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Optical tweezers-based velocimetry: a method to measure microscale unsteady flows
In the study of micro-scale biological flows, velocimetry methods based on passive tracers, such as micro-PIV and micro-PTV, are well established to characterize steady flows. However, these methods become inappropriate for measuring unsteady flows of small amplitude, because, on these scales, the m...
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Published in: | Experiments in fluids 2020, Vol.61 (9), Article 202 |
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description | In the study of micro-scale biological flows, velocimetry methods based on passive tracers, such as micro-PIV and micro-PTV, are well established to characterize steady flows. However, these methods become inappropriate for measuring unsteady flows of small amplitude, because, on these scales, the motion of passive tracers cannot be distinguished from Brownian motion. In this study, we use optical tweezers (OTs) in combination with Kalman filtering, to measure unsteady microscopic flows with high temporal accuracy. This method is referred to as optical tweezers-based velocimetry (OTV). The OTV method measures the nanometric displacements of a trapped bead, and predicts the instantaneous velocity of the flow by employing a Kalman filter. We discuss the accuracy of OTV in measuring unsteady flows with 1.5–70
μ
m s
-
1
amplitudes and 10–90 Hz frequencies. We quantify how the bead size and the laser power affect the velocimetry accuracy, and specify the optimal choices for the bead size and laser power to measure different unsteady flows. OTV accurately measures unsteady flows with amplitudes as small as 3–6
μ
m s
-
1
. We compare the accuracy of OTV and micro-PTV, and characterize the flow regime for which OTV outperforms micro-PTV. We also demonstrate the robustness of OTV by measuring the unsteady flow created by the cilia of green alga
Chlamydomonas reinhardtii
, and comparing with numerical predictions based on Stokes equations. An open-source implementation of the OTV software in
Matlab
is available through the 4TU.Centre for Research Data.
Graphic abstract |
doi_str_mv | 10.1007/s00348-020-03031-4 |
format | article |
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μ
m s
-
1
amplitudes and 10–90 Hz frequencies. We quantify how the bead size and the laser power affect the velocimetry accuracy, and specify the optimal choices for the bead size and laser power to measure different unsteady flows. OTV accurately measures unsteady flows with amplitudes as small as 3–6
μ
m s
-
1
. We compare the accuracy of OTV and micro-PTV, and characterize the flow regime for which OTV outperforms micro-PTV. We also demonstrate the robustness of OTV by measuring the unsteady flow created by the cilia of green alga
Chlamydomonas reinhardtii
, and comparing with numerical predictions based on Stokes equations. An open-source implementation of the OTV software in
Matlab
is available through the 4TU.Centre for Research Data.
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μ
m s
-
1
amplitudes and 10–90 Hz frequencies. We quantify how the bead size and the laser power affect the velocimetry accuracy, and specify the optimal choices for the bead size and laser power to measure different unsteady flows. OTV accurately measures unsteady flows with amplitudes as small as 3–6
μ
m s
-
1
. We compare the accuracy of OTV and micro-PTV, and characterize the flow regime for which OTV outperforms micro-PTV. We also demonstrate the robustness of OTV by measuring the unsteady flow created by the cilia of green alga
Chlamydomonas reinhardtii
, and comparing with numerical predictions based on Stokes equations. An open-source implementation of the OTV software in
Matlab
is available through the 4TU.Centre for Research Data.
