Loading…

Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols

Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiologi...

Full description

Saved in:
Bibliographic Details
Published in:Journal of bioscience and bioengineering 2012-11, Vol.114 (5), p.512-517
Main Authors: Zhang, Chunfang, Suzuki, Daisuke, Li, Zhiling, Ye, Lizhen, Katayama, Arata
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3
cites cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3
container_end_page 517
container_issue 5
container_start_page 512
container_title Journal of bioscience and bioengineering
container_volume 114
creator Zhang, Chunfang
Suzuki, Daisuke
Li, Zhiling
Ye, Lizhen
Katayama, Arata
description Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.
doi_str_mv 10.1016/j.jbiosc.2012.05.025
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1125228846</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1389172312002460</els_id><sourcerecordid>1041325279</sourcerecordid><originalsourceid>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</originalsourceid><addsrcrecordid>eNqFkV2L1TAQhoMo7rr6D0R7I3jTmpmmTXsjLItfsKCgex0mH7U59DQ16XFZf7059qh3epME5pm8wzyMPQVeAYf21a7aaR-SqZADVrypODb32DnUQpZCINw_vru-BIn1GXuU0o5zkFzCQ3aGKEWNvD5n_lOY7paRkjeFGSmSWV30P2j1YS7CUKy3odh7E4P2NBUmzCnE1VNx69cxH9YV1plxCtHPW09anFkjFUOIxa9CWEY3hyk9Zg8GmpJ7crov2M3bN1-u3pfXH999uLq8Lk0DzVp2KGHQXY0aUchem7bnNRngFp02kix0NgNWS6Nbss5J6ARh3dsWGmypvmAvt3-XGL4dXFrV3ifjpolmFw5JAWCD2HWi_T_KBdSZln1GxYbmVaQU3aCW6PcU7zKkjj7UTm0-1NGH4o3KPnLbs1PCQe-d_dP0W0AGXpwASoamIdJsfPrLtZLzbdTnGzdQUPQ1Zubmc05qebbKEY5RrzfC5eV-9y6qZLybjbM-ZiXKBv_vWX8CWYu1xg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1041325279</pqid></control><display><type>article</type><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><source>Elsevier</source><creator>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</creator><creatorcontrib>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</creatorcontrib><description>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</description><identifier>ISSN: 1389-1723</identifier><identifier>EISSN: 1347-4421</identifier><identifier>DOI: 10.1016/j.jbiosc.2012.05.025</identifier><identifier>PMID: 22743203</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>3,5-Dichlorophenol ; 3-Chlorophenol ; acetates ; Acetic acid ; Alkanesulfonic Acids - pharmacology ; Bacteria, Anaerobic - classification ; Bacteria, Anaerobic - genetics ; Bacteria, Anaerobic - metabolism ; Biological and medical sciences ; Biotechnology ; chloramphenicol ; chlorophenols ; Chlorophenols - metabolism ; Clostridium ; dechlorination ; Dehalobacter ; Dehalobacter spp ; Electrons ; Fundamental and applied biological sciences. Psychology ; genes ; iron oxides ; Microbial Consortia ; Microbial reductive dechlorination ; molybdates ; nitrates ; pentachlorophenol ; Pentachlorophenol - metabolism ; Phylogeny ; Physiological and phylogenetic characterization ; ribosomal RNA ; Soil Microbiology ; sulfates ; Sulfurospirillum ; Sulfurospirillum spp ; vancomycin</subject><ispartof>Journal of bioscience and bioengineering, 2012-11, Vol.114 (5), p.512-517</ispartof><rights>2012 The Society for Biotechnology, Japan</rights><rights>2014 INIST-CNRS</rights><rights>Copyright © 2012 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</citedby><cites>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=26700846$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22743203$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhang, Chunfang</creatorcontrib><creatorcontrib>Suzuki, Daisuke</creatorcontrib><creatorcontrib>Li, Zhiling</creatorcontrib><creatorcontrib>Ye, Lizhen</creatorcontrib><creatorcontrib>Katayama, Arata</creatorcontrib><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><title>Journal of bioscience and bioengineering</title><addtitle>J Biosci Bioeng</addtitle><description>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</description><subject>3,5-Dichlorophenol</subject><subject>3-Chlorophenol</subject><subject>acetates</subject><subject>Acetic acid</subject><subject>Alkanesulfonic Acids - pharmacology</subject><subject>Bacteria, Anaerobic - classification</subject><subject>Bacteria, Anaerobic - genetics</subject><subject>Bacteria, Anaerobic - metabolism</subject><subject>Biological and medical sciences</subject><subject>Biotechnology</subject><subject>chloramphenicol</subject><subject>chlorophenols</subject><subject>Chlorophenols - metabolism</subject><subject>Clostridium</subject><subject>dechlorination</subject><subject>Dehalobacter</subject><subject>Dehalobacter spp</subject><subject>Electrons</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>iron oxides</subject><subject>Microbial Consortia</subject><subject>Microbial reductive dechlorination</subject><subject>molybdates</subject><subject>nitrates</subject><subject>pentachlorophenol</subject><subject>Pentachlorophenol - metabolism</subject><subject>Phylogeny</subject><subject>Physiological