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Conformational and state-specific effects in reactions of 2,3-dibromobutadiene with Coulomb-crystallized calcium ions
Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of chemical reactions under precisely controlled conditions in the gas phase. Here, we generated samples of selected gauche and s-trans 2,3-dibromobutadiene (DBB) by electrostatic deflecti...
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Published in: | Physical chemistry chemical physics : PCCP 2023-05, Vol.25 (2), p.13933-13945 |
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creator | Kilaj, Ardita Käser, Silvan Wang, Jia Stra ák, Patrik Schwilk, Max Xu, Lei von Lilienfeld, O. Anatole Küpper, Jochen Meuwly, Markus Willitsch, Stefan |
description | Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of chemical reactions under precisely controlled conditions in the gas phase. Here, we generated samples of selected
gauche
and
s-trans
2,3-dibromobutadiene (DBB) by electrostatic deflection in a molecular beam and studied their reaction with Coulomb crystals of laser-cooled Ca
+
ions in an ion trap. The rate coefficients for the total reaction were found to strongly depend on both the conformation of DBB and the electronic state of Ca
+
. In the (4p)
2
P
1/2
and (3d)
2
D
3/2
excited states of Ca
+
, the reaction is capture-limited and faster for the
gauche
conformer due to long-range ion-dipole interactions. In the (4s)
2
S
1/2
ground state of Ca
+
, the reaction rate for
s-trans
DBB still conforms with the capture limit, while that for
gauche
DBB is strongly suppressed. The experimental observations were analysed with the help of adiabatic capture theory,
ab initio
calculations and reactive molecular dynamics simulations on a machine-learned full-dimensional potential energy surface of the system. The theory yields near-quantitative agreement for
s-trans
-DBB, but overestimates the reactivity of the
gauche
-conformer compared to the experiment. The present study points to the important role of molecular geometry even in strongly reactive exothermic systems and illustrates striking differences in the reactivity of individual conformers in gas-phase ion-molecule reactions.
Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of the reaction of 2,3-dibromobutadiene with laser-cooled calcium ions in the gas phase. |
doi_str_mv | 10.1039/d3cp01416a |
format | article |
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gauche
and
s-trans
2,3-dibromobutadiene (DBB) by electrostatic deflection in a molecular beam and studied their reaction with Coulomb crystals of laser-cooled Ca
+
ions in an ion trap. The rate coefficients for the total reaction were found to strongly depend on both the conformation of DBB and the electronic state of Ca
+
. In the (4p)
2
P
1/2
and (3d)
2
D
3/2
excited states of Ca
+
, the reaction is capture-limited and faster for the
gauche
conformer due to long-range ion-dipole interactions. In the (4s)
2
S
1/2
ground state of Ca
+
, the reaction rate for
s-trans
DBB still conforms with the capture limit, while that for
gauche
DBB is strongly suppressed. The experimental observations were analysed with the help of adiabatic capture theory,
ab initio
calculations and reactive molecular dynamics simulations on a machine-learned full-dimensional potential energy surface of the system. The theory yields near-quantitative agreement for
s-trans
-DBB, but overestimates the reactivity of the
gauche
-conformer compared to the experiment. The present study points to the important role of molecular geometry even in strongly reactive exothermic systems and illustrates striking differences in the reactivity of individual conformers in gas-phase ion-molecule reactions.
Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of the reaction of 2,3-dibromobutadiene with laser-cooled calcium ions in the gas phase.</description><identifier>ISSN: 1463-9076</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/d3cp01416a</identifier><identifier>PMID: 37190820</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Calcium ions ; Chemical reactions ; Chemistry ; Crystallization ; Dipole interactions ; Electron states ; Exothermic reactions ; Laser cooling ; Molecular beams ; Molecular dynamics ; Potential energy ; Vapor phases</subject><ispartof>Physical chemistry chemical physics : PCCP, 2023-05, Vol.25 (2), p.13933-13945</ispartof><rights>Copyright Royal Society of Chemistry 2023</rights><rights>This journal is © the Owner Societies 2023 The Royal Society of