Graphic abstract</description><subject>Accuracy</subject><subject>Amplitudes</subject><subject>Brownian motion</subject><subject>Computational fluid dynamics</subject><subject>Engineering</subject><subject>Engineering Fluid Dynamics</subject><subject>Engineering Thermodynamics</subject><subject>Fluid- and Aerodynamics</subject><subject>Heat and Mass Transfer</subject><subject>Kalman filters</subject><subject>Measurement methods</subject><subject>Numerical prediction</subject><subject>Research Article</subject><subject>Robustness (mathematics)</subject><subject>Source code</subject><subject>Steady flow</subject><subject>Tracers</subject><subject>Unsteady flow</subject><subject>Velocimetry</subject><issn>0723-4864</issn><issn>1432-1114</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kE9LAzEQxYMoWKtfwFPAc3TyZzdZb1K0CoUi6Dlks7O6Zdutya6lfnpTV_DmaR7De2-GHyGXHK45gL6JAFIZBgIYSJCcqSMy4UoKxjlXx2QCWkimTK5OyVmMKwCeFWAm5Hm57RvvWtrvEL8wRFa6iBX9xLbzzRr7sL-ljibx3lW075JycQhI140PXUxJpMMm9uiqPa3bbhfPyUnt2ogXv3NKXh_uX2aPbLGcP83uFswrgJ4hZFiY0hc605kqfFkJKHLU4PJSCieklk7URaWd81AbI2SFh3VZCJkrr-WUXI2929B9DBh7u-qGsEknrVDSCC6NNsklRtfh2xiwttvQrF3YWw72gM6O6GxCZ3_QWZVCcgzFZN68Yfir_if1De6bcXM</recordid><startdate>2020</startdate><enddate>2020</enddate><creator>Dehnavi, P. Ghoddoosi</creator><creator>Wei, D.</creator><creator>Aubin-Tam, M.-E.</creator><creator>Tam, D. S. W.</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0001-5300-0889</orcidid></search><sort><creationdate>2020</creationdate><title>Optical tweezers-based velocimetry: a method to measure microscale unsteady flows</title><author>Dehnavi, P. Ghoddoosi ; Wei, D. ; Aubin-Tam, M.-E. ; Tam, D. S. W.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c400t-e05e98bc9757549cbd2096e70a6b32a2373a2f9d7aac0f8823de2a23b92364c73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Accuracy</topic><topic>Amplitudes</topic><topic>Brownian motion</topic><topic>Computational fluid dynamics</topic><topic>Engineering</topic><topic>Engineering Fluid Dynamics</topic><topic>Engineering Thermodynamics</topic><topic>Fluid- and Aerodynamics</topic><topic>Heat and Mass Transfer</topic><topic>Kalman filters</topic><topic>Measurement methods</topic><topic>Numerical prediction</topic><topic>Research Article</topic><topic>Robustness (mathematics)</topic><topic>Source code</topic><topic>Steady flow</topic><topic>Tracers</topic><topic>Unsteady flow</topic><topic>Velocimetry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dehnavi, P. Ghoddoosi</creatorcontrib><creatorcontrib>Wei, D.</creatorcontrib><creatorcontrib>Aubin-Tam, M.-E.</creatorcontrib><creatorcontrib>Tam, D. S. W.</creatorcontrib><collection>SpringerOpen</collection><collection>CrossRef</collection><jtitle>Experiments in fluids</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dehnavi, P. Ghoddoosi</au><au>Wei, D.</au><au>Aubin-Tam, M.-E.</au><au>Tam, D. S. W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Optical tweezers-based velocimetry: a method to measure microscale unsteady flows</atitle><jtitle>Experiments in fluids</jtitle><stitle>Exp Fluids</stitle><date>2020</date><risdate>2020</risdate><volume>61</volume><issue>9</issue><artnum>202</artnum><issn>0723-4864</issn><eissn>1432-1114</eissn><abstract>In the study of micro-scale biological flows, velocimetry methods based on passive tracers, such as micro-PIV and micro-PTV, are well established to characterize steady flows. However, these methods become inappropriate for measuring unsteady flows of small amplitude, because, on these scales, the motion of passive tracers cannot be distinguished from Brownian motion. In this study, we use optical tweezers (OTs) in combination with Kalman filtering, to measure unsteady microscopic flows with high temporal accuracy. This method is referred to as optical tweezers-based velocimetry (OTV). The OTV method measures the nanometric displacements of a trapped bead, and predicts the instantaneous velocity of the flow by employing a Kalman filter. We discuss the accuracy of OTV in measuring unsteady flows with 1.5–70
μ
m s
-
1
amplitudes and 10–90 Hz frequencies. We quantify how the bead size and the laser power affect the velocimetry accuracy, and specify the optimal choices for the bead size and laser power to measure different unsteady flows. OTV accurately measures unsteady flows with amplitudes as small as 3–6
μ
m s
-
1
. We compare the accuracy of OTV and micro-PTV, and characterize the flow regime for which OTV outperforms micro-PTV. We also demonstrate the robustness of OTV by measuring the unsteady flow created by the cilia of green alga
Chlamydomonas reinhardtii
, and comparing with numerical predictions based on Stokes equations. An open-source implementation of the OTV software in
Matlab
is available through the 4TU.Centre for Research Data.
Graphic abstract</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s00348-020-03031-4</doi><orcidid>https://orcid.org/0000-0001-5300-0889</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Accuracy Amplitudes Brownian motion Computational fluid dynamics Engineering Engineering Fluid Dynamics Engineering Thermodynamics Fluid- and Aerodynamics Heat and Mass Transfer Kalman filters Measurement methods Numerical prediction Research Article Robustness (mathematics) Source code Steady flow Tracers Unsteady flow Velocimetry |
title | Optical tweezers-based velocimetry: a method to measure microscale unsteady flows |
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