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The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection
Background: Single nucleotide polymorphisms (SNPs) of Toll-like receptors (TLRs) are linked with functional modification of cytokine responses. In chronic hepatitis C virus (HCV) infection, studies of TLR polymorphisms have primarily targeted receptor pathways implicated in viral immune responses. W...
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Published in: | British journal of biomedical science 2018-10, Vol.75 (4), p.175-181 |
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creator | El-Bendary, M Neamatallah, M Elalfy, H Besheer, T Elkholi, A El-Diasty, M Elsareef, M Zahran, M El-Aarag, B Gomaa, A Elhammady, D El-Setouhy, M Hegazy, A Esmat, G |
description | Background: Single nucleotide polymorphisms (SNPs) of Toll-like receptors (TLRs) are linked with functional modification of cytokine responses. In chronic hepatitis C virus (HCV) infection, studies of TLR polymorphisms have primarily targeted receptor pathways implicated in viral immune responses. We hypothesized that one or more variant(s) of TLR3, TLR7 and TLR8 are associated with different outcomes of HCV infection.
Materials & methods: A total of 3368 subjects from 850 families were recruited and divided into three main groups categorized as chronic HCV CHC spontaneous viral clearance (SVC), and controls. All individuals were genotyped for three SNPs for TLR3, two SNPs for TLR7, and two SNPs for TLR8 using allelic discrimination real-time PCR.
Results: Carriage of the C allele in three SNPs of TLR3 (rs3775290, rs3775291, and rs5743312), the C allele in TLR7 (rs3853839) in females only, and the C allele in TLR8 (rs3764879) in males only were significantly higher in SVC group than CHC group (P < 0.001), while carriage of the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both males and females were significantly higher in CHC infection more than SVC group (P < 0.001).
Conclusion: The C allele is protective of HCV in TLR3, TLR7 (rs3853839) in females only, and TLR8 (rs3764879) in males only, while risk of infection is linked to the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both sexes. |
doi_str_mv | 10.1080/09674845.2018.1492186 |
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Materials & methods: A total of 3368 subjects from 850 families were recruited and divided into three main groups categorized as chronic HCV CHC spontaneous viral clearance (SVC), and controls. All individuals were genotyped for three SNPs for TLR3, two SNPs for TLR7, and two SNPs for TLR8 using allelic discrimination real-time PCR.
Results: Carriage of the C allele in three SNPs of TLR3 (rs3775290, rs3775291, and rs5743312), the C allele in TLR7 (rs3853839) in females only, and the C allele in TLR8 (rs3764879) in males only were significantly higher in SVC group than CHC group (P < 0.001), while carriage of the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both males and females were significantly higher in CHC infection more than SVC group (P < 0.001).
Conclusion: The C allele is protective of HCV in TLR3, TLR7 (rs3853839) in females only, and TLR8 (rs3764879) in males only, while risk of infection is linked to the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both sexes.</description><identifier>ISSN: 0967-4845</identifier><identifier>EISSN: 2474-0896</identifier><identifier>DOI: 10.1080/09674845.2018.1492186</identifier><identifier>PMID: 29947302</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Adult ; Alleles ; Chronic infection ; Female ; Females ; Genetic Association Studies ; genetic polymorphism ; Genetic Predisposition to Disease ; Genotype ; HCV ; Hepacivirus - genetics ; Hepacivirus - pathogenicity ; Hepatitis C ; Hepatitis C, Chronic - genetics ; Hepatitis C, Chronic - pathology ; Hepatitis C, Chronic - virology ; Humans ; Immune clearance ; Immune response ; Infections ; Interferon ; Male ; Males ; Middle Aged ; Polymorphism, Single Nucleotide - genetics ; Risk Factors ; sex-linked TLR ; Single-nucleotide polymorphism ; spontaneous clearance ; TLR3 protein ; TLR7 protein ; Toll-Like Receptor 3 - genetics ; Toll-Like Receptor 7 - genetics ; Toll-Like Receptor 8 - genetics ; Toll-like receptors</subject><ispartof>British journal of biomedical science, 2018-10, Vol.75 (4), p.175-181</ispartof><rights>2018 British Journal of Biomedical Science 2018</rights><rights>2018 British Journal of Biomedical Science</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c394t-c49b160443258b64a051a6dd3163969569b1fe1a1f4bc346bc98130b12e2e2953</citedby><cites>FETCH-LOGICAL-c394t-c49b160443258b64a051a6dd3163969569b1fe1a1f4bc346bc98130b12e2e2953</cites><orcidid>0000-0002-3751-5927 ; 0000-0002-5602-0989 ; 0000-0002-0583-8860 ; 0000-0001-6920-6849</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29947302$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>El-Bendary, M</creatorcontrib><creatorcontrib>Neamatallah, M</creatorcontrib><creatorcontrib>Elalfy, H</creatorcontrib><creatorcontrib>Besheer, T</creatorcontrib><creatorcontrib>Elkholi, A</creatorcontrib><creatorcontrib>El-Diasty, M</creatorcontrib><creatorcontrib>Elsareef, M</creatorcontrib><creatorcontrib>Zahran, M</creatorcontrib><creatorcontrib>El-Aarag, B</creatorcontrib><creatorcontrib>Gomaa, A</creatorcontrib><creatorcontrib>Elhammady, D</creatorcontrib><creatorcontrib>El-Setouhy, M</creatorcontrib><creatorcontrib>Hegazy, A</creatorcontrib><creatorcontrib>Esmat, G</creatorcontrib><title>The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection</title><title>British journal of biomedical science</title><addtitle>Br J Biomed Sci</addtitle><description>Background: Single nucleotide polymorphisms (SNPs) of Toll-like receptors (TLRs) are linked with functional modification of cytokine responses. In chronic hepatitis C virus (HCV) infection, studies of TLR polymorphisms have primarily targeted receptor pathways implicated in viral immune responses. We hypothesized that one or more variant(s) of TLR3, TLR7 and TLR8 are associated with different outcomes of HCV infection.
Materials & methods: A total of 3368 subjects from 850 families were recruited and divided into three main groups categorized as chronic HCV CHC spontaneous viral clearance (SVC), and controls. All individuals were genotyped for three SNPs for TLR3, two SNPs for TLR7, and two SNPs for TLR8 using allelic discrimination real-time PCR.
Results: Carriage of the C allele in three SNPs of TLR3 (rs3775290, rs3775291, and rs5743312), the C allele in TLR7 (rs3853839) in females only, and the C allele in TLR8 (rs3764879) in males only were significantly higher in SVC group than CHC group (P < 0.001), while carriage of the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both males and females were significantly higher in CHC infection more than SVC group (P < 0.001).
Conclusion: The C allele is protective of HCV in TLR3, TLR7 (rs3853839) in females only, and TLR8 (rs3764879) in males only, while risk of infection is linked to the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both sexes.</description><subject>Adult</subject><subject>Alleles</subject><subject>Chronic infection</subject><subject>Female</subject><subject>Females</subject><subject>Genetic Association Studies</subject><subject>genetic polymorphism</subject><subject>Genetic Predisposition to Disease</subject><subject>Genotype</subject><subject>HCV</subject><subject>Hepacivirus - genetics</subject><subject>Hepacivirus - pathogenicity</subject><subject>Hepatitis C</subject><subject>Hepatitis C, Chronic - genetics</subject><subject>Hepatitis C, Chronic - pathology</subject><subject>Hepatitis C, Chronic - virology</subject><subject>Humans</subject><subject>Immune clearance</subject><subject>Immune