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A Structural Model for Alzheimer's β-Amyloid Fibrils Based on Experimental Constraints from Solid State NMR
We present a structural model for amyloid fibrils formed by the 40-residue β-amyloid peptide associated with Alzheimer's disease (Aβ1-40), based on a set of experimental constraints from solid state NMR spectroscopy. The model additionally incorporates the cross-β structural motif established b...
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Published in: | Proceedings of the National Academy of Sciences - PNAS 2002-12, Vol.99 (26), p.16742-16747 |
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description | We present a structural model for amyloid fibrils formed by the 40-residue β-amyloid peptide associated with Alzheimer's disease (Aβ1-40), based on a set of experimental constraints from solid state NMR spectroscopy. The model additionally incorporates the cross-β structural motif established by x-ray fiber diffraction and satisfies constraints on Aβ1-40fibril dimensions and mass-per-length determined from electron microscopy. Approximately the first 10 residues of Aβ1-40are structurally disordered in the fibrils. Residues 12-24 and 30-40 adopt β-strand conformations and form parallel β-sheets through intermolecular hydrogen bonding. Residues 25-29 contain a bend of the peptide backbone that brings the two β-sheets in contact through sidechain-sidechain interactions. A single cross-β unit is then a double-layered β-sheet structure with a hydrophobic core and one hydrophobic face. The only charged sidechains in the core are those of D23 and K28, which form salt bridges. Fibrils with minimum mass-per-length and diameter consist of two cross-β units with their hydrophobic faces juxtaposed. |
doi_str_mv | 10.1073/pnas.262663499 |
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The model additionally incorporates the cross-β structural motif established by x-ray fiber diffraction and satisfies constraints on Aβ1-40fibril dimensions and mass-per-length determined from electron microscopy. Approximately the first 10 residues of Aβ1-40are structurally disordered in the fibrils. Residues 12-24 and 30-40 adopt β-strand conformations and form parallel β-sheets through intermolecular hydrogen bonding. Residues 25-29 contain a bend of the peptide backbone that brings the two β-sheets in contact through sidechain-sidechain interactions. A single cross-β unit is then a double-layered β-sheet structure with a hydrophobic core and one hydrophobic face. The only charged sidechains in the core are those of D23 and K28, which form salt bridges. Fibrils with minimum mass-per-length and diameter consist of two cross-β units with their hydrophobic faces juxtaposed.</description><identifier>ISSN: 0027-8424</identifier><identifier>ISSN: 1091-6490</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.262663499</identifier><identifier>PMID: 12481027</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Alzheimer's disease ; Alzheimers disease ; Amino Acid Sequence ; Amyloid beta-Peptides - chemistry ; Amyloids ; Biochemistry ; Biological Sciences ; Biophysics ; Chemical equilibrium ; Chemistry of Interfaces ; Disease models ; Electrostatics ; Gränsytors kemi ; Humans ; Models, Molecular ; Molecular Sequence Data ; Molecular structure ; NMR ; Nuclear magnetic resonance ; Nuclear Magnetic Resonance, Biomolecular ; Peptide Fragments - chemistry ; Peptides ; Protein Structure, Secondary ; Salts ; Solar fibrils ; Spectral correlation</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2002-12, Vol.99 (26), p.16742-16747</ispartof><rights>Copyright 1993-2002 National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Dec 24, 2002</rights><rights>Copyright © 2002, The National Academy of Sciences 2002</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c527t-32539837f74050d59dd4230b4955159de0fc1c88a3da0dfdcf916d4c7a8f8e963</citedby><cites>FETCH-LOGICAL-c527t-32539837f74050d59dd4230b4955159de0fc1c88a3da0dfdcf916d4c7a8f8e963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/99/26.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/3074008$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/3074008$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793,58238,58471</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12481027$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:ltu:diva-12339$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Petkova, Aneta T.</creatorcontrib><creatorcontrib>Ishii, Yoshitaka</creatorcontrib><creatorcontrib>Balbach, John J.</creatorcontrib><creatorcontrib>Antzutkin, Oleg N.</creatorcontrib><creatorcontrib>Leapman, Richard D.