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Gene Expression in Leishmania: Analysis of Essential 5' DNA Sequences
A major unanswered question in Kinetoplastida parasites is the mechanism of regulating gene expression. Using a transfection system, we have previously shown that the intergenic region of the α-tubulin gene of Leishmania enriettii contained sequences required for gene expression. The goal of the wor...
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Published in: | Proceedings of the National Academy of Sciences - PNAS 1992-04, Vol.89 (7), p.2703-2707 |
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description | A major unanswered question in Kinetoplastida parasites is the mechanism of regulating gene expression. Using a transfection system, we have previously shown that the intergenic region of the α-tubulin gene of Leishmania enriettii contained sequences required for gene expression. The goal of the work reported here was to determine whether the Leishmania-derived sequences were providing transcriptional control signals or functioning at a post-transcriptional level, most likely in trans-splicing. The chloramphenicol acetyltransferase (cat) gene was used as the reporter gene and was stably introduced into L. enriettii as part of an extrachromosomal element by transfection. We show here that the production of cat mRNA was dramatically dependent on the presence of the intergenic region 5' to the cat gene. The intergenic region could be substituted by a smaller fragment (222 base pairs) that contained the trans-splice acceptor site and an adjacent polypyrimidine tract. This native fragment could be replaced by a synthetic polypyrimidine tract containing an AG site. The native and the synthetic fragments had unidirectional activity. No effect on transcription of the cat gene by the wild-type fragment or the synthetic polypyrimidine was detected. The results indicate that both regions contain signals that affect RNA stability, probably sequences involved in trans-splicing. |
doi_str_mv | 10.1073/pnas.89.7.2703 |
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Curotto de Lafaille ; Laban, Avraham ; Wirth, Dyann F.</creator><creatorcontrib>Maria A. Curotto de Lafaille ; Laban, Avraham ; Wirth, Dyann F.</creatorcontrib><description>A major unanswered question in Kinetoplastida parasites is the mechanism of regulating gene expression. Using a transfection system, we have previously shown that the intergenic region of the α-tubulin gene of Leishmania enriettii contained sequences required for gene expression. The goal of the work reported here was to determine whether the Leishmania-derived sequences were providing transcriptional control signals or functioning at a post-transcriptional level, most likely in trans-splicing. The chloramphenicol acetyltransferase (cat) gene was used as the reporter gene and was stably introduced into L. enriettii as part of an extrachromosomal element by transfection. We show here that the production of cat mRNA was dramatically dependent on the presence of the intergenic region 5' to the cat gene. The intergenic region could be substituted by a smaller fragment (222 base pairs) that contained the trans-splice acceptor site and an adjacent polypyrimidine tract. This native fragment could be replaced by a synthetic polypyrimidine tract containing an AG site. The native and the synthetic fragments had unidirectional activity. No effect on transcription of the cat gene by the wild-type fragment or the synthetic polypyrimidine was detected. The results indicate that both regions contain signals that affect RNA stability, probably sequences involved in trans-splicing.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.89.7.2703</identifier><identifier>PMID: 1557376</identifier><identifier>CODEN: PNASA6</identifier><language>eng</language><publisher>Washington, DC: National Academy of Sciences of the United States of America</publisher><subject>Animals ; Base Sequence ; Biological and medical sciences ; Cell lines ; Deoxyribonucleic acid ; DNA ; DNA, Protozoan - genetics ; Fundamental and applied biological sciences. Psychology ; Gene expression ; Gene Expression Regulation ; Genes ; Genetics ; Intergenic DNA ; Leishmania - genetics ; Messenger RNA ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Oligodeoxyribonucleotides - chemistry ; Parasites ; Plasmids ; Polymerase chain reaction ; Regulatory Sequences, Nucleic Acid ; RNA ; RNA Splicing ; RNA, Messenger - genetics ; RNA, Protozoan - genetics ; Trans splicing ; Transcription, Genetic ; Tubulin - genetics</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 1992-04, Vol.89 (7), p.2703-2707</ispartof><rights>Copyright 1992 The National Academy of Sciences of the United States of America</rights><rights>1992 INIST-CNRS</rights><rights>Copyright National Academy of Sciences Apr 1, 1992</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c544t-2f1ff8674853554f699e809460cd8db571562710066cb727a19800f7a2d2a5d13</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/89/7.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/2358960$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/2358960$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793,58238,58471</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=5226784$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/1557376$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maria A. Curotto de Lafaille</creatorcontrib><creatorcontrib>Laban, Avraham</creatorcontrib><creatorcontrib>Wirth, Dyann F.