response</subject><subject>Infections</subject><subject>Interferon</subject><subject>Male</subject><subject>Males</subject><subject>Middle Aged</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Risk Factors</subject><subject>sex-linked TLR</subject><subject>Single-nucleotide polymorphism</subject><subject>spontaneous clearance</subject><subject>TLR3 protein</subject><subject>TLR7 protein</subject><subject>Toll-Like Receptor 3 - genetics</subject><subject>Toll-Like Receptor 7 - genetics</subject><subject>Toll-Like Receptor 8 - genetics</subject><subject>Toll-like receptors</subject><issn>0967-4845</issn><issn>2474-0896</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp9kc2KFDEUhYMoTjv6CErAjQurzV-lkp1Do44w4KZ1G1Kp1HTGVFImKYZ-Ix_TFN3jQga5i8A93733kAPAa4y2GAn0AUneMcHaLUFYbDGTBAv-BGwI61iDhORPwWZlmhW6AC9yvkMIS9Lx5-CCSMk6isgG_N4fLNQ5R-N0cTHAOMLswq23MCzG21jcYOEc_XGKaT64POUV2UfvG-9-WpissXOJCdL3j3U7qMPwmCDgrQ02w3tXDrBUE3nJq-R65105whLh9e4HdGG0ZjX2Ejwbtc_21fm9BN8_f9rvrpubb1--7q5uGkMlK41hssccMUZJK3rONGqx5sNAMaeSy5ZXebRY45H1hjLeGykwRT0mtpZs6SV4d9o7p_hrsbmoyVVj3utg45IVQRyJDjHBK_r2H_QuLilUd4pgyRDlpBOVak-USTHnZEc1JzfpdFQYqTVK9RClWqNU5yjr3Jvz9qWf7PB36iG7Cnw8AfWPYpr0fUx-UEUffUxj0sG4rOj_b_wBZKWuVA</recordid><startdate>20181002</startdate><enddate>20181002</enddate><creator>El-Bendary, M</creator><creator>Neamatallah, M</creator><creator>Elalfy, H</creator><creator>Besheer, T</creator><creator>Elkholi, A</creator><creator>El-Diasty, M</creator><creator>Elsareef, M</creator><creator>Zahran, M</creator><creator>El-Aarag, B</creator><creator>Gomaa, A</creator><creator>Elhammady, D</creator><creator>El-Setouhy, M</creator><creator>Hegazy, A</creator><creator>Esmat, G</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>4T-</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-3751-5927</orcidid><orcidid>https://orcid.org/0000-0002-5602-0989</orcidid><orcidid>https://orcid.org/0000-0002-0583-8860</orcidid><orcidid>https://orcid.org/0000-0001-6920-6849</orcidid></search><sort><creationdate>20181002</creationdate><title>The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection</title><author>El-Bendary, M ; Neamatallah, M ; Elalfy, H ; Besheer, T ; Elkholi, A ; El-Diasty, M ; Elsareef, M ; Zahran, M ; El-Aarag, B ; Gomaa, A ; Elhammady, D ; El-Setouhy, M ; Hegazy, A ; Esmat, G</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-c49b160443258b64a051a6dd3163969569b1fe1a1f4bc346bc98130b12e2e2953</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Adult</topic><topic>Alleles</topic><topic>Chronic infection</topic><topic>Female</topic><topic>Females</topic><topic>Genetic Association Studies</topic><topic>genetic polymorphism</topic><topic>Genetic Predisposition to Disease</topic><topic>Genotype</topic><topic>HCV</topic><topic>Hepacivirus - genetics</topic><topic>Hepacivirus - pathogenicity</topic><topic>Hepatitis C</topic><topic>Hepatitis C, Chronic - genetics</topic><topic>Hepatitis C, Chronic - pathology</topic><topic>Hepatitis C, Chronic - virology</topic><topic>Humans</topic><topic>Immune clearance</topic><topic>Immune response</topic><topic>Infections</topic><topic>Interferon</topic><topic>Male</topic><topic>Males</topic><topic>Middle Aged</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Risk Factors</topic><topic>sex-linked TLR</topic><topic>Single-nucleotide polymorphism</topic><topic>spontaneous clearance</topic><topic>TLR3 protein</topic><topic>TLR7 protein</topic><topic>Toll-Like Receptor 3 - genetics</topic><topic>Toll-Like Receptor 7 - genetics</topic><topic>Toll-Like Receptor 8 - genetics</topic><topic>Toll-like