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Estimating electron density at the bond critical point through atomic Hirshfeld surfaces
Interatomic surfaces often carry information related to the electron distribution in a molecule or crystal, not only being a visual aid but also enabling quantitative analyses. Under certain conditions, atomic Hirshfeld surfaces present a high resemblance to the interatomic surfaces obtained through...
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Published in: | Journal of applied crystallography 2021-12, Vol.54 (6), p.1600-1605 |
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container_title | Journal of applied crystallography |
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creator | Pinto, Camila B. Rodrigues, Bernardo L. Dos Santos, Leonardo H. R. |
description | Interatomic surfaces often carry information related to the electron distribution in a molecule or crystal, not only being a visual aid but also enabling quantitative analyses. Under certain conditions, atomic Hirshfeld surfaces present a high resemblance to the interatomic surfaces obtained through the quantum theory of atoms in molecules (QTAIM), with the advantage of being easily calculated, even for crystal structures determined at low resolutions (i.e. when a charge‐density refinement is not performed). Here an empirical relation between the curvedness property of the Hirshfeld surfaces and the electron density at the bond critical point for certain types of covalent and coordination interactions involving carbon atoms has been obtained. The exponential function was tested to estimate the electron density in different crystalline systems, and the highest deviation from reference values obtained through QTAIM was just 16%. Additionally, fine details of this fit may be salient to the difference in electronegativity of the atoms involved in the bond.
The relation between the electron density at the bond critical point estimated using the quantum theory of atoms in molecules and the curvature of atomic Hirshfeld surfaces is explored empirically through the curvedness property at particular points on these surfaces. |
doi_str_mv | 10.1107/S1600576721009213 |
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The relation between the electron density at the bond critical point estimated using the quantum theory of atoms in molecules and the curvature of atomic Hirshfeld surfaces is explored empirically through the curvedness property at particular points on these surfaces.</description><identifier>ISSN: 1600-5767</identifier><identifier>ISSN: 0021-8898</identifier><identifier>EISSN: 1600-5767</identifier><identifier>DOI: 10.1107/S1600576721009213</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>bond critical points ; Charge density ; Chemical bonds ; Critical point ; Crystal structure ; curvedness ; Electron density ; Electron distribution ; Electronegativity ; Empirical analysis ; Exponential functions ; Hirshfeld surfaces ; interatomic surfaces ; Quantum theory ; Visual aids</subject><ispartof>Journal of applied crystallography, 2021-12, Vol.54 (6), p.1600-1605</ispartof><rights>2021 Camila B. Pinto et al. published by IUCr Journals.</rights><rights>Copyright Blackwell Publishing Ltd. Dec 2021</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2534-69218584b7dcecb86fcecadbf1a9699b0f2cdde3ef8243a1124321f82f6e802c3</citedby><cites>FETCH-LOGICAL-c2534-69218584b7dcecb86fcecadbf1a9699b0f2cdde3ef8243a1124321f82f6e802c3</cites><orcidid>0000-0003-4490-6288 ; 0000-0002-1418-5048</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Pinto, Camila B.</creatorcontrib><creatorcontrib>Rodrigues, Bernardo L.</creatorcontrib><creatorcontrib>Dos Santos, Leonardo H. R.</creatorcontrib><title>Estimating electron density at the bond critical point through atomic Hirshfeld surfaces</title><title>Journal of applied crystallography</title><description>Interatomic surfaces often carry information related to the electron distribution in a molecule or crystal, not only being a visual aid but also enabling quantitative analyses. Under certain conditions, atomic Hirshfeld surfaces present a high resemblance to the interatomic surfaces obtained through the quantum theory of atoms in molecules (QTAIM), with the advantage of being easily calculated, even for crystal structures determined at low resolutions (i.e. when a charge‐density refinement is not performed). Here an empirical relation between the curvedness property of the Hirshfeld surfaces and the electron density at the bond critical point for certain types of covalent and coordination interactions involving carbon atoms has been obtained. The exponential function was tested to estimate the electron density in different crystalline systems, and the highest deviation from reference values obtained through QTAIM was just 16%. Additionally, fine details of this fit may be salient to the difference in electronegativity of the atoms involved in the bond.
