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Localization and Conditional Redundancy of Regulatory Elements in rbcS-3A, a Pea Gene Encoding the Small Subunit of Ribulose-bisphosphate Carboxylase
Expression of the pea rbcS-3A gene, one of a family of genes encoding the small subunit of ribulose-bisphosphate carboxylase [EC 4.1.1.39], is regulated by light and is restricted to chloroplast-containing cells. We analyzed the effects of light and development on rbcS-3A expression in transgenic pl...
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Published in: | Proceedings of the National Academy of Sciences - PNAS 1988-07, Vol.85 (13), p.4662-4666 |
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creator | Kuhlemeier, Cris Cuozzo, Maria Green, Pamela J. Goyvaerts, Elisabeth Ward, Kathy Chua, Nam-Hai |
description | Expression of the pea rbcS-3A gene, one of a family of genes encoding the small subunit of ribulose-bisphosphate carboxylase [EC 4.1.1.39], is regulated by light and is restricted to chloroplast-containing cells. We analyzed the effects of light and development on rbcS-3A expression in transgenic plants. Two highly conserved sequences (``boxes'' II and III) around nucleotide position -150 (relative to the transcription initiation site, +1) are required for rbcS-3A expression. The so-defined positive elements overlap with previously identified negative light-regulatory elements. In the case of box II, which has sequence similarity to the core enhancer motif of simian virus 40, a GG→ CC transversion is sufficient to abolish expression. The effect of mutations in boxes II and III can only be measured when sequences upstream of -170 are removed, because sequences both 5′ and 3′ of -170 can direct light-regulated and organ-specific expression. This implies that there is a redundancy of cis-acting elements in the 5′ noncoding region of rbcS-3A. However, we show that the sequences upstream of -170 are dispensable only in the mature leaves of a green plant. In contrast, in the young, expanding leaves at the top of a green plant, as well as in seedlings, the distal elements are required for high-level expression. Therefore, redundancy is not absolute, and the requirements for rbcS-3A expression change during plant development. |
doi_str_mv | 10.1073/pnas.85.13.4662 |
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We analyzed the effects of light and development on rbcS-3A expression in transgenic plants. Two highly conserved sequences (``boxes'' II and III) around nucleotide position -150 (relative to the transcription initiation site, +1) are required for rbcS-3A expression. The so-defined positive elements overlap with previously identified negative light-regulatory elements. In the case of box II, which has sequence similarity to the core enhancer motif of simian virus 40, a GG→ CC transversion is sufficient to abolish expression. The effect of mutations in boxes II and III can only be measured when sequences upstream of -170 are removed, because sequences both 5′ and 3′ of -170 can direct light-regulated and organ-specific expression. This implies that there is a redundancy of cis-acting elements in the 5′ noncoding region of rbcS-3A. However, we show that the sequences upstream of -170 are dispensable only in the mature leaves of a green plant. In contrast, in the young, expanding leaves at the top of a green plant, as well as in seedlings, the distal elements are required for high-level expression. Therefore, redundancy is not absolute, and the requirements for rbcS-3A expression change during plant development.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.85.13.4662</identifier><identifier>PMID: 3387433</identifier><identifier>CODEN: PNASA6</identifier><language>eng</language><publisher>Washington, DC: National Academy of Sciences of the United States of America</publisher><subject>Base Sequence ; Biological and medical sciences ; DNA ; Fabaceae - enzymology ; Fabaceae - genetics ; Fundamental and applied biological sciences. Psychology ; Genes ; Genes - radiation effects ; Genetic mutation ; Leaves ; Light ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Nucleotides ; Organ Specificity ; Peas ; Pisum sativum ; Plant Proteins - genetics ; Plants, Medicinal ; Regulatory Sequences, Nucleic Acid - radiation effects ; Reporter genes ; Ribulose-Bisphosphate Carboxylase - genetics ; RNA ; Seedlings ; Transcription. Transcription factor. Splicing. 