Loading…
Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum
A full-length lily-type lectin ( Sm LTL) was identified from turbot ( Scophthalmus maximus ) in this study. By searching database for protein identification and function prediction, Sm LTL were confirmed. The full-length cDNA of Sm LTL is composed of 569 bp and contains a 339 bp ORF that encodes 112...
Saved in:
Published in: | Journal of oceanology and limnology 2018-03, Vol.36 (2), p.508-518 |
---|---|
Main Authors: | , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733 |
---|---|
cites | cdi_FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733 |
container_end_page | 518 |
container_issue | 2 |
container_start_page | 508 |
container_title | Journal of oceanology and limnology |
container_volume | 36 |
creator | Xia, Dandan Ma, Aijun Huang, Zhihui Shang, Xiaomei Cui, Wenxiao Yang, Zhi Qu, Jiangbo |
description | A full-length lily-type lectin (
Sm
LTL) was identified from turbot (
Scophthalmus maximus
) in this study. By searching database for protein identification and function prediction,
Sm
LTL were confirmed. The full-length cDNA of
Sm
LTL is composed of 569 bp and contains a 339 bp ORF that encodes 112 amino acid residues. The
Sm
LTL peptide is characterized by a specific β-prism architecture and contains three mannose binding sites in a three-fold internal repeat between amino acids 30–99; two of the repeats share the classical mannose binding domain (QxDxNxVxY) while the third binding site was similar to other fish-specific binding motifs (TxTxGxRxV). The primary, secondary, and tertiary structures of
Sm
LTL were predicted and analyzed, indicating that the
Sm
LTL protein was hydrophilic, contained 5.36% α-helices, 39.29% extended strands, 16.07% β-folds, and 39.29% random coils, and three β-folds. Quantitative realtime polymerase chain reaction (qPCR) analysis revealed that the
Sm
LTL mRNA was abundantly expressed in skin, gill, and intestine. Low levels of
Sm
LTL expression were observed in other tissues. The expression of
Sm
LTL in gill, skin and intestine increased at mRNA level after stimulation of Vibrio anguillarum, our results suggest that
Sm
LTL serve as the first line of defence against microbial infections and play a pivotal role in the innate mucosal immune system. The current study indicates that
Sm
LTL is a member of the lilytype lectin family and the information reported here will provide an important foundation for future research on the role of this protein. |
doi_str_mv | 10.1007/s00343-017-6268-1 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2918109864</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2918109864</sourcerecordid><originalsourceid>FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733</originalsourceid><addsrcrecordid>eNp1UU1LxDAULKLgsvoDvAW8KBh9SZq0e5TFL6h48OMa0mzqZmmbmqTg-j_8v0YrePL05vFmhjdMlh0ROCcAxUUAYDnDQAosqCgx2clmlFOGGadkN2FYCMw5lPvZYQgbAKBQUuB8ln3eu9bosVUe6bXySkfj7YeK1vVI9Stk3gdvQphW1W6DDcg1qLLtFsftYFBSR9ujk8eueqpOUYJx9LWL6FG7YR3Xqu3GgDr1btM8-_G0MaBkOrg-GBQderG1ty6dXkfbpk_G7iDba1QbzOHvnGfP11dPy1tcPdzcLS8rrBkRETe0hJUQueaKFUVtyoVZ0UKvQAnOuU45a6OJFilpA4ISKIq8FgJyw4iGgrF5djz5Dt69jSZEuXGjTzmDpAtSEliUIk8sMrG0dyF408jB2075rSQgvwuQUwEyFSC_C5AkaeikCYnbvxr_5_y_6AuqGYom</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2918109864</pqid></control><display><type>article</type><title>Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum</title><source>Springer Link</source><creator>Xia, Dandan ; Ma, Aijun ; Huang, Zhihui ; Shang, Xiaomei ; Cui, Wenxiao ; Yang, Zhi ; Qu, Jiangbo</creator><creatorcontrib>Xia, Dandan ; Ma, Aijun ; Huang, Zhihui ; Shang, Xiaomei ; Cui, Wenxiao ; Yang, Zhi ; Qu, Jiangbo</creatorcontrib><description>A full-length lily-type lectin (
Sm
LTL) was identified from turbot (
Scophthalmus maximus
) in this study. By searching database for protein identification and function prediction,
Sm
LTL were confirmed. The full-length cDNA of
Sm
LTL is composed of 569 bp and contains a 339 bp ORF that encodes 112 amino acid residues. The