receptors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>El-Bendary, M</creatorcontrib><creatorcontrib>Neamatallah, M</creatorcontrib><creatorcontrib>Elalfy, H</creatorcontrib><creatorcontrib>Besheer, T</creatorcontrib><creatorcontrib>Elkholi, A</creatorcontrib><creatorcontrib>El-Diasty, M</creatorcontrib><creatorcontrib>Elsareef, M</creatorcontrib><creatorcontrib>Zahran, M</creatorcontrib><creatorcontrib>El-Aarag, B</creatorcontrib><creatorcontrib>Gomaa, A</creatorcontrib><creatorcontrib>Elhammady, D</creatorcontrib><creatorcontrib>El-Setouhy, M</creatorcontrib><creatorcontrib>Hegazy, A</creatorcontrib><creatorcontrib>Esmat, G</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Docstoc</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>MEDLINE - Academic</collection><jtitle>British journal of biomedical science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>El-Bendary, M</au><au>Neamatallah, M</au><au>Elalfy, H</au><au>Besheer, T</au><au>Elkholi, A</au><au>El-Diasty, M</au><au>Elsareef, M</au><au>Zahran, M</au><au>El-Aarag, B</au><au>Gomaa, A</au><au>Elhammady, D</au><au>El-Setouhy, M</au><au>Hegazy, A</au><au>Esmat, G</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection</atitle><jtitle>British journal of biomedical science</jtitle><addtitle>Br J Biomed Sci</addtitle><date>2018-10-02</date><risdate>2018</risdate><volume>75</volume><issue>4</issue><spage>175</spage><epage>181</epage><pages>175-181</pages><issn>0967-4845</issn><eissn>2474-0896</eissn><abstract>Background: Single nucleotide polymorphisms (SNPs) of Toll-like receptors (TLRs) are linked with functional modification of cytokine responses. In chronic hepatitis C virus (HCV) infection, studies of TLR polymorphisms have primarily targeted receptor pathways implicated in viral immune responses. We hypothesized that one or more variant(s) of TLR3, TLR7 and TLR8 are associated with different outcomes of HCV infection.
Materials & methods: A total of 3368 subjects from 850 families were recruited and divided into three main groups categorized as chronic HCV CHC spontaneous viral clearance (SVC), and controls. All individuals were genotyped for three SNPs for TLR3, two SNPs for TLR7, and two SNPs for TLR8 using allelic discrimination real-time PCR.
Results: Carriage of the C allele in three SNPs of TLR3 (rs3775290, rs3775291, and rs5743312), the C allele in TLR7 (rs3853839) in females only, and the C allele in TLR8 (rs3764879) in males only were significantly higher in SVC group than CHC group (P < 0.001), while carriage of the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both males and females were significantly higher in CHC infection more than SVC group (P < 0.001).
Conclusion: The C allele is protective of HCV in TLR3, TLR7 (rs3853839) in females only, and TLR8 (rs3764879) in males only, while risk of infection is linked to the T allele in TLR7 (rs179008) in females only and the A allele in TLR8 (rs3764880) in both sexes.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>29947302</pmid><doi>10.1080/09674845.2018.1492186</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-3751-5927</orcidid><orcidid>https://orcid.org/0000-0002-5602-0989</orcidid><orcidid>https://orcid.org/0000-0002-0583-8860</orcidid><orcidid>https://orcid.org/0000-0001-6920-6849</orcidid></addata></record> |
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subjects | Adult Alleles Chronic infection Female Females Genetic Association Studies genetic polymorphism Genetic Predisposition to Disease Genotype HCV Hepacivirus - genetics Hepacivirus - pathogenicity Hepatitis C Hepatitis C, Chronic - genetics Hepatitis C, Chronic - pathology Hepatitis C, Chronic - virology Humans Immune clearance Immune response Infections Interferon Male Males Middle Aged Polymorphism, Single Nucleotide - genetics Risk Factors sex-linked TLR Single-nucleotide polymorphism spontaneous clearance TLR3 protein TLR7 protein Toll-Like Receptor 3 - genetics Toll-Like Receptor 7 - genetics Toll-Like Receptor 8 - genetics Toll-like receptors |
title | The association of single nucleotide polymorphisms of Toll-like receptor 3, Toll-like receptor 7 and Toll-like receptor 8 genes with the susceptibility to HCV infection |
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