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Use of bacterial communities to assess the ecological health of a recently restored stream
We assess the utility of bacterial community data for providing an indication of stream health in a recently 'restored' urban stream. A community DNA fingerprinting technique was used to characterise the bacterial community within Okeover Stream, and a lesser impacted, nearby stream. No si...
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Published in: | New Zealand journal of marine and freshwater research 2012-09, Vol.46 (3), p.291-301 |
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container_title | New Zealand journal of marine and freshwater research |
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creator | Lear, G Ancion, P-Y Harding, J Lewis, GD |
description | We assess the utility of bacterial community data for providing an indication of stream health in a recently 'restored' urban stream. A community DNA fingerprinting technique was used to characterise the bacterial community within Okeover Stream, and a lesser impacted, nearby stream. No significant differences in bacterial community structure were detected between streams. However, further investigation revealed highly elevated levels of Zn, Pb and Cu associated with microbial biofilms in Okeover Stream and an increased abundance of genes encoding for bacterial resistance to Co, Zn and Cd. Benthic invertebrates were also sampled, confirming that despite recent attempts at stream restoration, the ecological health of the Okeover Stream remains poor. While the analysis of macroinvertebrate communities appeared to provide a more informative measure of overall stream health, we show that the targeted analysis of bacterial functional genes can be used to identify possible causes of declining ecological health. |
doi_str_mv | 10.1080/00288330.2011.638647 |
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A community DNA fingerprinting technique was used to characterise the bacterial community within Okeover Stream, and a lesser impacted, nearby stream. No significant differences in bacterial community structure were detected between streams. However, further investigation revealed highly elevated levels of Zn, Pb and Cu associated with microbial biofilms in Okeover Stream and an increased abundance of genes encoding for bacterial resistance to Co, Zn and Cd. Benthic invertebrates were also sampled, confirming that despite recent attempts at stream restoration, the ecological health of the Okeover Stream remains poor. While the analysis of macroinvertebrate communities appeared to provide a more informative measure of overall stream health, we show that the targeted analysis of bacterial functional genes can be used to identify possible causes of declining ecological health.</description><subject>ARISA</subject><subject>Bacteria</subject><subject>Community</subject><subject>Freshwater</subject><subject>Marine</subject><subject>microbial communities</subject><subject>Microbiology</subject><subject>Multivariate analysis</subject><subject>stormwater</subject><subject>stream biofilm</subject><issn>0028-8330</issn><issn>1175-8805</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNp9kL1PwzAQxS0EEuXjP2CwxMKSco7jxJkQqviSKrHQhcVynQtN5cTFdoT63-OosDAw3Tvp907vHiFXDOYMJNwC5FJyDvMcGJuXXJZFdURmjFUikxLEMZlNSDYxp-QshG1ay6LOZ-R9FZC6lq61ieg7balxfT8OXeww0OioDgFDUhukaJx1H51J0Aa1jZvJqKlHg0O0-yRCdB4bGqJH3V-Qk1bbgJc_85ysHh_eFs_Z8vXpZXG_zAwvZcwwJYQa1lJXEgzURhScsZIXXAgtal5XvMlNsxZtbkqQSTXABaSHGTaCG35Obg53d959jimD6rtg0Fo9oBuDYrmoqrooakjo9R9060Y_pHSKMcGklIJNVHGgjHcheGzVzne99nvFQE2Fq9_C1VS4OhSebHcHWze0zvf6y3nbqKj31vnW68F0QfF_L3wDkOGFvA</recordid><startdate>20120901</startdate><enddate>20120901</enddate><creator>Lear, G</creator><creator>Ancion, P-Y</creator><creator>Harding, J</creator><creator>Lewis, GD</creator><general>Taylor & Francis Group</general><general>Taylor & Francis Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7TN</scope><scope>7U7</scope><scope>7UA</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>H96</scope><scope>L.G</scope><scope>M7N</scope><scope>SOI</scope><scope>7QH</scope><scope>7QL</scope><scope>7T2</scope><scope>7U2</scope><scope>H97</scope></search><sort><creationdate>20120901</creationdate><title>Use of bacterial communities to assess the ecological health of a recently restored stream</title><author>Lear, G ; Ancion, P-Y ; Harding, J ; Lewis, GD</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c368t-e880090b8a780c09c54311634355a593973d2cdb5f2c608cdbd03508831ed53c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>ARISA</topic><topic>Bacteria</topic><topic>Community</topic><topic>Freshwater</topic><topic>Marine</topic><topic>microbial communities</topic><topic>Microbiology</topic><topic>Multivariate analysis</topic><topic>stormwater</topic><topic>stream biofilm</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lear, G</creatorcontrib><creatorcontrib>Ancion, P-Y</creatorcontrib><creatorcontrib>Harding, J</creatorcontrib><creatorcontrib>Lewis, GD</creatorcontrib><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Environment Abstracts</collection><collection>Aqualine</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Safety Science and Risk</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><jtitle>New Zealand journal of marine and freshwater research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lear, G</au><au>Ancion, P-Y</au><au>Harding, J</au><au>Lewis, GD</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Use of bacterial communities to assess the ecological health of a recently restored stream</atitle><jtitle>New Zealand journal of marine and freshwater research</jtitle><date>2012-09-01</date><risdate>2012</risdate><volume>46</volume><issue>3</issue><spage>291</spage><epage>301</epage><pages>291-301</pages><issn>0028-8330</issn><eissn>1175-8805</eissn><abstract>We assess the utility of bacterial community data for providing an indication of stream health in a recently 'restored' urban stream. 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subjects | ARISA Bacteria Community Freshwater Marine microbial communities Microbiology Multivariate analysis stormwater stream biofilm |
title | Use of bacterial communities to assess the ecological health of a recently restored stream |
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