Sm
LTL peptide is characterized by a specific β-prism architecture and contains three mannose binding sites in a three-fold internal repeat between amino acids 30–99; two of the repeats share the classical mannose binding domain (QxDxNxVxY) while the third binding site was similar to other fish-specific binding motifs (TxTxGxRxV). The primary, secondary, and tertiary structures of
Sm
LTL were predicted and analyzed, indicating that the
Sm
LTL protein was hydrophilic, contained 5.36% α-helices, 39.29% extended strands, 16.07% β-folds, and 39.29% random coils, and three β-folds. Quantitative realtime polymerase chain reaction (qPCR) analysis revealed that the
Sm
LTL mRNA was abundantly expressed in skin, gill, and intestine. Low levels of
Sm
LTL expression were observed in other tissues. The expression of
Sm
LTL in gill, skin and intestine increased at mRNA level after stimulation of Vibrio anguillarum, our results suggest that
Sm
LTL serve as the first line of defence against microbial infections and play a pivotal role in the innate mucosal immune system. The current study indicates that
Sm
LTL is a member of the lilytype lectin family and the information reported here will provide an important foundation for future research on the role of this protein.</description><identifier>ISSN: 2096-5508</identifier><identifier>EISSN: 2523-3521</identifier><identifier>DOI: 10.1007/s00343-017-6268-1</identifier><language>eng</language><publisher>Heidelberg: Science Press</publisher><subject>Amino acids ; Bacteria ; Binding sites ; Biology ; Complementary DNA ; Earth and Environmental Science ; Earth Sciences ; Fish ; Helices ; Immune system ; Immunity ; Intestine ; Intestines ; Lectins ; Mannose ; Marine fishes ; Microorganisms ; mRNA ; Mucosal immunity ; Nucleotide sequence ; Oceanography ; Open reading frames ; PCR ; Polymerase chain reaction ; Proteins ; Scophthalmus maximus ; Tertiary ; Vibrio anguillarum</subject><ispartof>Journal of oceanology and limnology, 2018-03, Vol.36 (2), p.508-518</ispartof><rights>Chinese Society for Oceanology and Limnology, Science Press and Springer-Verlag GmbH Germany, part of Springer Nature 2017</rights><rights>Chinese Society for Oceanology and Limnology, Science Press and Springer-Verlag GmbH Germany, part of Springer Nature 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733</citedby><cites>FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Xia, Dandan</creatorcontrib><creatorcontrib>Ma, Aijun</creatorcontrib><creatorcontrib>Huang, Zhihui</creatorcontrib><creatorcontrib>Shang, Xiaomei</creatorcontrib><creatorcontrib>Cui, Wenxiao</creatorcontrib><creatorcontrib>Yang, Zhi</creatorcontrib><creatorcontrib>Qu, Jiangbo</creatorcontrib><title>Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum</title><title>Journal of oceanology and limnology</title><addtitle>J. Ocean. Limnol</addtitle><description>A full-length lily-type lectin (
Sm
LTL) was identified from turbot (
Scophthalmus maximus
) in this study. By searching database for protein identification and function prediction,
Sm
LTL were confirmed. The full-length cDNA of
Sm
LTL is composed of 569 bp and contains a 339 bp ORF that encodes 112 amino acid residues. The
Sm
LTL peptide is characterized by a specific β-prism architecture and contains three mannose binding sites in a three-fold internal repeat between amino acids 30–99; two of the repeats share the classical mannose binding domain (QxDxNxVxY) while the third binding site was similar to other fish-specific binding motifs (TxTxGxRxV). The primary, secondary, and tertiary structures of
Sm
LTL were predicted and analyzed, indicating that the
Sm
LTL protein was hydrophilic, contained 5.36% α-helices, 39.29% extended strands, 16.07% β-folds, and 39.29% random coils, and three β-folds. Quantitative realtime polymerase chain reaction (qPCR) analysis revealed that the
Sm
LTL mRNA was abundantly expressed in skin, gill, and intestine. Low levels of
Sm
LTL expression were observed in other tissues. The expression of
Sm
