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A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines
The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs...
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Published in: | Organic chemistry frontiers an international journal of organic chemistry 2023-04, Vol.10 (8), p.1948-1958 |
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container_end_page | 1958 |
container_issue | 8 |
container_start_page | 1948 |
container_title | Organic chemistry frontiers an international journal of organic chemistry |
container_volume | 10 |
creator | Song-Shan, Dai Xiao-jiao, Yang Fang, Ran Kirillov, Alexander M Yang, Lizi |
description | The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions. |
doi_str_mv | 10.1039/d3qo00186e |
format | article |
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The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.</description><identifier>ISSN: 2052-4110</identifier><identifier>EISSN: 2052-4110</identifier><identifier>DOI: 10.1039/d3qo00186e</identifier><language>eng</language><publisher>London: Royal Society of Chemistry</publisher><subject>Ammonium ; Chemical reactions ; Configurations ; Cyclopropane ; Distortion ; Intermediates ; Mathematical analysis ; Organic chemistry ; Organic compounds ; Stereoselectivity</subject><ispartof>Organic chemistry frontiers an international journal of organic chemistry, 2023-04, Vol.10 (8), p.1948-1958</ispartof><rights>Copyright Royal Society of Chemistry 2023</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c281t-4e8011d26486003488900cbcb4a437ae04c04c514db3b22c81b4d4ddf8cdbd9d3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Song-Shan, Dai</creatorcontrib><creatorcontrib>Xiao-jiao, Yang</creatorcontrib><creatorcontrib>Fang, Ran</creatorcontrib><creatorcontrib>Kirillov, Alexander M</creatorcontrib><creatorcontrib>Yang, Lizi</creatorcontrib><title>A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines</title><title>Organic chemistry frontiers an international journal of organic chemistry</title><description>The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.</description><subject>Ammonium</subject><subject>Chemical reactions</subject><subject>Configurations</subject><subject>Cyclopropane</subject><subject>Distortion</subject><subject>Intermediates</subject><subject>Mathematical analysis</subject><subject>Organic chemistry</subject><subject>Organic compounds</subject><subject>Stereoselectivity</subject><issn>2052-4110</issn><issn>2052-4110</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpNTs1KxDAYDKLgsu7FJwh4UaT65adtelxWV4VFL-t5SfKl0KUk3SZFuiffwTf0SSzoQRiYYRhmhpBLBncMRHWP4hAAmCrcCZlxyHkmGYPTf_qcLGLcwxTieQF5OSP1kj6stzSmAUcaavraZFYn3Y5Hh_Ra0FsqbjLt_dDq1ARPjUsfznmKwYf--_NLW-u6FHpqR9uGrg-d9i5S7ZFio49N32AzGRfkrNZtdIs_npP39eN29Zxt3p5eVstNZrliKZNOAWPIC6kKACGVqgCssUZqKUrtQNoJOZNohOHcKmYkSsRaWTRYoZiTq9_e6clhcDHt9mHo_TS542WlqjwXpRQ_O4VY-A</recordid><startdate>20230411</startdate><enddate>20230411</enddate><creator>Song-Shan, Dai</creator><creator>Xiao-jiao, Yang</creator><creator>Fang, Ran</creator><creator>Kirillov, Alexander M</creator><creator>Yang, Lizi</creator><general>Royal Society of Chemistry</general><scope>7QO</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>FR3</scope><scope>JG9</scope><scope>P64</scope></search><sort><creationdate>20230411</creationdate><title>A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines</title><author>Song-Shan, Dai ; Xiao-jiao, Yang ; Fang, Ran ; Kirillov, Alexander M ; Yang, Lizi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c281t-4e8011d26486003488900cbcb4a437ae04c04c514db3b22c81b4d4ddf8cdbd9d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Ammonium</topic><topic>Chemical reactions</topic><topic>Configurations</topic><topic>Cyclopropane</topic><topic>Distortion</topic><topic>Intermediates</topic><topic>Mathematical analysis</topic><topic>Organic chemistry</topic><topic>Organic compounds</topic><topic>Stereoselectivity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Song-Shan, Dai</creatorcontrib><creatorcontrib>Xiao-jiao, Yang</creatorcontrib><creatorcontrib>Fang, Ran</creatorcontrib><creatorcontrib>Kirillov, Alexander M</creatorcontrib><creatorcontrib>Yang, Lizi</creatorcontrib><collection>Biotechnology Research Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Materials Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Organic chemistry frontiers an international journal of organic chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Song-Shan, Dai</au><au>Xiao-jiao, Yang</au><au>Fang, Ran</au><au>Kirillov, Alexander M</au><au>Yang, Lizi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines</atitle><jtitle>Organic chemistry frontiers an international journal of organic chemistry</jtitle><date>2023-04-11</date><risdate>2023</risdate><volume>10</volume><issue>8</issue><spage>1948</spage><epage>1958</epage><pages>1948-1958</pages><issn>2052-4110</issn><eissn>2052-4110</eissn><abstract>The mechanism and stereoselectivity of the Ni(ii)-catalyzed [3 + 3] annulation between donor–acceptor cyclopropanes (DACs) and diaziridines were studied by DFT calculations. The obtained results show that the entire reaction comprises three main steps: (1) nucleophilic attack of diaziridines on DACs to form a quaternary ammonium intermediate; (2) cleavage of the unstable C–N bond in the quaternary ammonium intermediate to generate the key intermediate; (3) cyclization of the key intermediate involving two carbon atoms with opposite charges to obtain products with different configurations via distinct six-membered ring transition states. Based on the calculation results, the reaction between DACs of R-configuration and diaziridines with five-membered ring substituents leads to a predominant E-configuration product. However, Z-configuration products are the major outcome of the reactions involving S-configuration DACs. When R-configuration DACs react with diaziridines containing six-membered rings, the key intermediates of Z-configuration are more stable, thus resulting in the main products with Z-configuration. Furthermore, the distortion/interaction analysis revealed that the configuration of the final product is dominated by the distortion energy and is closely related to that of the key intermediate. This theoretical study might provide new perspectives toward predicting the reaction pathways and rationalizing selectivity features in related types of annulation reactions.</abstract><cop>London</cop><pub>Royal Society of Chemistry</pub><doi>10.1039/d3qo00186e</doi><tpages>11</tpages></addata></record> |
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subjects | Ammonium Chemical reactions Configurations Cyclopropane Distortion Intermediates Mathematical analysis Organic chemistry Organic compounds Stereoselectivity |
title | A DFT study of Ni-catalyzed (3 + 3)-annulation between donor–acceptor cyclopropanes and diaziridines |
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