The relation between the electron density at the bond critical point estimated using the quantum theory of atoms in molecules and the curvature of atomic Hirshfeld surfaces is explored empirically through the curvedness property at particular points on these surfaces.</description><subject>bond critical points</subject><subject>Charge density</subject><subject>Chemical bonds</subject><subject>Critical point</subject><subject>Crystal structure</subject><subject>curvedness</subject><subject>Electron density</subject><subject>Electron distribution</subject><subject>Electronegativity</subject><subject>Empirical analysis</subject><subject>Exponential functions</subject><subject>Hirshfeld surfaces</subject><subject>interatomic surfaces</subject><subject>Quantum theory</subject><subject>Visual aids</subject><issn>1600-5767</issn><issn>0021-8898</issn><issn>1600-5767</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNqFUE1LxDAQDaLguvoDvAU8VzNpm7ZHKaurLCz4Ad5Cmia7WbrNmqRI_70p60Hw4GXezOO9-ULoGsgtACnuXoERkhesoEBIRSE9QbOJSibu9Fd-ji683xECUUpn6GPhg9mLYPoNVp2Swdket6r3JoxYBBy2Cje2b7F0JhgpOnywpp94Z4fNNkrs3ki8NM5vtepa7AenhVT-Ep1p0Xl19YNz9P6weKuXyWr9-FTfrxJJ8zRLWNy1zMusKVqpZFMyHUG0jQZRsapqiKaybVWqdEmzVADESCEWmqmSUJnO0c2x78HZz0H5wHd2cH0cySkjrAIoKIsqOKqks947pfnBxbPdyIHw6YH8zwOjpzp6vkynxv8N_Ll-oes6J5Cl3-JvdCA</recordid><startdate>202112</startdate><enddate>202112</enddate><creator>Pinto, Camila B.</creator><creator>Rodrigues, Bernardo L.</creator><creator>Dos Santos, Leonardo H. R.</creator><general>International Union of Crystallography</general><general>Blackwell Publishing Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><orcidid>https://orcid.org/0000-0003-4490-6288</orcidid><orcidid>https://orcid.org/0000-0002-1418-5048</orcidid></search><sort><creationdate>202112</creationdate><title>Estimating electron density at the bond critical point through atomic Hirshfeld surfaces</title><author>Pinto, Camila B. ; Rodrigues, Bernardo L. ; Dos Santos, Leonardo H. R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2534-69218584b7dcecb86fcecadbf1a9699b0f2cdde3ef8243a1124321f82f6e802c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>bond critical points</topic><topic>Charge density</topic><topic>Chemical bonds</topic><topic>Critical point</topic><topic>Crystal structure</topic><topic>curvedness</topic><topic>Electron density</topic><topic>Electron distribution</topic><topic>Electronegativity</topic><topic>Empirical analysis</topic><topic>Exponential functions</topic><topic>Hirshfeld surfaces</topic><topic>interatomic surfaces</topic><topic>Quantum theory</topic><topic>Visual aids</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pinto, Camila B.</creatorcontrib><creatorcontrib>Rodrigues, Bernardo L.</creatorcontrib><creatorcontrib>Dos Santos, Leonardo H. R.</creatorcontrib><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Journal of applied crystallography</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pinto, Camila B.</au><au>Rodrigues, Bernardo L.</au><au>Dos Santos, Leonardo H. R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Estimating electron density at the bond critical point through atomic Hirshfeld surfaces</atitle><jtitle>Journal of applied crystallography</jtitle><date>2021-12</date><risdate>2021</risdate><volume>54</volume><issue>6</issue><spage>1600</spage><epage>1605</epage><pages>1600-1605</pages><issn>1600-5767</issn><issn>0021-8898</issn><eissn>1600-5767</eissn><abstract>Interatomic surfaces often carry information related to the electron distribution in a molecule or crystal, not only being a visual aid but also enabling quantitative analyses. Under certain conditions, atomic Hirshfeld surfaces present a high resemblance to the interatomic surfaces obtained through the quantum theory of atoms in molecules (QTAIM), with the advantage of being easily calculated, even for crystal structures determined at low resolutions (i.e. when a charge‐density refinement is not performed). Here an empirical relation between the curvedness property of the Hirshfeld surfaces and the electron density at the bond critical point for certain types of covalent and coordination interactions involving carbon atoms has been obtained. The exponential function was tested to estimate the electron density in different crystalline systems, and the highest deviation from reference values obtained through QTAIM was just 16%. Additionally, fine details of this fit may be salient to the difference in electronegativity of the atoms involved in the bond.
The relation between the electron density at the bond critical point estimated using the quantum theory of atoms in molecules and the curvature of atomic Hirshfeld surfaces is explored empirically through the curvedness property at particular points on these surfaces.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><doi>10.1107/S1600576721009213</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0003-4490-6288</orcidid><orcidid>https://orcid.org/0000-0002-1418-5048</orcidid></addata></record> |
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subjects | bond critical points Charge density Chemical bonds Critical point Crystal structure curvedness Electron density Electron distribution Electronegativity Empirical analysis Exponential functions Hirshfeld surfaces interatomic surfaces Quantum theory Visual aids |
title | Estimating electron density at the bond critical point through atomic Hirshfeld surfaces |
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