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New insights into the heterogeneous ripening in Hass avocado via LC–MS/MS proteomics
•Gel-free proteomics discriminated between ripening avocado phenotypes.•Sugar and amino nucleotide proteins were more abundant in slow ripening fruit.•Protein synthesis, translation and folding were altered in slow ripening avocados.•Slow ripening fruit displayed higher abundance of proteins involve...
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Published in: | Postharvest biology and technology 2017-10, Vol.132, p.51-61 |
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description | •Gel-free proteomics discriminated between ripening avocado phenotypes.•Sugar and amino nucleotide proteins were more abundant in slow ripening fruit.•Protein synthesis, translation and folding were altered in slow ripening avocados.•Slow ripening fruit displayed higher abundance of proteins involved in proteolysis.
Hass avocado postharvest ripening heterogeneity creates several logistics problems at destination markets. Although several approaches mainly based on targeted analysis have been undertaken to broaden our understanding of the potential causes of this postharvest ripening heterogeneity, still the secret is not yet unveiled. In this study biopsies from individual fruit displaying contrasting ripening behavior (slow vs fast) and subjected to different storage conditions (immediately after harvest, 30 d regular air at 5°C and 30 d at 5°C and 4kPa O2 and 6kPa CO2) were analyzed for targeted fatty acid analysis and cell wall enzyme activity combined with a more integrative approach based on gel free proteomics LC–MS/MS. The high throughput proteomics was capable of discriminating between slow and fast ripening avocado fruit. Proteins that were mainly less abundant in the slow ripening phenotype were annotated to correct protein folding, translation and de novo synthesis and higher abundant proteins were annotated to amino sugar and nucleotide metabolism, detoxification and stress response and proteolysis. Our study opens new insights into the causes of heterogeneous ripening and may provide new markers for avocado ripening at harvest and after prolonged storage. |
doi_str_mv | 10.1016/j.postharvbio.2017.06.001 |
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Hass avocado postharvest ripening heterogeneity creates several logistics problems at destination markets. Although several approaches mainly based on targeted analysis have been undertaken to broaden our understanding of the potential causes of this postharvest ripening heterogeneity, still the secret is not yet unveiled. In this study biopsies from individual fruit displaying contrasting ripening behavior (slow vs fast) and subjected to different storage conditions (immediately after harvest, 30 d regular air at 5°C and 30 d at 5°C and 4kPa O2 and 6kPa CO2) were analyzed for targeted fatty acid analysis and cell wall enzyme activity combined with a more integrative approach based on gel free proteomics LC–MS/MS. The high throughput proteomics was capable of discriminating between slow and fast ripening avocado fruit. Proteins that were mainly less abundant in the slow ripening phenotype were annotated to correct protein folding, translation and de novo synthesis and higher abundant proteins were annotated to amino sugar and nucleotide metabolism, detoxification and stress response and proteolysis. Our study opens new insights into the causes of heterogeneous ripening and may provide new markers for avocado ripening at harvest and after prolonged storage.</description><identifier>ISSN: 0925-5214</identifier><identifier>EISSN: 1873-2356</identifier><identifier>DOI: 10.1016/j.postharvbio.2017.06.001</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Carbon dioxide ; Cell wall enzymes ; Cell walls ; Detoxification ; Enzymatic activity ; Enzyme activity ; Fatty acids ; Fruits ; Gel-free proteomics ; Harvest ; Heterogeneity ; Logistics ; Metabolism ; Navigation behavior ; Persea americana ; Protein folding ; Proteins ; Proteolysis ; Proteomics ; Ripening ; Storage ; Storage conditions ; Sugar</subject><ispartof>Postharvest biology and technology, 2017-10, Vol.132, p.51-61</ispartof><rights>2017 Elsevier B.V.</rights><rights>Copyright Elsevier BV Oct 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c349t-1c4d1e1eddc2767a229cf4464a9fe8fd8fb578bd240bab8168a64a554482f2063</citedby><cites>FETCH-LOGICAL-c349t-1c4d1e1eddc2767a229cf4464a9fe8fd8fb578bd240bab8168a64a554482f2063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Fuentealba, Claudia</creatorcontrib><creatorcontrib>Hernández, Ignacia</creatorcontrib><creatorcontrib>Olaeta, J.A.</creatorcontrib><creatorcontrib>Defilippi, Bruno</creatorcontrib><creatorcontrib>Meneses, Claudio</creatorcontrib><creatorcontrib>Campos, Reinaldo</creatorcontrib><creatorcontrib>Lurie, Susan</creatorcontrib><creatorcontrib>Carpentier, Sebastien</creatorcontrib><creatorcontrib>Pedreschi, Romina</creatorcontrib><title>New insights into the heterogeneous ripening in Hass avocado via LC–MS/MS proteomics</title><title>Postharvest biology and technology</title><description>•Gel-free proteomics discriminated between ripening avocado phenotypes.•Sugar and amino nucleotide proteins were more abundant in slow ripening fruit.•Protein synthesis, translation and folding were altered in slow ripening avocados.•Slow ripening fruit displayed higher abundance of proteins involved in proteolysis.
