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Pararetroviruses: Plant Infecting dsDNA Viruses
Plant pararetroviruses (PRVs; family Caulimovirida) are non-enveloped double-stranded DNA viruses having either isometric or bacilliform virion. According to the current taxonomy, the family Caulimoviridae consists of ten genera with two newly added genera Dioscovirus and Vaccinivirus . PRVs have a...
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| Published in: | Plant molecular biology reporter 2022-03, Vol.40 (1), p.106-118 |
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| container_title | Plant molecular biology reporter |
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| creator | Nasim, Noohi Dey, Nrisingha |
| description | Plant pararetroviruses (PRVs; family Caulimovirida) are non-enveloped double-stranded DNA viruses having either isometric or bacilliform virion. According to the current taxonomy, the family Caulimoviridae consists of ten genera with two newly added genera
Dioscovirus
and
Vaccinivirus
. PRVs have a genome size between 7 and 9 kilobase pairs and differ mainly based on the number of open reading frames (ORFs; 1 to 8) in each genus. These ORFs encode many functional proteins that help the virus to survive within the host cell. They are transmitted by aphids, mealy bugs, or leafhoppers. These viruses have a wide geographical distribution and infect a broad range of monocotyledonous and dicotyledonous plant species, making their early detection and control a paramount requirement. The transcriptional unit (promoter) of the PRV genome has become an interesting “modular cassette” to the molecular biologist worldwide for fine-tuning of gene expression in plants. The present review highlights the current taxonomy, genome structure, transmission, and diagnosis of pararetroviruses and how the “modular cassette” would help the modern biotechnology-based translational research. |
| doi_str_mv | 10.1007/s11105-021-01294-7 |
| format | article |
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Dioscovirus
and
Vaccinivirus
. PRVs have a genome size between 7 and 9 kilobase pairs and differ mainly based on the number of open reading frames (ORFs; 1 to 8) in each genus. These ORFs encode many functional proteins that help the virus to survive within the host cell. They are transmitted by aphids, mealy bugs, or leafhoppers. These viruses have a wide geographical distribution and infect a broad range of monocotyledonous and dicotyledonous plant species, making their early detection and control a paramount requirement. The transcriptional unit (promoter) of the PRV genome has become an interesting “modular cassette” to the molecular biologist worldwide for fine-tuning of gene expression in plants. The present review highlights the current taxonomy, genome structure, transmission, and diagnosis of pararetroviruses and how the “modular cassette” would help the modern biotechnology-based translational research.</description><identifier>ISSN: 0735-9640</identifier><identifier>EISSN: 1572-9818</identifier><identifier>DOI: 10.1007/s11105-021-01294-7</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Bioinformatics ; Biomedical and Life Sciences ; Biotechnology ; DNA viruses ; Gene expression ; Genera ; Genomes ; Geographical distribution ; Isometric ; Life Sciences ; Metabolomics ; Modular structures ; Open reading frames ; Plant Breeding/Biotechnology ; Plant Sciences ; Plant species ; Proteomics ; Review ; Taxonomy ; Transcription ; Virions ; Viruses</subject><ispartof>Plant molecular biology reporter, 2022-03, Vol.40 (1), p.106-118</ispartof><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021</rights><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c249t-349ef8661cb9a5f0a85c69a26b26ff23528682b91a8bf06d62f44a2237b034ef3</citedby><cites>FETCH-LOGICAL-c249t-349ef8661cb9a5f0a85c69a26b26ff23528682b91a8bf06d62f44a2237b034ef3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Nasim, Noohi</creatorcontrib><creatorcontrib>Dey, Nrisingha</creatorcontrib><title>Pararetroviruses: Plant Infecting dsDNA Viruses</title><title>Plant molecular biology reporter</title><addtitle>Plant Mol Biol Rep</addtitle><description>Plant pararetroviruses (PRVs; family Caulimovirida) are non-enveloped double-stranded DNA viruses having either isometric or bacilliform virion. According to the current taxonomy, the family Caulimoviridae consists of ten genera with two newly added genera
