. In this study, we employed an integrative bioinformatics approach to study the possible mechanisms involved in the mitigative effect of pioglitazone against colistin-induced nephrotoxicity. Next, we validated the results obtained from the bioinformatics study by pre-treating human kidney-2 (HK-2) cell line with pioglitazone 100 μM for 30 minutes and then treating the cells with colistin sulfate 1200 μM for 24 hours. Inflammatory signaling by cytokines and the nuclear factor erythroid 2 related factor 2 (Nrf2) signaling pathways were predicted to be involved in the ameliorative effect of pioglitazone against colistin-induced nephrotoxicity. The nuclear factor kappa B subunit p65 (NF-κB p65) and Nrf2 were among the predicted transcription factors regulating the hub genes. Moreover, miR-24, miR-16, and miR-21 were identified as potential pathogenic miRNAs regulating the hub genes. In contrast, miR-17, miR-27a, and miR-146a were identified as potential protective miRNAs. The in vitro study indicated that pioglitazone pre-treatment increased cell viability in HK-2 cells exposed to colistin. Pioglitazone pre-treatment reduced the expression of pro-inflammatory cytokine genes (IL6 and TNF). Moreover, pioglitazone reduced the protein expression of NF-κB p65 and increased the protein expression of Nrf2. The protective effect of pioglitazone against colistin-induced toxicity in HK-2 cells is related to its anti-inflammatory and antioxidant activity through modulating NF-κB-mediated inflammatory signaling and Nrf2-mediated antioxidative stress signaling.