and phylogenetic characterization</subject><subject>ribosomal RNA</subject><subject>Soil Microbiology</subject><subject>sulfates</subject><subject>Sulfurospirillum</subject><subject>Sulfurospirillum spp</subject><subject>vancomycin</subject><issn>1389-1723</issn><issn>1347-4421</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqFkV2L1TAQhoMo7rr6D0R7I3jTmpmmTXsjLItfsKCgex0mH7U59DQ16XFZf7059qh3epME5pm8wzyMPQVeAYf21a7aaR-SqZADVrypODb32DnUQpZCINw_vru-BIn1GXuU0o5zkFzCQ3aGKEWNvD5n_lOY7paRkjeFGSmSWV30P2j1YS7CUKy3odh7E4P2NBUmzCnE1VNx69cxH9YV1plxCtHPW09anFkjFUOIxa9CWEY3hyk9Zg8GmpJ7crov2M3bN1-u3pfXH999uLq8Lk0DzVp2KGHQXY0aUchem7bnNRngFp02kix0NgNWS6Nbss5J6ARh3dsWGmypvmAvt3-XGL4dXFrV3ifjpolmFw5JAWCD2HWi_T_KBdSZln1GxYbmVaQU3aCW6PcU7zKkjj7UTm0-1NGH4o3KPnLbs1PCQe-d_dP0W0AGXpwASoamIdJsfPrLtZLzbdTnGzdQUPQ1Zubmc05qebbKEY5RrzfC5eV-9y6qZLybjbM-ZiXKBv_vWX8CWYu1xg</recordid><startdate>20121101</startdate><enddate>20121101</enddate><creator>Zhang, Chunfang</creator><creator>Suzuki, Daisuke</creator><creator>Li, Zhiling</creator><creator>Ye, Lizhen</creator><creator>Katayama, Arata</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>20121101</creationdate><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><author>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>3,5-Dichlorophenol</topic><topic>3-Chlorophenol</topic><topic>acetates</topic><topic>Acetic acid</topic><topic>Alkanesulfonic Acids - pharmacology</topic><topic>Bacteria, Anaerobic - classification</topic><topic>Bacteria, Anaerobic - genetics</topic><topic>Bacteria, Anaerobic - metabolism</topic><topic>Biological and medical sciences</topic><topic>Biotechnology</topic><topic>chloramphenicol</topic><topic>chlorophenols</topic><topic>Chlorophenols - metabolism</topic><topic>Clostridium</topic><topic>dechlorination</topic><topic>Dehalobacter</topic><topic>Dehalobacter spp</topic><topic>Electrons</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>iron oxides</topic><topic>Microbial Consortia</topic><topic>Microbial reductive dechlorination</topic><topic>molybdates</topic><topic>nitrates</topic><topic>pentachlorophenol</topic><topic>Pentachlorophenol - metabolism</topic><topic>Phylogeny</topic><topic>Physiological and phylogenetic characterization</topic><topic>ribosomal RNA</topic><topic>Soil Microbiology</topic><topic>sulfates</topic><topic>Sulfurospirillum</topic><topic>Sulfurospirillum spp</topic><topic>vancomycin</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Chunfang</creatorcontrib><creatorcontrib>Suzuki, Daisuke</creatorcontrib><creatorcontrib>Li, Zhiling</creatorcontrib><creatorcontrib>Ye, Lizhen</creatorcontrib><creatorcontrib>Katayama, Arata</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of bioscience and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Chunfang</au><au>Suzuki, Daisuke</au><au>Li, Zhiling</au><au>Ye, Lizhen</au><au>Katayama, Arata</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</atitle><jtitle>Journal of bioscience and bioengineering</jtitle><addtitle>J Biosci Bioeng</addtitle><date>2012-11-01</date><risdate>2012</risdate><volume>114</volume><issue>5</issue><spage>512</spage><epage>517</epage><pages>512-517</pages><issn>1389-1723</issn><eissn>1347-4421</eissn><abstract>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>22743203</pmid><doi>10.1016/j.jbiosc.2012.05.025</doi><tpages>6</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1389-1723
ispartof Journal of bioscience and bioengineering, 2012-11, Vol.114 (5), p.512-517
issn 1389-1723
1347-4421
language eng
recordid cdi_proquest_miscellaneous_1125228846
source Elsevier
subjects 3,5-Dichlorophenol
3-Chlorophenol
acetates
Acetic acid
Alkanesulfonic Acids - pharmacology
Bacteria, Anaerobic - classification
Bacteria, Anaerobic - genetics
Bacteria, Anaerobic - metabolism
Biological and medical sciences
Biotechnology
chloramphenicol
chlorophenols
Chlorophenols - metabolism
Clostridium
dechlorination
Dehalobacter
Dehalobacter spp
Electrons
Fundamental and applied biological sciences. Psychology
genes
iron oxides
Microbial Consortia
Microbial reductive dechlorination
molybdates
nitrates
pentachlorophenol
Pentachlorophenol - metabolism
Phylogeny
Physiological and phylogenetic characterization
ribosomal RNA
Soil Microbiology
sulfates
Sulfurospirillum
Sulfurospirillum spp
vancomycin
title Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-12T15%3A41%3A52IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Polyphasic%20characterization%20of%20two%20microbial%20consortia%20with%20wide%20dechlorination%20spectra%20for%20chlorophenols&rft.jtitle=Journal%20of%20bioscience%20and%20bioengineering&rft.au=Zhang,%20Chunfang&rft.date=2012-11-01&rft.volume=114&rft.issue=5&rft.spage=512&rft.epage=517&rft.pages=512-517&rft.issn=1389-1723&rft.eissn=1347-4421&rft_id=info:doi/10.1016/j.jbiosc.2012.05.025&rft_dat=%3Cproquest_cross%3E1041325279%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1041325279&rft_id=info:pmid/22743203&rfr_iscdi=true