Dioscovirus
and
Vaccinivirus
. PRVs have a genome size between 7 and 9 kilobase pairs and differ mainly based on the number of open reading frames (ORFs; 1 to 8) in each genus. These ORFs encode many functional proteins that help the virus to survive within the host cell. They are transmitted by aphids, mealy bugs, or leafhoppers. These viruses have a wide geographical distribution and infect a broad range of monocotyledonous and dicotyledonous plant species, making their early detection and control a paramount requirement. The transcriptional unit (promoter) of the PRV genome has become an interesting “modular cassette” to the molecular biologist worldwide for fine-tuning of gene expression in plants. The present review highlights the current taxonomy, genome structure, transmission, and diagnosis of pararetroviruses and how the “modular cassette” would help the modern biotechnology-based translational research.</description><subject>Bioinformatics</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>DNA viruses</subject><subject>Gene expression</subject><subject>Genera</subject><subject>Genomes</subject><subject>Geographical distribution</subject><subject>Isometric</subject><subject>Life Sciences</subject><subject>Metabolomics</subject><subject>Modular structures</subject><subject>Open reading frames</subject><subject>Plant Breeding/Biotechnology</subject><subject>Plant Sciences</subject><subject>Plant species</subject><subject>Proteomics</subject><subject>Review</subject><subject>Taxonomy</subject><subject>Transcription</subject><subject>Virions</subject><subject>Viruses</subject><issn>0735-9640</issn><issn>1572-9818</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp9kE1LAzEURYMoWKt_wNWA69iXl293pVotFO1C3YbMNClT6kxNpoL_3tER3Ll6i3vPfXAIuWRwzQD0JDPGQFJARoGhFVQfkRGTGqk1zByTEWguqVUCTslZzlvoITBmRCYrn3wKXWo_6nTIId8Uq51vumLRxFB1dbMp1vn2cVq8DvE5OYl-l8PF7x2Tl_nd8-yBLp_uF7PpklYobEe5sCEapVhVWi8jeCMrZT2qElWMyCUaZbC0zJsyglorjEJ4RK5L4CJEPiZXw-4-te-HkDu3bQ-p6V86VBI1Fyht38KhVaU25xSi26f6zadPx8B9i3GDGNeLcT9inO4hPkC5LzebkP6m_6G-ABixZBY</recordid><startdate>20220301</startdate><enddate>20220301</enddate><creator>Nasim, Noohi</creator><creator>Dey, Nrisingha</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope></search><sort><creationdate>20220301</creationdate><title>Pararetroviruses: Plant Infecting dsDNA Viruses</title><author>Nasim, Noohi ; 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family Caulimovirida) are non-enveloped double-stranded DNA viruses having either isometric or bacilliform virion. According to the current taxonomy, the family Caulimoviridae consists of ten genera with two newly added genera
Dioscovirus
and
Vaccinivirus
. PRVs have a genome size between 7 and 9 kilobase pairs and differ mainly based on the number of open reading frames (ORFs; 1 to 8) in each genus. These ORFs encode many functional proteins that help the virus to survive within the host cell. They are transmitted by aphids, mealy bugs, or leafhoppers. These viruses have a wide geographical distribution and infect a broad range of monocotyledonous and dicotyledonous plant species, making their early detection and control a paramount requirement. The transcriptional unit (promoter) of the PRV genome has become an interesting “modular cassette” to the molecular biologist worldwide for fine-tuning of gene expression in plants. The present review highlights the current taxonomy, genome structure, transmission, and diagnosis of pararetroviruses and how the “modular cassette” would help the modern biotechnology-based translational research.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s11105-021-01294-7</doi><tpages>13</tpages></addata></record> |
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| subjects | Bioinformatics Biomedical and Life Sciences Biotechnology DNA viruses Gene expression Genera Genomes Geographical distribution Isometric Life Sciences Metabolomics Modular structures Open reading frames Plant Breeding/Biotechnology Plant Sciences Plant species Proteomics Review Taxonomy Transcription Virions Viruses |
| title | Pararetroviruses: Plant Infecting dsDNA Viruses |
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