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We analyzed the effects of light and development on rbcS-3A expression in transgenic plants. Two highly conserved sequences (``boxes'' II and III) around nucleotide position -150 (relative to the transcription initiation site, +1) are required for rbcS-3A expression. The so-defined positive elements overlap with previously identified negative light-regulatory elements. In the case of box II, which has sequence similarity to the core enhancer motif of simian virus 40, a GG→ CC transversion is sufficient to abolish expression. The effect of mutations in boxes II and III can only be measured when sequences upstream of -170 are removed, because sequences both 5′ and 3′ of -170 can direct light-regulated and organ-specific expression. This implies that there is a redundancy of cis-acting elements in the 5′ noncoding region of rbcS-3A. However, we show that the sequences upstream of -170 are dispensable only in the mature leaves of a green plant. In contrast, in the young, expanding leaves at the top of a green plant, as well as in seedlings, the distal elements are required for high-level expression. Therefore, redundancy is not absolute, and the requirements for rbcS-3A expression change during plant development.</description><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>DNA</subject><subject>Fabaceae - enzymology</subject><subject>Fabaceae - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes</subject><subject>Genes - radiation effects</subject><subject>Genetic mutation</subject><subject>Leaves</subject><subject>Light</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Nucleotides</subject><subject>Organ Specificity</subject><subject>Peas</subject><subject>Pisum sativum</subject><subject>Plant Proteins - genetics</subject><subject>Plants, Medicinal</subject><subject>Regulatory Sequences, Nucleic Acid - radiation effects</subject><subject>Reporter genes</subject><subject>Ribulose-Bisphosphate Carboxylase - genetics</subject><subject>RNA</subject><subject>Seedlings</subject><subject>Transcription. Transcription factor. Splicing. Rna processing</subject><subject>Transgenic plants</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1988</creationdate><recordtype>article</recordtype><recordid>eNqFkkuP0zAUhSMEGsrAGgkJ5AWCDen4lcRZsBhVZUCqBKKwtq4faT1y7U6coCn_g_-LS0sHNrCwrKvznet7dVwUTwmeEtywi22ANBXVlLApr2t6r5gQ3JKy5i2-X0wwpk0pOOUPi0cpXWOM20rgs-KMMdFwxibFj0XU4N13GFwMCIJBsxiM21fg0WdrxmAg6B2KXa5Wo4ch9js093Zjw5CQC6hXelmyyzcI0CcL6MoGi-ZBR-PCCg1ri5Yb8B4tRzUGN_xq5NToY7Klcmm7jvnAYNEMehVvdx6SfVw86MAn--R4nxdf382_zN6Xi49XH2aXi1JXohlKUxngpqsxxTVWGipddZS3lCpramMxrhi0vKGGMQNaaMIxVxRbrLtOEa3YefH20Hc7qo01Oq_Ug5fb3m2g38kITv6tBLeWq_hNUoF5W2X_q6O_jzejTYPcuKSt9xBsHJNsBG1FXf0fJLxtuWB1Bi8OoO5jSr3tTsMQLPeJy33iUlSSMLlPPDue_7nDiT9GnPWXRx1Sjrrrc5wunbCGNLSu24y9PmL7_r_Vu3dkN3o_2Nshky_-SWbg2QG4Tvmz3A1EBG_YT1sg2Mg</recordid><startdate>19880701</startdate><enddate>19880701</enddate><creator>Kuhlemeier, Cris</creator><creator>Cuozzo, Maria</creator><creator>Green, Pamela J.</creator><creator>Goyvaerts, Elisabeth</creator><creator>Ward, Kathy</creator><creator>Chua, Nam-Hai</creator><general>National Academy of Sciences of the United States of America</general><general>National Acad Sciences</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>19880701</creationdate><title>Localization and Conditional Redundancy of Regulatory Elements in rbcS-3A, a Pea Gene Encoding the Small Subunit of Ribulose-bisphosphate Carboxylase</title><author>Kuhlemeier, Cris ; Cuozzo, Maria ; Green, Pamela J. ; Goyvaerts, Elisabeth ; Ward, Kathy ; Chua, Nam-Hai</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c587t-d5da4df602060bca5c5f24922bed6de0053a9472d33dac8c1404b20e0cffb1cb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1988</creationdate><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>DNA</topic><topic>Fabaceae - enzymology</topic><topic>Fabaceae - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes</topic><topic>Genes - radiation effects</topic><topic>Genetic mutation</topic><topic>Leaves</topic><topic>Light</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>Nucleotides</topic><topic>Organ Specificity</topic><topic>Peas</topic><topic>Pisum sativum</topic><topic>Plant Proteins - genetics</topic><topic>Plants, Medicinal</topic><topic>Regulatory Sequences, Nucleic Acid - radiation effects</topic><topic>Reporter genes</topic><topic>Ribulose-Bisphosphate Carboxylase - genetics</topic><topic>RNA</topic><topic>Seedlings</topic><topic>Transcription. Transcription factor. Splicing. Rna processing</topic><topic>Transgenic plants</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kuhlemeier, Cris</creatorcontrib><creatorcontrib>Cuozzo, Maria</creatorcontrib><creatorcontrib>Green, Pamela J.</creatorcontrib><creatorcontrib>Goyvaerts, Elisabeth</creatorcontrib><creatorcontrib>Ward, Kathy</creatorcontrib><creatorcontrib>Chua, Nam-Hai</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kuhlemeier, Cris</au><au>Cuozzo, Maria</au><au>Green, Pamela J.</au><au>Goyvaerts, Elisabeth</au><au>Ward, Kathy</au><au>Chua, Nam-Hai</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Localization and Conditional Redundancy of Regulatory Elements in rbcS-3A, a Pea Gene Encoding the Small Subunit of Ribulose-bisphosphate Carboxylase</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>1988-07-01</date><risdate>1988</risdate><volume>85</volume><issue>13</issue><spage>4662</spage><epage>4666</epage><pages>4662-4666</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><coden>PNASA6</coden><abstract>Expression of the pea rbcS-3A gene, one of a family of genes encoding the small subunit of ribulose-bisphosphate carboxylase [EC 4.1.1.39], is regulated by light and is restricted to chloroplast-containing cells. We analyzed the effects of light and development on rbcS-3A expression in transgenic plants. Two highly conserved sequences (``boxes'' II and III) around nucleotide position -150 (relative to the transcription initiation site, +1) are required for rbcS-3A expression. The so-defined positive elements overlap with previously identified negative light-regulatory elements. In the case of box II, which has sequence similarity to the core enhancer motif of simian virus 40, a GG→ CC transversion is sufficient to abolish expression. The effect of mutations in boxes II and III can only be measured when sequences upstream of -170 are removed, because sequences both 5′ and 3′ of -170 can direct light-regulated and organ-specific expression. This implies that there is a redundancy of cis-acting elements in the 5′ noncoding region of rbcS-3A. However, we show that the sequences upstream of -170 are dispensable only in the mature leaves of a green plant. In contrast, in the young, expanding leaves at the top of a green plant, as well as in seedlings, the distal elements are required for high-level expression. Therefore, redundancy is not absolute, and the requirements for rbcS-3A expression change during plant development.</abstract><cop>Washington, DC</cop><pub>National Academy of Sciences of the United States of America</pub><pmid>3387433</pmid><doi>10.1073/pnas.85.13.4662</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Base Sequence Biological and medical sciences DNA Fabaceae - enzymology Fabaceae - genetics Fundamental and applied biological sciences. Psychology Genes Genes - radiation effects Genetic mutation Leaves Light Molecular and cellular biology Molecular genetics Molecular Sequence Data Nucleotides Organ Specificity Peas Pisum sativum Plant Proteins - genetics Plants, Medicinal Regulatory Sequences, Nucleic Acid - radiation effects Reporter genes Ribulose-Bisphosphate Carboxylase - genetics RNA Seedlings Transcription. Transcription factor. Splicing. Rna processing Transgenic plants |
title | Localization and Conditional Redundancy of Regulatory Elements in rbcS-3A, a Pea Gene Encoding the Small Subunit of Ribulose-bisphosphate Carboxylase |
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