Chemistry</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c429t-e37f036c53786e83e0009e86c0a23d2b0ed14a87dc4f4d3a282dd2f81917b27c3</citedby><cites>FETCH-LOGICAL-c429t-e37f036c53786e83e0009e86c0a23d2b0ed14a87dc4f4d3a282dd2f81917b27c3</cites><orcidid>0000-0002-3641-8519 ; 0000-0001-7012-6192 ; 0000-0001-9264-5364 ; 0000-0002-8376-0579 ; 0000-0001-7419-0466 ; 0000-0001-7930-8806 ; 0000-0003-4395-9345 ; 0000-0002-3795-8699</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37190820$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kilaj, Ardita</creatorcontrib><creatorcontrib>Käser, Silvan</creatorcontrib><creatorcontrib>Wang, Jia</creatorcontrib><creatorcontrib>Stra ák, Patrik</creatorcontrib><creatorcontrib>Schwilk, Max</creatorcontrib><creatorcontrib>Xu, Lei</creatorcontrib><creatorcontrib>von Lilienfeld, O. Anatole</creatorcontrib><creatorcontrib>Küpper, Jochen</creatorcontrib><creatorcontrib>Meuwly, Markus</creatorcontrib><creatorcontrib>Willitsch, Stefan</creatorcontrib><title>Conformational and state-specific effects in reactions of 2,3-dibromobutadiene with Coulomb-crystallized calcium ions</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of chemical reactions under precisely controlled conditions in the gas phase. Here, we generated samples of selected
gauche
and
s-trans
2,3-dibromobutadiene (DBB) by electrostatic deflection in a molecular beam and studied their reaction with Coulomb crystals of laser-cooled Ca
+
ions in an ion trap. The rate coefficients for the total reaction were found to strongly depend on both the conformation of DBB and the electronic state of Ca
+
. In the (4p)
2
P
1/2
and (3d)
2
D
3/2
excited states of Ca
+
, the reaction is capture-limited and faster for the
gauche
conformer due to long-range ion-dipole interactions. In the (4s)
2
S
1/2
ground state of Ca
+
, the reaction rate for
s-trans
DBB still conforms with the capture limit, while that for
gauche
DBB is strongly suppressed. The experimental observations were analysed with the help of adiabatic capture theory,
ab initio
calculations and reactive molecular dynamics simulations on a machine-learned full-dimensional potential energy surface of the system. The theory yields near-quantitative agreement for
s-trans
-DBB, but overestimates the reactivity of the
gauche
-conformer compared to the experiment. The present study points to the important role of molecular geometry even in strongly reactive exothermic systems and illustrates striking differences in the reactivity of individual conformers in gas-phase ion-molecule reactions.
Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of the reaction of 2,3-dibromobutadiene with laser-cooled calcium ions in the gas phase.</description><subject>Calcium ions</subject><subject>Chemical reactions</subject><subject>Chemistry</subject><subject>Crystallization</subject><subject>Dipole interactions</subject><subject>Electron states</subject><subject>Exothermic reactions</subject><subject>Laser cooling</subject><subject>Molecular beams</subject><subject>Molecular dynamics</subject><subject>Potential energy</subject><subject>Vapor phases</subject><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpd0stvFSEUB2BiNLZWN-41JG4a4yivOzAr04zPpIkudE0YOFgaZrgCo2n_erm99fpYQXI-fjlwQOgxJS8p4cMrx-2WUEF7cwcdU9HzbiBK3D3sZX-EHpRySQihG8rvoyMuaSOMHKN1TItPeTY1pMVEbBaHSzUVurIFG3ywGLwHWwsOC85g7A4WnDxmL3jnwpTTnKa1GhdgAfwz1As8pjWmeepsvmpZMYZrcNiaaMM6493xh-ieN7HAo9v1BH199_bL-KE7__T-43h23lnBhtoBl57w3m64VD0oDu0GA6jeEsO4YxMBR4VR0lnhheOGKeYc84oOVE5MWn6CXu9zt-s0g7Ow1Gyi3uYwm3ylkwn638oSLvS39ENTwohUUrSE09uEnL6vUKqeQ7EQo1kgrUUzRcWGyWEgjT77j16mNbdHvVFyULTnrKnne2VzKiWDP3RDid6NU7_h4-ebcZ41_PTv_g_09_waeLIHudhD9c9_4L8APwemYw</recordid><startdate>20230524</startdate><enddate>20230524</enddate><creator>Kilaj, Ardita</creator><creator>Käser, Silvan</creator><creator>Wang, Jia</creator><creator>Stra ák, Patrik</creator><creator>Schwilk, Max</creator><creator>Xu, Lei</creator><creator>von Lilienfeld, O. Anatole</creator><creator>Küpper, Jochen</creator><creator>Meuwly, Markus</creator><creator>Willitsch, Stefan</creator><general>Royal Society of Chemistry</general><general>The Royal Society of Chemistry</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3641-8519</orcidid><orcidid>https://orcid.org/0000-0001-7012-6192</orcidid><orcidid>https://orcid.org/0000-0001-9264-5364</orcidid><orcidid>https://orcid.org/0000-0002-8376-0579</orcidid><orcidid>https://orcid.org/0000-0001-7419-0466</orcidid><orcidid>https://orcid.org/0000-0001-7930-8806</orcidid><orcidid>https://orcid.org/0000-0003-4395-9345</orcidid><orcidid>https://orcid.org/0000-0002-3795-8699</orcidid></search><sort><creationdate>20230524</creationdate><title>Conformational and state-specific