LTL in gill, skin and intestine increased at mRNA level after stimulation of Vibrio anguillarum, our results suggest that
Sm
LTL serve as the first line of defence against microbial infections and play a pivotal role in the innate mucosal immune system. The current study indicates that
Sm
LTL is a member of the lilytype lectin family and the information reported here will provide an important foundation for future research on the role of this protein.</description><subject>Amino acids</subject><subject>Bacteria</subject><subject>Binding sites</subject><subject>Biology</subject><subject>Complementary DNA</subject><subject>Earth and Environmental Science</subject><subject>Earth Sciences</subject><subject>Fish</subject><subject>Helices</subject><subject>Immune system</subject><subject>Immunity</subject><subject>Intestine</subject><subject>Intestines</subject><subject>Lectins</subject><subject>Mannose</subject><subject>Marine fishes</subject><subject>Microorganisms</subject><subject>mRNA</subject><subject>Mucosal immunity</subject><subject>Nucleotide sequence</subject><subject>Oceanography</subject><subject>Open reading frames</subject><subject>PCR</subject><subject>Polymerase chain reaction</subject><subject>Proteins</subject><subject>Scophthalmus maximus</subject><subject>Tertiary</subject><subject>Vibrio anguillarum</subject><issn>2096-5508</issn><issn>2523-3521</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp1UU1LxDAULKLgsvoDvAW8KBh9SZq0e5TFL6h48OMa0mzqZmmbmqTg-j_8v0YrePL05vFmhjdMlh0ROCcAxUUAYDnDQAosqCgx2clmlFOGGadkN2FYCMw5lPvZYQgbAKBQUuB8ln3eu9bosVUe6bXySkfj7YeK1vVI9Stk3gdvQphW1W6DDcg1qLLtFsftYFBSR9ujk8eueqpOUYJx9LWL6FG7YR3Xqu3GgDr1btM8-_G0MaBkOrg-GBQderG1ty6dXkfbpk_G7iDba1QbzOHvnGfP11dPy1tcPdzcLS8rrBkRETe0hJUQueaKFUVtyoVZ0UKvQAnOuU45a6OJFilpA4ISKIq8FgJyw4iGgrF5djz5Dt69jSZEuXGjTzmDpAtSEliUIk8sMrG0dyF408jB2075rSQgvwuQUwEyFSC_C5AkaeikCYnbvxr_5_y_6AuqGYom</recordid><startdate>20180301</startdate><enddate>20180301</enddate><creator>Xia, Dandan</creator><creator>Ma, Aijun</creator><creator>Huang, Zhihui</creator><creator>Shang, Xiaomei</creator><creator>Cui, Wenxiao</creator><creator>Yang, Zhi</creator><creator>Qu, Jiangbo</creator><general>Science Press</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QH</scope><scope>7QL</scope><scope>7SN</scope><scope>7TN</scope><scope>7U7</scope><scope>7UA</scope><scope>7XB</scope><scope>88I</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>GNUQQ</scope><scope>H96</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>M2P</scope><scope>M7N</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope></search><sort><creationdate>20180301</creationdate><title>Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum</title><author>Xia, Dandan ; Ma, Aijun ; Huang, Zhihui ; Shang, Xiaomei ; Cui, Wenxiao ; Yang, Zhi ; Qu, Jiangbo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Amino acids</topic><topic>Bacteria</topic><topic>Binding sites</topic><topic>Biology</topic><topic>Complementary DNA</topic><topic>Earth and Environmental Science</topic><topic>Earth Sciences</topic><topic>Fish</topic><topic>Helices</topic><topic>Immune system</topic><topic>Immunity</topic><topic>Intestine</topic><topic>Intestines</topic><topic>Lectins</topic><topic>Mannose</topic><topic>Marine fishes</topic><topic>Microorganisms</topic><topic>mRNA</topic><topic>Mucosal immunity</topic><topic>Nucleotide sequence</topic><topic>Oceanography</topic><topic>Open reading frames</topic><topic>PCR</topic><topic>Polymerase chain reaction</topic><topic>Proteins</topic><topic>Scophthalmus maximus</topic><topic>Tertiary</topic><topic>Vibrio anguillarum</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xia, Dandan</creatorcontrib><creatorcontrib>Ma, Aijun</creatorcontrib><creatorcontrib>Huang, Zhihui</creatorcontrib><creatorcontrib>Shang, Xiaomei</creatorcontrib><creatorcontrib>Cui, Wenxiao</creatorcontrib><creatorcontrib>Yang, Zhi</creatorcontrib><creatorcontrib>Qu, Jiangbo</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Aqualine</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Water