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A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines

The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs...

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Published in:Organic chemistry frontiers an international journal of organic chemistry 2023-04, Vol.10 (8), p.1948-1958
Main Authors: Song-Shan, Dai, Xiao-jiao, Yang, Fang, Ran, Kirillov, Alexander M, Yang, Lizi
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container_end_page 1958
container_issue 8
container_start_page 1948
container_title Organic chemistry frontiers an international journal of organic chemistry
container_volume 10
creator Song-Shan, Dai
Xiao-jiao, Yang
Fang, Ran
Kirillov, Alexander M
Yang, Lizi
description The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.
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The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. 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This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.</description><subject>Ammonium</subject><subject>Chemical reactions</subject><subject>Configurations</subject><subject>Cyclopropane</subject><subject>Distortion</subject><subject>Intermediates</subject><subject>Mathematical analysis</subject><subject>Organic chemistry</subject><subject>Organic compounds</subject><subject>Stereoselectivity</subject><issn>2052-4110</issn><issn>2052-4110</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpNTs1KxDAYDKLgsu7FJwh4UaT65adtelxWV4VFL-t5SfKl0KUk3SZFuiffwTf0SSzoQRiYYRhmhpBLBncMRHWP4hAAmCrcCZlxyHkmGYPTf_qcLGLcwxTieQF5OSP1kj6stzSmAUcaavraZFYn3Y5Hh_Ra0FsqbjLt_dDq1ARPjUsfznmKwYf--_NLW-u6FHpqR9uGrg-d9i5S7ZFio49N32AzGRfkrNZtdIs_npP39eN29Zxt3p5eVstNZrliKZNOAWPIC6kKACGVqgCssUZqKUrtQNoJOZNohOHcKmYkSsRaWTRYoZiTq9_e6clhcDHt9mHo_TS542WlqjwXpRQ_O4VY-A</recordid><startdate>20230411</startdate><enddate>20230411</enddate><creator>Song-Shan, Dai</creator><creator>Xiao-jiao, Yang</creator><creator>Fang, Ran</creator><creator>Kirillov, Alexander M</creator><creator>Yang, Lizi</creator><general>Royal Society of Chemistry</general><scope>7QO</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>FR3</scope><scope>JG9</scope><scope>P64</scope></search><sort><creationdate>20230411</creationdate><title>A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines</title><author>Song-Shan, Dai ; Xiao-jiao, Yang ; Fang, Ran ; Kirillov, Alexander M ; Yang, Lizi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c281t-4e8011d26486003488900cbcb4a437ae04c04c514db3b22c81b4d4ddf8cdbd9d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Ammonium</topic><topic>Chemical reactions</topic><topic>Configurations</topic><topic>Cyclopropane</topic><topic>Distortion</topic><topic>Intermediates</topic><topic>Mathematical analysis</topic><topic>Organic chemistry</topic><topic>Organic compounds</topic><topic>Stereoselectivity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Song-Shan, Dai</creatorcontrib><creatorcontrib>Xiao-jiao, Yang</creatorcontrib><creatorcontrib>Fang, Ran</creatorcontrib><creatorcontrib>Kirillov, Alexander M</creatorcontrib><creatorcontrib>Yang, Lizi</creatorcontrib><collection>Biotechnology Research Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Materials Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Organic chemistry frontiers an international journal of organic chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Song-Shan, Dai</au><au>Xiao-jiao, Yang</au><au>Fang, Ran</au><au>Kirillov, Alexander M</au><au>Yang, Lizi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines</atitle><jtitle>Organic chemistry frontiers an international journal of organic chemistry</jtitle><date>2023-04-11</date><risdate>2023</risdate><volume>10</volume><issue>8</issue><spage>1948</spage><epage>1958</epage><pages>1948-1958</pages><issn>2052-4110</issn><eissn>2052-4110</eissn><abstract>The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.</abstract><cop>London</cop><pub>Royal Society of Chemistry</pub><doi>10.1039/d3qo00186e</doi><tpages>11</tpages></addata></record>
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subjects Ammonium
Chemical reactions
Configurations
Cyclopropane
Distortion
Intermediates
Mathematical analysis
Organic chemistry
Organic compounds
Stereoselectivity
title A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines
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