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Occurrence and molecular characterization of enteropathogenic Escherichia coli serotypes isolated from children with diarrhoea in Najaf, Iraq
Purpose: Enteropathogenic Escherichia coli (EPEC) are among the most important pathogens infecting children worldwide and are one of the main causes of diarrhoea. The study was carried out to investigate the occurrence of EPEC as a cause of infectious diarrhoea in children younger than 2 years of ag...
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Published in: | Indian journal of medical microbiology 2011-10, Vol.29 (4), p.383-388 |
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description | Purpose: Enteropathogenic Escherichia coli (EPEC) are among the most important pathogens infecting children worldwide and are one of the main causes of diarrhoea. The study was carried out to investigate the occurrence of EPEC as a cause of infectious diarrhoea in children younger than 2 years of age and characterize their virulence genes. Materials andMethods: During the study period, a total of 656 faecal specimens from children with diarrhoea and 54 from healthy children were analyzed. E. coli isolates were serotypically identified with EPEC polyvalent and monovalent antisera. The isolated EPEC were examined for the presence of the attaching and effacing (eaeA), bundle-forming pilus (bfpA), Shiga like toxins (stx1 and stx2), enterohaemorrhagic E. coli enterohaemolysin (EHEC hlyA) and EPEC adherence factor (EAF) genes by the PCR assay. Results: The study has shown that 22 (3.4%) had diarrhoea due to EPEC, while no EPEC isolates were detected in asymptomatic children. The highest number of the EPEC isolated belonging to polyvalent 2. The primers encoding virulence genes were subjected to all the EPEC isolates. Only 9.1%, 27.3%, and 9.1% isolates gave positive re sults with intimin (eaeA), bfbA and (EAF) genes, respectively. None of the isolates were positive for stx1, stx2, and hlyA genes. Typical EPEC (eaeA+, bfpA+) was diagnosed in two isolates, while, atypical EPEC was manifested in four isolates. Conclusions: According to the results, the frequency of EPEC isolates in Najaf was lower than what has been suspected and the investigation including the use of molecular technique and serotyping, are necessary to allow precise identification and epidemiological study of these pathogens. |
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The study was carried out to investigate the occurrence of EPEC as a cause of infectious diarrhoea in children younger than 2 years of age and characterize their virulence genes. Materials andMethods: During the study period, a total of 656 faecal specimens from children with diarrhoea and 54 from healthy children were analyzed. E. coli isolates were serotypically identified with EPEC polyvalent and monovalent antisera. The isolated EPEC were examined for the presence of the attaching and effacing (eaeA), bundle-forming pilus (bfpA), Shiga like toxins (stx1 and stx2), enterohaemorrhagic E. coli enterohaemolysin (EHEC hlyA) and EPEC adherence factor (EAF) genes by the PCR assay. Results: The study has shown that 22 (3.4%) had diarrhoea due to EPEC, while no EPEC isolates were detected in asymptomatic children. The highest number of the EPEC isolated belonging to polyvalent 2. The primers encoding virulence genes were subjected to all the EPEC isolates. Only 9.1%, 27.3%, and 9.1% isolates gave positive re sults with intimin (eaeA), bfbA and (EAF) genes, respectively. None of the isolates were positive for stx1, stx2, and hlyA genes. Typical EPEC (eaeA+, bfpA+) was diagnosed in two isolates, while, atypical EPEC was manifested in four isolates. Conclusions: According to the results, the frequency of EPEC isolates in Najaf was lower than what has been suspected and the investigation including the use of molecular technique and serotyping, are necessary to allow precise identification and epidemiological study of these pathogens.