Hass avocado postharvest ripening heterogeneity creates several logistics problems at destination markets. Although several approaches mainly based on targeted analysis have been undertaken to broaden our understanding of the potential causes of this postharvest ripening heterogeneity, still the secret is not yet unveiled. In this study biopsies from individual fruit displaying contrasting ripening behavior (slow vs fast) and subjected to different storage conditions (immediately after harvest, 30 d regular air at 5°C and 30 d at 5°C and 4kPa O2 and 6kPa CO2) were analyzed for targeted fatty acid analysis and cell wall enzyme activity combined with a more integrative approach based on gel free proteomics LC–MS/MS. The high throughput proteomics was capable of discriminating between slow and fast ripening avocado fruit. Proteins that were mainly less abundant in the slow ripening phenotype were annotated to correct protein folding, translation and de novo synthesis and higher abundant proteins were annotated to amino sugar and nucleotide metabolism, detoxification and stress response and proteolysis. Our study opens new insights into the causes of heterogeneous ripening and may provide new markers for avocado ripening at harvest and after prolonged storage.</description><subject>Carbon dioxide</subject><subject>Cell wall enzymes</subject><subject>Cell walls</subject><subject>Detoxification</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Fatty acids</subject><subject>Fruits</subject><subject>Gel-free proteomics</subject><subject>Harvest</subject><subject>Heterogeneity</subject><subject>Logistics</subject><subject>Metabolism</subject><subject>Navigation behavior</subject><subject>Persea americana</subject><subject>Protein folding</subject><subject>Proteins</subject><subject>Proteolysis</subject><subject>Proteomics</subject><subject>Ripening</subject><subject>Storage</subject><subject>Storage conditions</subject><subject>Sugar</subject><issn>0925-5214</issn><issn>1873-2356</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNqNkL1OwzAQxy0EEqXwDkbMSW3HdpIRVUCRWhgKrJbjXFpXNC62W8TGO_CGPAmuysDIdCfd_0P3Q-iSkpwSKkerfONCXGq_a6zLGaFlTmROCD1CA1qVRcYKIY_RgNRMZIJRforOQlgRQoQQ1QC9PMA7tn2wi2UMaYkOxyXgJUTwbgE9uG3A3m6gt_0i3fFEh4D1zhndOryzGk_H359fs_loNscb7yK4tTXhHJ10-jXAxe8coufbm6fxJJs-3t2Pr6eZKXgdM2p4S4FC2xpWylIzVpuOc8l13UHVtVXXiLJqWsZJo5uKykqnmxCcV6xjRBZDdHXITdVvWwhRrdzW96lS0ZqXpBSyLpOqPqiMdyF46NTG27X2H4oStceoVuoPRrXHqIhUCWPyjg9eSG_sLHgVjIXeQGs9mKhaZ_-R8gP5WIMZ</recordid><startdate>201710</startdate><enddate>201710</enddate><creator>Fuentealba, Claudia</creator><creator>Hernández, Ignacia</creator><creator>Olaeta, J.A.</creator><creator>Defilippi, Bruno</creator><creator>Meneses, Claudio</creator><creator>Campos, Reinaldo</creator><creator>Lurie, Susan</creator><creator>Carpentier, Sebastien</creator><creator>Pedreschi, Romina</creator><general>Elsevier B.V</general><general>Elsevier BV</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>7SS</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope></search><sort><creationdate>201710</creationdate><title>New insights into the heterogeneous ripening in Hass avocado via LC–MS/MS proteomics</title><author>Fuentealba, Claudia ; Hernández, Ignacia ; Olaeta, J.A. ; Defilippi, Bruno ; Meneses, Claudio ; Campos, Reinaldo ; Lurie, Susan ; Carpentier, Sebastien ; Pedreschi, Romina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c349t-1c4d1e1eddc2767a229cf4464a9fe8fd8fb578bd240bab8168a64a554482f2063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Carbon dioxide</topic><topic>Cell wall enzymes</topic><topic>Cell walls</topic><topic>Detoxification</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Fatty acids</topic><topic>Fruits</topic><topic>Gel-free proteomics</topic><topic>Harvest</topic><topic>Heterogeneity</topic><topic>Logistics</topic><topic>Metabolism</topic><topic>Navigation behavior</topic><topic>Persea americana</topic><topic>Protein folding</topic><topic>Proteins</topic><topic>Proteolysis</topic><topic>Proteomics</topic><topic>Ripening</topic><topic>Storage</topic><topic>Storage conditions</topic><topic>Sugar</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fuentealba, Claudia</creatorcontrib><creatorcontrib>Hernández, Ignacia</creatorcontrib><creatorcontrib>Olaeta, J.A.