</creatorcontrib><title>Gene Expression in Leishmania: Analysis of Essential 5' DNA Sequences</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>A major unanswered question in Kinetoplastida parasites is the mechanism of regulating gene expression. Using a transfection system, we have previously shown that the intergenic region of the α-tubulin gene of Leishmania enriettii contained sequences required for gene expression. The goal of the work reported here was to determine whether the Leishmania-derived sequences were providing transcriptional control signals or functioning at a post-transcriptional level, most likely in trans-splicing. The chloramphenicol acetyltransferase (cat) gene was used as the reporter gene and was stably introduced into L. enriettii as part of an extrachromosomal element by transfection. We show here that the production of cat mRNA was dramatically dependent on the presence of the intergenic region 5' to the cat gene. The intergenic region could be substituted by a smaller fragment (222 base pairs) that contained the trans-splice acceptor site and an adjacent polypyrimidine tract. This native fragment could be replaced by a synthetic polypyrimidine tract containing an AG site. The native and the synthetic fragments had unidirectional activity. No effect on transcription of the cat gene by the wild-type fragment or the synthetic polypyrimidine was detected. 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Psychology</subject><subject>Gene expression</subject><subject>Gene Expression Regulation</subject><subject>Genes</subject><subject>Genetics</subject><subject>Intergenic DNA</subject><subject>Leishmania - genetics</subject><subject>Messenger RNA</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Oligodeoxyribonucleotides - chemistry</subject><subject>Parasites</subject><subject>Plasmids</subject><subject>Polymerase chain reaction</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>RNA</subject><subject>RNA Splicing</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Protozoan - genetics</subject><subject>Trans splicing</subject><subject>Transcription, Genetic</subject><subject>Tubulin - genetics</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1992</creationdate><recordtype>article</recordtype><recordid>eNqFkc2P0zAQxS0EWsrClRNIEULLKWXsxF-IS7WUBamCA3C23MRmXaVO15Og3f8eVymlcICTD-83b57fEPKUwpyCrF7vosW50nM5ZxKqe2RGQdNS1BrukxkAk6WqWf2QPELcAIDmCs7IGeVcVlLMyPLKRVcsb3fJIYY-FiEWKxfwemtjsG-KRbTdHQYsel8sEV0cgu0K_qp492lRfHE3o4uNw8fkgbcduieH95x8e7_8evmhXH2--ni5WJUNr-uhZJ56r4SsFa84r73Q2inQtYCmVe2aS8oFkxRAiGYtmbRUKwAvLWuZ5S2tzsnbyXc3rreubXKcZDuzS2Fr053pbTB_KjFcm-_9D1MrWUEevziMpz4nx8FsAzau62x0_YhGMiXzRvFfkIqcNNedwRd_gZt-TLkzNAwoyx0zlaH5BDWpR0zOHwNTMPsjmv0RjdJGGja5Pj_95m98ulrWXx50i43tfLKxCXjEOGNCqvrEZm__Sz1dc_Ev3fix6wZ3O2Tw2QRucOjTkWQVV1pA9RO3ccNq</recordid><startdate>19920401</startdate><enddate>19920401</enddate><creator>Maria A. 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Curotto de Lafaille ; Laban, Avraham ; Wirth, Dyann F.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c544t-2f1ff8674853554f699e809460cd8db571562710066cb727a19800f7a2d2a5d13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1992</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Cell lines</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Protozoan - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene expression</topic><topic>Gene Expression Regulation</topic><topic>Genes</topic><topic>Genetics</topic><topic>Intergenic DNA</topic><topic>Leishmania - genetics</topic><topic>Messenger RNA</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>Oligodeoxyribonucleotides - chemistry</topic><topic>Parasites</topic><topic>Plasmids</topic><topic>Polymerase chain reaction</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>RNA</topic><topic>RNA Splicing</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Protozoan - genetics</topic><topic>Trans splicing</topic><topic>Transcription, Genetic</topic><topic>Tubulin - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maria A. 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Curotto de Lafaille</au><au>Laban, Avraham</au><au>Wirth, Dyann F.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Gene Expression in Leishmania: Analysis of Essential 5' DNA Sequences</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>1992-04-01</date><risdate>1992</risdate><volume>89</volume><issue>7</issue><spage>2703</spage><epage>2707</epage><pages>2703-2707</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><coden>PNASA6</coden><abstract>A major unanswered question in Kinetoplastida parasites is the mechanism of regulating gene expression. Using a transfection system, we have previously shown that the intergenic region of the α-tubulin gene of Leishmania enriettii contained sequences required for gene expression. The goal of the work reported here was to determine whether the Leishmania-derived sequences were providing transcriptional control signals or functioning at a post-transcriptional level, most likely in trans-splicing. The chloramphenicol acetyltransferase (cat) gene was used as the reporter gene and was stably introduced into L. enriettii as part of an extrachromosomal element by transfection. We show here that the production of cat mRNA was dramatically dependent on the presence of the intergenic region 5' to the cat gene. The intergenic region could be substituted by a smaller fragment (222 base pairs) that contained the trans-splice acceptor site and an adjacent polypyrimidine tract. This native fragment could be replaced by a synthetic polypyrimidine tract containing an AG site. The native and the synthetic fragments had unidirectional activity. No effect on transcription of the cat gene by the wild-type fragment or the synthetic polypyrimidine was detected. The results indicate that both regions contain signals that affect RNA stability, probably sequences involved in trans-splicing.</abstract><cop>Washington, DC</cop><pub>National Academy of Sciences of the United States of America</pub><pmid>1557376</pmid><doi>10.1073/pnas.89.7.2703</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Base Sequence Biological and medical sciences Cell lines Deoxyribonucleic acid DNA DNA, Protozoan - genetics Fundamental and applied biological sciences. Psychology Gene expression Gene Expression Regulation Genes Genetics Intergenic DNA Leishmania - genetics Messenger RNA Molecular and cellular biology Molecular genetics Molecular Sequence Data Oligodeoxyribonucleotides - chemistry Parasites Plasmids Polymerase chain reaction Regulatory Sequences, Nucleic Acid RNA RNA Splicing RNA, Messenger - genetics RNA, Protozoan - genetics Trans splicing Transcription, Genetic Tubulin - genetics |
title | Gene Expression in Leishmania: Analysis of Essential 5' DNA Sequences |
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