Resources Abstracts</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Science Journals</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><jtitle>Journal of oceanology and limnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xia, Dandan</au><au>Ma, Aijun</au><au>Huang, Zhihui</au><au>Shang, Xiaomei</au><au>Cui, Wenxiao</au><au>Yang, Zhi</au><au>Qu, Jiangbo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum</atitle><jtitle>Journal of oceanology and limnology</jtitle><stitle>J. Ocean. Limnol</stitle><date>2018-03-01</date><risdate>2018</risdate><volume>36</volume><issue>2</issue><spage>508</spage><epage>518</epage><pages>508-518</pages><issn>2096-5508</issn><eissn>2523-3521</eissn><abstract>A full-length lily-type lectin (
Sm
LTL) was identified from turbot (
Scophthalmus maximus
) in this study. By searching database for protein identification and function prediction,
Sm
LTL were confirmed. The full-length cDNA of
Sm
LTL is composed of 569 bp and contains a 339 bp ORF that encodes 112 amino acid residues. The
Sm
LTL peptide is characterized by a specific β-prism architecture and contains three mannose binding sites in a three-fold internal repeat between amino acids 30–99; two of the repeats share the classical mannose binding domain (QxDxNxVxY) while the third binding site was similar to other fish-specific binding motifs (TxTxGxRxV). The primary, secondary, and tertiary structures of
Sm
LTL were predicted and analyzed, indicating that the
Sm
LTL protein was hydrophilic, contained 5.36% α-helices, 39.29% extended strands, 16.07% β-folds, and 39.29% random coils, and three β-folds. Quantitative realtime polymerase chain reaction (qPCR) analysis revealed that the
Sm
LTL mRNA was abundantly expressed in skin, gill, and intestine. Low levels of
Sm
LTL expression were observed in other tissues. The expression of
Sm
LTL in gill, skin and intestine increased at mRNA level after stimulation of Vibrio anguillarum, our results suggest that
Sm
LTL serve as the first line of defence against microbial infections and play a pivotal role in the innate mucosal immune system. The current study indicates that
Sm
LTL is a member of the lilytype lectin family and the information reported here will provide an important foundation for future research on the role of this protein.</abstract><cop>Heidelberg</cop><pub>Science Press</pub><doi>10.1007/s00343-017-6268-1</doi><tpages>11</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2096-5508 |
ispartof | Journal of oceanology and limnology, 2018-03, Vol.36 (2), p.508-518 |
issn | 2096-5508 2523-3521 |
language | eng |
recordid | cdi_proquest_journals_2918109864 |
source | Springer Link |
subjects | Amino acids Bacteria Binding sites Biology Complementary DNA Earth and Environmental Science Earth Sciences Fish Helices Immune system Immunity Intestine Intestines Lectins Mannose Marine fishes Microorganisms mRNA Mucosal immunity Nucleotide sequence Oceanography Open reading frames PCR Polymerase chain reaction Proteins Scophthalmus maximus Tertiary Vibrio anguillarum |
title | Molecular characterization and expression analysis of Lily-type lectin (SmLTL) in turbot Scophthalmus maximus, and its response to Vibrio anguillarum |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T14%3A02%3A52IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Molecular%20characterization%20and%20expression%20analysis%20of%20Lily-type%20lectin%20(SmLTL)%20in%20turbot%20Scophthalmus%20maximus,%20and%20its%20response%20to%20Vibrio%20anguillarum&rft.jtitle=Journal%20of%20oceanology%20and%20limnology&rft.au=Xia,%20Dandan&rft.date=2018-03-01&rft.volume=36&rft.issue=2&rft.spage=508&rft.epage=518&rft.pages=508-518&rft.issn=2096-5508&rft.eissn=2523-3521&rft_id=info:doi/10.1007/s00343-017-6268-1&rft_dat=%3Cproquest_cross%3E2918109864%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c316t-f280d664c5a377be89ed27cd0a6555c000bec1c6055f06210774b6604e31c0733%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2918109864&rft_id=info:pmid/&rfr_iscdi=true |