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Global proteomic analysis of the follicular fluid from brown brocket deer (Mazama gouazoubira; Fisher, 1814)
Understanding the protein composition of the follicular fluid from brown brocket deer would aid the development of a medium for in vitro embryo production, which would in turn contribute toward programs for species preservation. Proteomic shotgun is a sensitive tool for analysis of complex protein m...
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Published in: | European journal of wildlife research 2022-04, Vol.68 (2), Article 13 |
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creator | Souza, Thais T. S. van Tilburg, Maurício F. Bezerra, Maria J. B. Rola, Luciana D. Pereira, Leda M. C. Duarte, José M. B. Chaves, Maiana S. Melo, Luciana M. Moura, Arlindo A. A. N. Freitas, Vicente J. F. |
description | Understanding the protein composition of the follicular fluid from brown brocket deer would aid the development of a medium for in vitro embryo production, which would in turn contribute toward programs for species preservation. Proteomic shotgun is a sensitive tool for analysis of complex protein mixtures. Thus, this study aimed to use shotgun technique to investigate the proteome of fluid from small/medium and large follicles from brocket brown deer. The fluid was obtained by laparoscopy-guided follicular puncture from five females. Quantitative proteomic analysis was performed by multidimensional liquid chromatography coupled with mass spectrometry. A total of 226 proteins were identified in the follicular fluid, 53 and 60 of which were found only in small/medium and large follicles, respectively. One hundred and thirteen proteins were common to both groups of follicles. Quantitative analysis showed no significant differences (
P
> 0.05) in protein abundances in the follicular fluid from small/medium and large follicles. The proteins identified were classified by gene ontology terms, in silico interaction and assigned to 12 pathways indicated that proteins are involved in protein binding, catalytic activity, regulation of biological processes, extracellular matrix organization, and complement and coagulation cascades. In conclusion, these data add knowledge on the follicular development and provide original information on the follicular environment, which can contribute in the future to formulation of culture medium to use in embryo technology in brown brocket deer. |
doi_str_mv | 10.1007/s10344-022-01563-0 |
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P
> 0.05) in protein abundances in the follicular fluid from small/medium and large follicles. The proteins identified were classified by gene ontology terms, in silico interaction and assigned to 12 pathways indicated that proteins are involved in protein binding, catalytic activity, regulation of biological processes, extracellular matrix organization, and complement and coagulation cascades. In conclusion, these data add knowledge on the follicular development and provide original information on the follicular environment, which can contribute in the future to formulation of culture medium to use in embryo technology in brown brocket deer.</description><identifier>ISSN: 1612-4642</identifier><identifier>EISSN: 1439-0574</identifier><identifier>DOI: 10.1007/s10344-022-01563-0</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biological activity ; Biomedical and Life Sciences ; Catalytic activity ; Coagulation ; Ecology ; Embryos ; Extracellular matrix ; Fish & Wildlife Biology & Management ; Follicles ; Follicular fluid ; Laparoscopy ; Life Sciences ; Liquid chromatography ; Mass spectrometry ; Mass spectroscopy ; Original Article ; Protein composition ; Proteins ; Proteomes ; Proteomics ; Quantitative analysis ; Shotguns ; Zoology</subject><ispartof>European journal of wildlife research, 2022-04, Vol.68 (2), Article 13</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c270t-e7b7e5edd4a9c110311753aefd9e700e729d40ba253fa385967915afc8456b23</cites><orcidid>0000-0002-7805-0265 ; 0000-0001-7973-4063 ; 0000-0002-6887-5677 ; 0000-0003-3652-1011 ; 0000-0002-4526-0880 ; 0000-0002-8271-5733 ; 0000-0001-5819-0861 ; 0000-0003-2725-4660 ; 0000-0002-8773-8811 ; 0000-0002-0342-9588</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Souza, Thais T. S.</creatorcontrib><creatorcontrib>van Tilburg, Maurício F.</creatorcontrib><creatorcontrib>Bezerra, Maria J. B.</creatorcontrib><creatorcontrib>Rola, Luciana D.</creatorcontrib><creatorcontrib>Pereira, Leda M. C.</creatorcontrib><creatorcontrib>Duarte, José M. B.</creatorcontrib><creatorcontrib>Chaves, Maiana S.</creatorcontrib><creatorcontrib>Melo, Luciana M.</creatorcontrib><creatorcontrib>Moura, Arlindo A. A. N.</creatorcontrib><creatorcontrib>Freitas, Vicente J. F.</creatorcontrib><title>Global proteomic analysis of the follicular fluid from brown brocket deer (Mazama gouazoubira; Fisher, 1814)</title><title>European journal of wildlife research</title><addtitle>Eur J Wildl Res</addtitle><description>Understanding the protein composition of the follicular fluid from brown brocket deer would aid the development of a medium for in vitro embryo production, which would in turn contribute toward programs for species preservation. Proteomic shotgun is a sensitive tool for analysis of complex protein mixtures. Thus, this study aimed to use shotgun technique to investigate the proteome of fluid from small/medium and large follicles from brocket brown deer. The fluid was obtained by laparoscopy-guided follicular puncture from five females. Quantitative proteomic analysis was performed by multidimensional liquid chromatography coupled with mass spectrometry. A total of 226 proteins were identified in the follicular fluid, 53 and 60 of which were found only in small/medium and large follicles, respectively. One hundred and thirteen proteins were common to both groups of follicles. Quantitative analysis showed no significant differences (
