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Mass-spectrometry-based draft of the Arabidopsis proteome
Plants are essential for life and are extremely diverse organisms with unique molecular capabilities 1 . Here we present a quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant Arabidopsis thaliana . Our analysis provides initial answers to how man...
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Published in: | Nature (London) 2020-03, Vol.579 (7799), p.409-414 |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
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Summary: | Plants are essential for life and are extremely diverse organisms with unique molecular capabilities
1
. Here we present a quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant
Arabidopsis thaliana
. Our analysis provides initial answers to how many genes exist as proteins (more than 18,000), where they are expressed, in which approximate quantities (a dynamic range of more than six orders of magnitude) and to what extent they are phosphorylated (over 43,000 sites). We present examples of how the data may be used, such as to discover proteins that are translated from short open-reading frames, to uncover sequence motifs that are involved in the regulation of protein production, and to identify tissue-specific protein complexes or phosphorylation-mediated signalling events. Interactive access to this resource for the plant community is provided by the ProteomicsDB and ATHENA databases, which include powerful bioinformatics tools to explore and characterize
Arabidopsis
proteins, their modifications and interactions.
A quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant
Arabidopsis thaliana
provides a valuable resource for plant research. |
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ISSN: | 0028-0836 1476-4687 |
DOI: | 10.1038/s41586-020-2094-2 |