</creatorcontrib><creatorcontrib>Defilippi, Bruno</creatorcontrib><creatorcontrib>Meneses, Claudio</creatorcontrib><creatorcontrib>Campos, Reinaldo</creatorcontrib><creatorcontrib>Lurie, Susan</creatorcontrib><creatorcontrib>Carpentier, Sebastien</creatorcontrib><creatorcontrib>Pedreschi, Romina</creatorcontrib><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Postharvest biology and technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fuentealba, Claudia</au><au>Hernández, Ignacia</au><au>Olaeta, J.A.</au><au>Defilippi, Bruno</au><au>Meneses, Claudio</au><au>Campos, Reinaldo</au><au>Lurie, Susan</au><au>Carpentier, Sebastien</au><au>Pedreschi, Romina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>New insights into the heterogeneous ripening in Hass avocado via LC–MS/MS proteomics</atitle><jtitle>Postharvest biology and technology</jtitle><date>2017-10</date><risdate>2017</risdate><volume>132</volume><spage>51</spage><epage>61</epage><pages>51-61</pages><issn>0925-5214</issn><eissn>1873-2356</eissn><abstract>•Gel-free proteomics discriminated between ripening avocado phenotypes.•Sugar and amino nucleotide proteins were more abundant in slow ripening fruit.•Protein synthesis, translation and folding were altered in slow ripening avocados.•Slow ripening fruit displayed higher abundance of proteins involved in proteolysis.
Hass avocado postharvest ripening heterogeneity creates several logistics problems at destination markets. Although several approaches mainly based on targeted analysis have been undertaken to broaden our understanding of the potential causes of this postharvest ripening heterogeneity, still the secret is not yet unveiled. In this study biopsies from individual fruit displaying contrasting ripening behavior (slow vs fast) and subjected to different storage conditions (immediately after harvest, 30 d regular air at 5°C and 30 d at 5°C and 4kPa O2 and 6kPa CO2) were analyzed for targeted fatty acid analysis and cell wall enzyme activity combined with a more integrative approach based on gel free proteomics LC–MS/MS. The high throughput proteomics was capable of discriminating between slow and fast ripening avocado fruit. Proteins that were mainly less abundant in the slow ripening phenotype were annotated to correct protein folding, translation and de novo synthesis and higher abundant proteins were annotated to amino sugar and nucleotide metabolism, detoxification and stress response and proteolysis. Our study opens new insights into the causes of heterogeneous ripening and may provide new markers for avocado ripening at harvest and after prolonged storage.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><doi>10.1016/j.postharvbio.2017.06.001</doi><tpages>11</tpages></addata></record> |
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subjects | Carbon dioxide Cell wall enzymes Cell walls Detoxification Enzymatic activity Enzyme activity Fatty acids Fruits Gel-free proteomics Harvest Heterogeneity Logistics Metabolism Navigation behavior Persea americana Protein folding Proteins Proteolysis Proteomics Ripening Storage Storage conditions Sugar |
title | New insights into the heterogeneous ripening in Hass avocado via LC–MS/MS proteomics |
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