</description><identifier>ISSN: 0255-0857</identifier><identifier>EISSN: 1998-3646</identifier><identifier>DOI: 10.4103/0255-0857.90171</identifier><language>eng</language><publisher>Chandigarh: Elsevier B.V</publisher><subject>Age ; Antisera ; Atypical EPEC ; bundle-forming pilus ; Children ; Diarrhea ; enteropathogenic Escherichia coli ; Escherichia coli ; Intimin ; Pathogens ; Polymerase chain reaction ; Primers ; Serotypes ; Serotyping ; Toxins ; typical Enteropathogenic Escherichia coli ; Virulence</subject><ispartof>Indian journal of medical microbiology, 2011-10, Vol.29 (4), p.383-388</ispartof><rights>2011 Indian Journal of Medical Microbiology</rights><rights>Copyright Medknow Publications & Media Pvt Ltd Oct 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c447t-23ed9dbd060234cc60d0c9e64617c94b4d0c0d300c01f5b88208e80f1d759173</citedby><cites>FETCH-LOGICAL-c447t-23ed9dbd060234cc60d0c9e64617c94b4d0c0d300c01f5b88208e80f1d759173</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/906730981/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/906730981?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,777,781,25734,27905,27906,36993,36994,44571,74875</link.rule.ids></links><search><creatorcontrib>Al-Hilali, Samer A</creatorcontrib><creatorcontrib>Almohana, Ali M</creatorcontrib><title>Occurrence and molecular characterization of enteropathogenic Escherichia coli serotypes isolated from children with diarrhoea in Najaf, Iraq</title><title>Indian journal of medical microbiology</title><description>Purpose: Enteropathogenic Escherichia coli (EPEC) are among the most important pathogens infecting children worldwide and are one of the main causes of diarrhoea. The study was carried out to investigate the occurrence of EPEC as a cause of infectious diarrhoea in children younger than 2 years of age and characterize their virulence genes. Materials andMethods: During the study period, a total of 656 faecal specimens from children with diarrhoea and 54 from healthy children were analyzed. E. coli isolates were serotypically identified with EPEC polyvalent and monovalent antisera. The isolated EPEC were examined for the presence of the attaching and effacing (eaeA), bundle-forming pilus (bfpA), Shiga like toxins (stx1 and stx2), enterohaemorrhagic E. coli enterohaemolysin (EHEC hlyA) and EPEC adherence factor (EAF) genes by the PCR assay. Results: The study has shown that 22 (3.4%) had diarrhoea due to EPEC, while no EPEC isolates were detected in asymptomatic children. The highest number of the EPEC isolated belonging to polyvalent 2. The primers encoding virulence genes were subjected to all the EPEC isolates. Only 9.1%, 27.3%, and 9.1% isolates gave positive re sults with intimin (eaeA), bfbA and (EAF) genes, respectively. None of the isolates were positive for stx1, stx2, and hlyA genes. Typical EPEC (eaeA+, bfpA+) was diagnosed in two isolates, while, atypical EPEC was manifested in four isolates. Conclusions: According to the results, the frequency of EPEC isolates in Najaf was lower than what has been suspected and the investigation including the use of molecular technique and serotyping, are necessary to allow precise identification and epidemiological study of these pathogens.</description><subject>Age</subject><subject>Antisera</subject><subject>Atypical EPEC</subject><subject>bundle-forming pilus</subject><subject>Children</subject><subject>Diarrhea</subject><subject>enteropathogenic Escherichia coli</subject><subject>Escherichia coli</subject><subject>Intimin</subject><subject>Pathogens</subject><subject>Polymerase chain reaction</subject><subject>Primers</subject><subject>Serotypes</subject><subject>Serotyping</subject><subject>Toxins</subject><subject>typical Enteropathogenic Escherichia coli</subject><subject>Virulence</subject><issn>0255-0857</issn><issn>1998-3646</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNp1UctuFDEQtFAisUk4c7U4cWASe8fz8BFFCUSKyCV3y9vuYbyaHW_aHlDyD_wzvWzEAYmLrVJXld1VQrzX6tJoVV-pddNUqm-6S6t0p9-Ilba2r-rWtCdi9Xf6VpzlvFWMjTUr8esBYCHCGVD6OchdmhCWyZOE0ZOHghRffIlplmmQODNOe1_G9B3nCPImw8gMGKOXkKYoM8_L8x6zjDlNvmCQA6Udu8Up8DPyZyyjDNETjQm9jLP85rd--CTvyD9diNPBTxnfvd7n4vH25vH6a3X_8OXu-vN9BcZ0pVrXGGzYBNWqdW0AWhUUWORNdQfWbAxDFWrFpx6aTd-vVY-9GnToGqu7-lx8PNruKT0tmIvbxQw4TX7GtGSnFQs4H9sy9cM_1G1aaObPOavarla210y6OpKAUs6Eg9tT3Hl6Zid3KMcd4neH-N2fclhhjwrkLX9EJJchHkoIkRCKCyn-V_sb10GV8w</recordid><startdate>20111001</startdate><enddate>20111001</enddate><creator>Al-Hilali, Samer