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Investigating Population Genetic Diversity and Rhizosphere Microbiota of Central Apennines’ Artemisia eriantha
The present study aimed to characterize the genetic structure of Artemisia eriantha Ten. and the diversity of the rhizosphere microbiota. Plant leaves and rhizosphere soils were sampled from three areas of Central Italy, namely Monte Corvo, Monte Portella (both from the Gran Sasso massif), and Monte...
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Published in: | Sustainability 2022-09, Vol.14 (18), p.11405 |
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description | The present study aimed to characterize the genetic structure of Artemisia eriantha Ten. and the diversity of the rhizosphere microbiota. Plant leaves and rhizosphere soils were sampled from three areas of Central Italy, namely Monte Corvo, Monte Portella (both from the Gran Sasso massif), and Monte Focalone (Majella massif). The plant samples were subjected to genetic structure analysis by amplified fragment length polymorphism (AFLP) markers. The microbiota from the rhizosphere soils was investigated by 16S rRNA gene metabarcoding. The within and among population variability was typical of outbreeding species. The AFLP polymorphisms revealed a marked closeness among plant populations collected in Monte Focalone and Monte Corvo, despite the geographical proximity of the latter with Monte Portella, a result confirmed by cluster, STRUCTURE, and discriminant analyses. 16S rRNA gene metabarcoding showed higher values of diversity for Monte Corvo (H, 5.7; Chao1, 445) and Monte Focalone (H′, 5.57; Chao1, 446) than Monte Portella (H′, 5.3; Chao1, 275). At the phylum level, the communities were mainly represented by Proteobacteria, Actinobacteria, and Acidobacteria (>10%). At the genus level, the Monte Focalone and Monte Corvo microbiotas were closer than Monte Portella, thus confirming the results from the plant communities. The findings provided evidence for the first time of an association between the Artemisia eriantha plant and microbiota communities. The relevance of the results in terms of biodiversity and the conservation strategies of plant and microbiota communities in the Central Apennines are discussed. |
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Plant leaves and rhizosphere soils were sampled from three areas of Central Italy, namely Monte Corvo, Monte Portella (both from the Gran Sasso massif), and Monte Focalone (Majella massif). The plant samples were subjected to genetic structure analysis by amplified fragment length polymorphism (AFLP) markers. The microbiota from the rhizosphere soils was investigated by 16S rRNA gene metabarcoding. The within and among population variability was typical of outbreeding species. The AFLP polymorphisms revealed a marked closeness among plant populations collected in Monte Focalone and Monte Corvo, despite the geographical proximity of the latter with Monte Portella, a result confirmed by cluster, STRUCTURE, and discriminant analyses. 16S rRNA gene metabarcoding showed higher values of diversity for Monte Corvo (H, 5.7; Chao1, 445) and Monte Focalone (H′, 5.57; Chao1, 446) than Monte Portella (H′, 5.3; Chao1, 275). At the phylum level, the communities were mainly represented by Proteobacteria, Actinobacteria, and Acidobacteria (>10%). At the genus level, the Monte Focalone and Monte Corvo microbiotas were closer than Monte Portella, thus confirming the results from the plant communities. The findings provided evidence for the first time of an association between the Artemisia eriantha plant and microbiota communities. The relevance of the results in terms of biodiversity and the conservation strategies of plant and microbiota communities in the Central Apennines are discussed.</description><identifier>ISSN: 2071-1050</identifier><identifier>EISSN: 2071-1050</identifier><identifier>DOI: 10.3390/su141811405</identifier><language>eng</language><publisher>Basel: MDPI AG</publisher><subject>Amplified fragment length polymorphism ; Biodiversity ; Chromosomes ; Gene polymorphism ; Genetic analysis ; Genetic diversity ; Genetic structure ; Genomes ; Massifs ; Microbiota ; Outbreeding ; Plant communities ; Plant populations ; Polymorphism ; Population genetics ; Rhizosphere ; rRNA 16S ; Soil investigations ; Structural analysis ; Sustainability ; Wildlife conservation</subject><ispartof>Sustainability, 2022-09, Vol.14 (18), p.11405</ispartof><rights>2022 by the authors. Licensee MDPI, Basel, Switzerland. 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The relevance of the results in terms of biodiversity and the conservation strategies of plant and microbiota communities in the Central Apennines are discussed.</description><subject>Amplified fragment length polymorphism</subject><subject>Biodiversity</subject><subject>Chromosomes</subject><subject>Gene polymorphism</subject><subject>Genetic analysis</subject><subject>Genetic diversity</subject><subject>Genetic structure</subject><subject>Genomes</subject><subject>Massifs</subject><subject>Microbiota</subject><subject>Outbreeding</subject><subject>Plant communities</subject><subject>Plant populations</subject><subject>Polymorphism</subject><subject>Population genetics</subject><subject>Rhizosphere</subject><subject>rRNA 16S</subject><subject>Soil investigations</subject><subject>Structural analysis</subject><subject>Sustainability</subject><subject>Wildlife conservation</subject><issn>2071-1050</issn><issn>2071-1050</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpNkEFOwzAQRS0EElXpigtYYokCHjtxkmVVoFQqAiFYR47jNK5aO9hOpbLiGlyPk2BUFp3N_MX7M_ofoUsgN4yV5NYPkEIBkJLsBI0oySEBkpHTI32OJt6vSRzGoAQ-Qv3C7JQPeiWCNiv8YvthE6U1eK6MClriO71Tzuuwx8I0-LXTn9b3nXIKP2npbK1tENi2eKZMcGKDp70yRhvlf76-8dQFtdVeC6ycFiZ04gKdtWLj1eR_j9H7w_3b7DFZPs8Xs-kykTTjIWkYNIQXgkIjKSe0FHmTSgaypoTKspaS0JbmUPNWUJ43tYI0l0AirICXGRujq8Pd3tmPIUas1nZwJr6soo1zKPK8iNT1gYpJvHeqrXqnt8LtKyDVX6vVUavsF3wTbCI</recordid><startdate>20220901</startdate><enddate>20220901</enddate><creator>Russi, Luigi</creator><creator>Marconi, Gianpiero</creator><creator>Ferradini, Nicoletta</creator><creator>Farda, Beatrice</creator><creator>Pellegrini, Marika</creator><creator>Pace, Loretta</creator><general>MDPI AG</general><scope>AAYXX</scope><scope>CITATION</scope><scope>4U-</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><orcidid>https://orcid.org/0000-0002-7521-2126</orcidid><orcidid>https://orcid.org/0000-0002-0073-9935</orcidid><orcidid>https://orcid.org/0000-0001-6465-3279</orcidid><orcidid>https://orcid.org/0000-0003-2669-0399</orcidid></search><sort><creationdate>20220901</creationdate><title>Investigating Population Genetic Diversity and Rhizosphere Microbiota of Central Apennines’ Artemisia eriantha</title><author>Russi, Luigi ; 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subjects | Amplified fragment length polymorphism Biodiversity Chromosomes Gene polymorphism Genetic analysis Genetic diversity Genetic structure Genomes Massifs Microbiota Outbreeding Plant communities Plant populations Polymorphism Population genetics Rhizosphere rRNA 16S Soil investigations Structural analysis Sustainability Wildlife conservation |
title | Investigating Population Genetic Diversity and Rhizosphere Microbiota of Central Apennines’ Artemisia eriantha |
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