effects in reactions of 2,3-dibromobutadiene with Coulomb-crystallized calcium ions</title><author>Kilaj, Ardita ; Käser, Silvan ; Wang, Jia ; Stra ák, Patrik ; Schwilk, Max ; Xu, Lei ; von Lilienfeld, O. Anatole ; Küpper, Jochen ; Meuwly, Markus ; Willitsch, Stefan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-e37f036c53786e83e0009e86c0a23d2b0ed14a87dc4f4d3a282dd2f81917b27c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Calcium ions</topic><topic>Chemical reactions</topic><topic>Chemistry</topic><topic>Crystallization</topic><topic>Dipole interactions</topic><topic>Electron states</topic><topic>Exothermic reactions</topic><topic>Laser cooling</topic><topic>Molecular beams</topic><topic>Molecular dynamics</topic><topic>Potential energy</topic><topic>Vapor phases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kilaj, Ardita</creatorcontrib><creatorcontrib>Käser, Silvan</creatorcontrib><creatorcontrib>Wang, Jia</creatorcontrib><creatorcontrib>Stra ák, Patrik</creatorcontrib><creatorcontrib>Schwilk, Max</creatorcontrib><creatorcontrib>Xu, Lei</creatorcontrib><creatorcontrib>von Lilienfeld, O. Anatole</creatorcontrib><creatorcontrib>Küpper, Jochen</creatorcontrib><creatorcontrib>Meuwly, Markus</creatorcontrib><creatorcontrib>Willitsch, Stefan</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kilaj, Ardita</au><au>Käser, Silvan</au><au>Wang, Jia</au><au>Stra ák, Patrik</au><au>Schwilk, Max</au><au>Xu, Lei</au><au>von Lilienfeld, O. Anatole</au><au>Küpper, Jochen</au><au>Meuwly, Markus</au><au>Willitsch, Stefan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Conformational and state-specific effects in reactions of 2,3-dibromobutadiene with Coulomb-crystallized calcium ions</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2023-05-24</date><risdate>2023</risdate><volume>25</volume><issue>2</issue><spage>13933</spage><epage>13945</epage><pages>13933-13945</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of chemical reactions under precisely controlled conditions in the gas phase. Here, we generated samples of selected
gauche
and
s-trans
2,3-dibromobutadiene (DBB) by electrostatic deflection in a molecular beam and studied their reaction with Coulomb crystals of laser-cooled Ca
+
ions in an ion trap. The rate coefficients for the total reaction were found to strongly depend on both the conformation of DBB and the electronic state of Ca
+
. In the (4p)
2
P
1/2
and (3d)
2
D
3/2
excited states of Ca
+
, the reaction is capture-limited and faster for the
gauche
conformer due to long-range ion-dipole interactions. In the (4s)
2
S
1/2
ground state of Ca
+
, the reaction rate for
s-trans
DBB still conforms with the capture limit, while that for
gauche
DBB is strongly suppressed. The experimental observations were analysed with the help of adiabatic capture theory,
ab initio
calculations and reactive molecular dynamics simulations on a machine-learned full-dimensional potential energy surface of the system. The theory yields near-quantitative agreement for
s-trans
-DBB, but overestimates the reactivity of the
gauche
-conformer compared to the experiment. The present study points to the important role of molecular geometry even in strongly reactive exothermic systems and illustrates striking differences in the reactivity of individual conformers in gas-phase ion-molecule reactions.
Recent advances in experimental methodology enabled studies of the quantum-state- and conformational dependence of the reaction of 2,3-dibromobutadiene with laser-cooled calcium ions in the gas phase.</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>37190820</pmid><doi>10.1039/d3cp01416a</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-3641-8519</orcidid><orcidid>https://orcid.org/0000-0001-7012-6192</orcidid><orcidid>https://orcid.org/0000-0001-9264-5364</orcidid><orcidid>https://orcid.org/0000-0002-8376-0579</orcidid><orcidid>https://orcid.org/0000-0001-7419-0466</orcidid><orcidid>https://orcid.org/0000-0001-7930-8806</orcidid><orcidid>https://orcid.org/0000-0003-4395-9345</orcidid><orcidid>https://orcid.org/0000-0002-3795-8699</orcidid><oa>free_for_read</oa></addata></record> |
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source | Royal Society of Chemistry |
subjects | Calcium ions Chemical reactions Chemistry Crystallization Dipole interactions Electron states Exothermic reactions Laser cooling Molecular beams Molecular dynamics Potential energy Vapor phases |
title | Conformational and state-specific effects in reactions of 2,3-dibromobutadiene with Coulomb-crystallized calcium ions |
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