Depletion force between disordered linear macromolecules

When two macromolecules come very near in a fluid, the surrounding molecules, having finite volume, are less likely to get in between. This leads to a pressure difference manifesting as an entropic attraction, called depletion force. Here we calculate the density profile of liquid molecules surround...

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Bibliographic Details
Published in:arXiv.org 2020-01
Main Authors: Rupprecht, Nathaniel, Dervis Can Vural
Format: Article
Language:English
Subjects:
Dependence
Depletion
Macromolecules
Molecular dynamics
Online Access:Get full text
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Summary:When two macromolecules come very near in a fluid, the surrounding molecules, having finite volume, are less likely to get in between. This leads to a pressure difference manifesting as an entropic attraction, called depletion force. Here we calculate the density profile of liquid molecules surrounding a disordered rigid macromolecules modelled as a random arrangement of hard spheres on a linear backbone. We analytically determine the position dependence of the depletion force between two such disordered molecules by calculating the free energy of the system. We then use molecular dynamics simulations to obtain the depletion force between stiff disordered polymers as well as flexible ones and compare the two against each other. We also show how the disorder averaging can be handled starting from the inhomogenous RISM equations.
ISSN:2331-8422
DOI:10.48550/arxiv.1906.09233