A</creator><creator>Almohana, Ali M</creator><general>Elsevier B.V</general><general>Elsevier Limited</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope></search><sort><creationdate>20111001</creationdate><title>Occurrence and molecular characterization of enteropathogenic Escherichia coli serotypes isolated from children with diarrhoea in Najaf, Iraq</title><author>Al-Hilali, Samer A ; Almohana, Ali M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-23ed9dbd060234cc60d0c9e64617c94b4d0c0d300c01f5b88208e80f1d759173</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Age</topic><topic>Antisera</topic><topic>Atypical EPEC</topic><topic>bundle-forming pilus</topic><topic>Children</topic><topic>Diarrhea</topic><topic>enteropathogenic Escherichia coli</topic><topic>Escherichia coli</topic><topic>Intimin</topic><topic>Pathogens</topic><topic>Polymerase chain reaction</topic><topic>Primers</topic><topic>Serotypes</topic><topic>Serotyping</topic><topic>Toxins</topic><topic>typical Enteropathogenic Escherichia coli</topic><topic>Virulence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Al-Hilali, Samer A</creatorcontrib><creatorcontrib>Almohana, Ali M</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health Medical collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest research library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><jtitle>Indian journal of medical microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Al-Hilali, Samer A</au><au>Almohana, Ali M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Occurrence and molecular characterization of enteropathogenic Escherichia coli serotypes isolated from children with diarrhoea in Najaf, Iraq</atitle><jtitle>Indian journal of medical microbiology</jtitle><date>2011-10-01</date><risdate>2011</risdate><volume>29</volume><issue>4</issue><spage>383</spage><epage>388</epage><pages>383-388</pages><issn>0255-0857</issn><eissn>1998-3646</eissn><abstract>Purpose: Enteropathogenic Escherichia coli (EPEC) are among the most important pathogens infecting children worldwide and are one of the main causes of diarrhoea. The study was carried out to investigate the occurrence of EPEC as a cause of infectious diarrhoea in children younger than 2 years of age and characterize their virulence genes. Materials andMethods: During the study period, a total of 656 faecal specimens from children with diarrhoea and 54 from healthy children were analyzed. E. coli isolates were serotypically identified with EPEC polyvalent and monovalent antisera. The isolated EPEC were examined for the presence of the attaching and effacing (eaeA), bundle-forming pilus (bfpA), Shiga like toxins (stx1 and stx2), enterohaemorrhagic E. coli enterohaemolysin (EHEC hlyA) and EPEC adherence factor (EAF) genes by the PCR assay. Results: The study has shown that 22 (3.4%) had diarrhoea due to EPEC, while no EPEC isolates were detected in asymptomatic children. The highest number of the EPEC isolated belonging to polyvalent 2. The primers encoding virulence genes were subjected to all the EPEC isolates. Only 9.1%, 27.3%, and 9.1% isolates gave positive re sults with intimin (eaeA), bfbA and (EAF) genes, respectively. None of the isolates were positive for stx1, stx2, and hlyA genes. Typical EPEC (eaeA+, bfpA+) was diagnosed in two isolates, while, atypical EPEC was manifested in four isolates. Conclusions: According to the results, the frequency of EPEC isolates in Najaf was lower than what has been suspected and the investigation including the use of molecular technique and serotyping, are necessary to allow precise identification and epidemiological study of these pathogens.</abstract><cop>Chandigarh</cop><pub>Elsevier B.V</pub><doi>10.4103/0255-0857.90171</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Age Antisera Atypical EPEC bundle-forming pilus Children Diarrhea enteropathogenic Escherichia coli Escherichia coli Intimin Pathogens Polymerase chain reaction Primers Serotypes Serotyping Toxins typical Enteropathogenic Escherichia coli Virulence |
title | Occurrence and molecular characterization of enteropathogenic Escherichia coli serotypes isolated from children with diarrhoea in Najaf, Iraq |
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