</creatorcontrib><creatorcontrib>Delaglio, Frank</creatorcontrib><creatorcontrib>Tycko, Robert</creatorcontrib><title>A Structural Model for Alzheimer's β-Amyloid Fibrils Based on Experimental Constraints from Solid State NMR</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>We present a structural model for amyloid fibrils formed by the 40-residue β-amyloid peptide associated with Alzheimer's disease (Aβ1-40), based on a set of experimental constraints from solid state NMR spectroscopy. The model additionally incorporates the cross-β structural motif established by x-ray fiber diffraction and satisfies constraints on Aβ1-40fibril dimensions and mass-per-length determined from electron microscopy. Approximately the first 10 residues of Aβ1-40are structurally disordered in the fibrils. Residues 12-24 and 30-40 adopt β-strand conformations and form parallel β-sheets through intermolecular hydrogen bonding. Residues 25-29 contain a bend of the peptide backbone that brings the two β-sheets in contact through sidechain-sidechain interactions. A single cross-β unit is then a double-layered β-sheet structure with a hydrophobic core and one hydrophobic face. The only charged sidechains in the core are those of D23 and K28, which form salt bridges. Fibrils with minimum mass-per-length and diameter consist of two cross-β units with their hydrophobic faces juxtaposed.</description><subject>Alzheimer's disease</subject><subject>Alzheimers disease</subject><subject>Amino Acid Sequence</subject><subject>Amyloid beta-Peptides - chemistry</subject><subject>Amyloids</subject><subject>Biochemistry</subject><subject>Biological Sciences</subject><subject>Biophysics</subject><subject>Chemical equilibrium</subject><subject>Chemistry of Interfaces</subject><subject>Disease models</subject><subject>Electrostatics</subject><subject>Gränsytors kemi</subject><subject>Humans</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Molecular structure</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>Nuclear Magnetic Resonance, Biomolecular</subject><subject>Peptide Fragments - chemistry</subject><subject>Peptides</subject><subject>Protein Structure, Secondary</subject><subject>Salts</subject><subject>Solar fibrils</subject><subject>Spectral correlation</subject><issn>0027-8424</issn><issn>1091-6490</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNp9kc1uEzEUhS0EoiGwZYXAYlFYMME_M2N7wWIaWkBqQSLA1nLGdjuRZ5zaHmh5LB6EZ8JRQqAsWFnW_c718TkAPMRohhGjL9eDijNSk7qmpRC3wAQjgYu6FOg2mCBEWMFLUh6AezGuEEKi4uguOMCk5DgPJ8A1cJHC2KYxKAfPvDYOWh9g475fmK434VmEP38UTX_tfKfhSbcMnYvwSEWjoR_g8dXahMwNKcvnfogpqG5IEdrge7jwLosWSSUD3599vA_uWOWiebA7p-DzyfGn-dvi9MObd_PmtGgrwlJBSUUFp8yyElVIV0LrklC0LEVV4XwzyLa45VxRrZC2urUC17psmeKWG1HTKXix3Ru_mfW4lOvsUIVr6VUnX3dfGunDuXRplJhQKjL-aotntje6zZ_JYdxQ3ZwM3YU8918lpoLgMusPd_rgL0cTk-y72Brn1GD8GCUjTHDONw89_Qdc-TEMOQpJUF7GRPYzBbMt1AYfYzB2bwQjuelcbjqX-86z4PHf9v_gu5Iz8GQHbIS_x0LkHRLXLGc7Bc__T0g7OpfMVcrooy26ismHPUtRLgtx-gtbTstI</recordid><startdate>20021224</startdate><enddate>20021224</enddate><creator>Petkova, Aneta T.</creator><creator>Ishii, Yoshitaka</creator><creator>Balbach, John J.</creator><creator>Antzutkin, Oleg N.</creator><creator>Leapman, Richard D.</creator><creator>Delaglio, Frank</creator><creator>Tycko, Robert</creator><general>National Academy of Sciences</general><general>National Acad Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>ADTPV</scope><scope>AOWAS</scope><scope>D8T</scope><scope>ZZAVC</scope></search><sort><creationdate>20021224</creationdate><title>A Structural Model for Alzheimer's β-Amyloid Fibrils Based on Experimental Constraints from Solid State NMR</title><author>Petkova, Aneta T. ; 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The model additionally incorporates the cross-β structural motif established by x-ray fiber diffraction and satisfies constraints on Aβ1-40fibril dimensions and mass-per-length determined from electron microscopy. Approximately the first 10 residues of Aβ1-40are structurally disordered in the fibrils. Residues 12-24 and 30-40 adopt β-strand conformations and form parallel β-sheets through intermolecular hydrogen bonding. Residues 25-29 contain a bend of the peptide backbone that brings the two β-sheets in contact through sidechain-sidechain interactions. A single cross-β unit is then a double-layered β-sheet structure with a hydrophobic core and one hydrophobic face. The only charged sidechains in the core are those of D23 and K28, which form salt bridges. Fibrils with minimum mass-per-length and diameter consist of two cross-β units with their hydrophobic faces juxtaposed.</abstract><cop>United States</cop><pub>National Academy of Sciences</pub><pmid>12481027</pmid><doi>10.1073/pnas.262663499</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alzheimer's disease Alzheimers disease Amino Acid Sequence Amyloid beta-Peptides - chemistry Amyloids Biochemistry Biological Sciences Biophysics Chemical equilibrium Chemistry of Interfaces Disease models Electrostatics Gränsytors kemi Humans Models, Molecular Molecular Sequence Data Molecular structure NMR Nuclear magnetic resonance Nuclear Magnetic Resonance, Biomolecular Peptide Fragments - chemistry Peptides Protein Structure, Secondary Salts Solar fibrils Spectral correlation |
title | A Structural Model for Alzheimer's β-Amyloid Fibrils Based on Experimental Constraints from Solid State NMR |
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