P
> 0.05) in protein abundances in the follicular fluid from small/medium and large follicles. The proteins identified were classified by gene ontology terms, in silico interaction and assigned to 12 pathways indicated that proteins are involved in protein binding, catalytic activity, regulation of biological processes, extracellular matrix organization, and complement and coagulation cascades. In conclusion, these data add knowledge on the follicular development and provide original information on the follicular environment, which can contribute in the future to formulation of culture medium to use in embryo technology in brown brocket deer.</description><subject>Biological activity</subject><subject>Biomedical and Life Sciences</subject><subject>Catalytic activity</subject><subject>Coagulation</subject><subject>Ecology</subject><subject>Embryos</subject><subject>Extracellular matrix</subject><subject>Fish & Wildlife Biology & Management</subject><subject>Follicles</subject><subject>Follicular fluid</subject><subject>Laparoscopy</subject><subject>Life Sciences</subject><subject>Liquid chromatography</subject><subject>Mass spectrometry</subject><subject>Mass spectroscopy</subject><subject>Original Article</subject><subject>Protein composition</subject><subject>Proteins</subject><subject>Proteomes</subject><subject>Proteomics</subject><subject>Quantitative analysis</subject><subject>Shotguns</subject><subject>Zoology</subject><issn>1612-4642</issn><issn>1439-0574</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp9kE9LAzEUxIMoWKtfwFPAi4KrL_82u3iSYqtQ8dJ7yO4m7da0qcku0n56oyt48_LmHWYG5ofQJYE7AiDvIwHGeQaUZkBEzjI4QiPCWZmBkPw4_TmhGc85PUVnMa4BaAlMjJCbOV9ph3fBd8Zv2hrrrXb72EbsLe5WBlvvXFv3TgdsXd822Aa_wVXwn9vvW7-bDjfGBHz9qg96o_HS9_rg-6oN-gFP27gy4RaTgvCbc3RitYvm4lfHaDF9Wkyes_nb7GXyOM9qKqHLjKykEaZpuC5rkpYRIgXTxjalkQBG0rLhUGkqmNWsEGUuSyK0rQsu8oqyMboaatOoj97ETq19H9KsqGhOCw65KEhy0cFVBx9jMFbtQrvRYa8IqG-oaoCqElT1A1VBCrEhFJN5uzThr_qf1Bd6PXli</recordid><startdate>20220401</startdate><enddate>20220401</enddate><creator>Souza, Thais T. 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S.</au><au>van Tilburg, Maurício F.</au><au>Bezerra, Maria J. B.</au><au>Rola, Luciana D.</au><au>Pereira, Leda M. C.</au><au>Duarte, José M. B.</au><au>Chaves, Maiana S.</au><au>Melo, Luciana M.</au><au>Moura, Arlindo A. A. N.</au><au>Freitas, Vicente J. F.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Global proteomic analysis of the follicular fluid from brown brocket deer (Mazama gouazoubira; Fisher, 1814)</atitle><jtitle>European journal of wildlife research</jtitle><stitle>Eur J Wildl Res</stitle><date>2022-04-01</date><risdate>2022</risdate><volume>68</volume><issue>2</issue><artnum>13</artnum><issn>1612-4642</issn><eissn>1439-0574</eissn><abstract>Understanding the protein composition of the follicular fluid from brown brocket deer would aid the development of a medium for in vitro embryo production, which would in turn contribute toward programs for species preservation. Proteomic shotgun is a sensitive tool for analysis of complex protein mixtures. Thus, this study aimed to use shotgun technique to investigate the proteome of fluid from small/medium and large follicles from brocket brown deer. The fluid was obtained by laparoscopy-guided follicular puncture from five females. Quantitative proteomic analysis was performed by multidimensional liquid chromatography coupled with mass spectrometry. A total of 226 proteins were identified in the follicular fluid, 53 and 60 of which were found only in small/medium and large follicles, respectively. One hundred and thirteen proteins were common to both groups of follicles. Quantitative analysis showed no significant differences (
P
> 0.05) in protein abundances in the follicular fluid from small/medium and large follicles. The proteins identified were classified by gene ontology terms, in silico interaction and assigned to 12 pathways indicated that proteins are involved in protein binding, catalytic activity, regulation of biological processes, extracellular matrix organization, and complement and coagulation cascades. In conclusion, these data add knowledge on the follicular development and provide original information on the follicular environment, which can contribute in the future to formulation of culture medium to use in embryo technology in brown brocket deer.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s10344-022-01563-0</doi><orcidid>https://orcid.org/0000-0002-7805-0265</orcidid><orcidid>https://orcid.org/0000-0001-7973-4063</orcidid><orcidid>https://orcid.org/0000-0002-6887-5677</orcidid><orcidid>https://orcid.org/0000-0003-3652-1011</orcidid><orcidid>https://orcid.org/0000-0002-4526-0880</orcidid><orcidid>https://orcid.org/0000-0002-8271-5733</orcidid><orcidid>https://orcid.org/0000-0001-5819-0861</orcidid><orcidid>https://orcid.org/0000-0003-2725-4660</orcidid><orcidid>https://orcid.org/0000-0002-8773-8811</orcidid><orcidid>https://orcid.org/0000-0002-0342-9588</orcidid></addata></record> |
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subjects | Biological activity Biomedical and Life Sciences Catalytic activity Coagulation Ecology Embryos Extracellular matrix Fish & Wildlife Biology & Management Follicles Follicular fluid Laparoscopy Life Sciences Liquid chromatography Mass spectrometry Mass spectroscopy Original Article Protein composition Proteins Proteomes Proteomics Quantitative analysis Shotguns Zoology |
title | Global proteomic analysis of the follicular fluid from brown brocket deer (Mazama gouazoubira; Fisher, 1814) |
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