Loading…
Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols
Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiologi...
Saved in:
Published in: | Journal of bioscience and bioengineering 2012-11, Vol.114 (5), p.512-517 |
---|---|
Main Authors: | , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3 |
---|---|
cites | cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3 |
container_end_page | 517 |
container_issue | 5 |
container_start_page | 512 |
container_title | Journal of bioscience and bioengineering |
container_volume | 114 |
creator | Zhang, Chunfang Suzuki, Daisuke Li, Zhiling Ye, Lizhen Katayama, Arata |
description | Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures. |
doi_str_mv | 10.1016/j.jbiosc.2012.05.025 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1125228846</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1389172312002460</els_id><sourcerecordid>1041325279</sourcerecordid><originalsourceid>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</originalsourceid><addsrcrecordid>eNqFkV2L1TAQhoMo7rr6D0R7I3jTmpmmTXsjLItfsKCgex0mH7U59DQ16XFZf7059qh3epME5pm8wzyMPQVeAYf21a7aaR-SqZADVrypODb32DnUQpZCINw_vru-BIn1GXuU0o5zkFzCQ3aGKEWNvD5n_lOY7paRkjeFGSmSWV30P2j1YS7CUKy3odh7E4P2NBUmzCnE1VNx69cxH9YV1plxCtHPW09anFkjFUOIxa9CWEY3hyk9Zg8GmpJ7crov2M3bN1-u3pfXH999uLq8Lk0DzVp2KGHQXY0aUchem7bnNRngFp02kix0NgNWS6Nbss5J6ARh3dsWGmypvmAvt3-XGL4dXFrV3ifjpolmFw5JAWCD2HWi_T_KBdSZln1GxYbmVaQU3aCW6PcU7zKkjj7UTm0-1NGH4o3KPnLbs1PCQe-d_dP0W0AGXpwASoamIdJsfPrLtZLzbdTnGzdQUPQ1Zubmc05qebbKEY5RrzfC5eV-9y6qZLybjbM-ZiXKBv_vWX8CWYu1xg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1041325279</pqid></control><display><type>article</type><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><source>Elsevier</source><creator>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</creator><creatorcontrib>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</creatorcontrib><description>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</description><identifier>ISSN: 1389-1723</identifier><identifier>EISSN: 1347-4421</identifier><identifier>DOI: 10.1016/j.jbiosc.2012.05.025</identifier><identifier>PMID: 22743203</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>3,5-Dichlorophenol ; 3-Chlorophenol ; acetates ; Acetic acid ; Alkanesulfonic Acids - pharmacology ; Bacteria, Anaerobic - classification ; Bacteria, Anaerobic - genetics ; Bacteria, Anaerobic - metabolism ; Biological and medical sciences ; Biotechnology ; chloramphenicol ; chlorophenols ; Chlorophenols - metabolism ; Clostridium ; dechlorination ; Dehalobacter ; Dehalobacter spp ; Electrons ; Fundamental and applied biological sciences. Psychology ; genes ; iron oxides ; Microbial Consortia ; Microbial reductive dechlorination ; molybdates ; nitrates ; pentachlorophenol ; Pentachlorophenol - metabolism ; Phylogeny ; Physiological and phylogenetic characterization ; ribosomal RNA ; Soil Microbiology ; sulfates ; Sulfurospirillum ; Sulfurospirillum spp ; vancomycin</subject><ispartof>Journal of bioscience and bioengineering, 2012-11, Vol.114 (5), p.512-517</ispartof><rights>2012 The Society for Biotechnology, Japan</rights><rights>2014 INIST-CNRS</rights><rights>Copyright © 2012 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</citedby><cites>FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26700846$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22743203$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhang, Chunfang</creatorcontrib><creatorcontrib>Suzuki, Daisuke</creatorcontrib><creatorcontrib>Li, Zhiling</creatorcontrib><creatorcontrib>Ye, Lizhen</creatorcontrib><creatorcontrib>Katayama, Arata</creatorcontrib><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><title>Journal of bioscience and bioengineering</title><addtitle>J Biosci Bioeng</addtitle><description>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</description><subject>3,5-Dichlorophenol</subject><subject>3-Chlorophenol</subject><subject>acetates</subject><subject>Acetic acid</subject><subject>Alkanesulfonic Acids - pharmacology</subject><subject>Bacteria, Anaerobic - classification</subject><subject>Bacteria, Anaerobic - genetics</subject><subject>Bacteria, Anaerobic - metabolism</subject><subject>Biological and medical sciences</subject><subject>Biotechnology</subject><subject>chloramphenicol</subject><subject>chlorophenols</subject><subject>Chlorophenols - metabolism</subject><subject>Clostridium</subject><subject>dechlorination</subject><subject>Dehalobacter</subject><subject>Dehalobacter spp</subject><subject>Electrons</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>iron oxides</subject><subject>Microbial Consortia</subject><subject>Microbial reductive dechlorination</subject><subject>molybdates</subject><subject>nitrates</subject><subject>pentachlorophenol</subject><subject>Pentachlorophenol - metabolism</subject><subject>Phylogeny</subject><subject>Physiological and phylogenetic characterization</subject><subject>ribosomal RNA</subject><subject>Soil Microbiology</subject><subject>sulfates</subject><subject>Sulfurospirillum</subject><subject>Sulfurospirillum spp</subject><subject>vancomycin</subject><issn>1389-1723</issn><issn>1347-4421</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqFkV2L1TAQhoMo7rr6D0R7I3jTmpmmTXsjLItfsKCgex0mH7U59DQ16XFZf7059qh3epME5pm8wzyMPQVeAYf21a7aaR-SqZADVrypODb32DnUQpZCINw_vru-BIn1GXuU0o5zkFzCQ3aGKEWNvD5n_lOY7paRkjeFGSmSWV30P2j1YS7CUKy3odh7E4P2NBUmzCnE1VNx69cxH9YV1plxCtHPW09anFkjFUOIxa9CWEY3hyk9Zg8GmpJ7crov2M3bN1-u3pfXH999uLq8Lk0DzVp2KGHQXY0aUchem7bnNRngFp02kix0NgNWS6Nbss5J6ARh3dsWGmypvmAvt3-XGL4dXFrV3ifjpolmFw5JAWCD2HWi_T_KBdSZln1GxYbmVaQU3aCW6PcU7zKkjj7UTm0-1NGH4o3KPnLbs1PCQe-d_dP0W0AGXpwASoamIdJsfPrLtZLzbdTnGzdQUPQ1Zubmc05qebbKEY5RrzfC5eV-9y6qZLybjbM-ZiXKBv_vWX8CWYu1xg</recordid><startdate>20121101</startdate><enddate>20121101</enddate><creator>Zhang, Chunfang</creator><creator>Suzuki, Daisuke</creator><creator>Li, Zhiling</creator><creator>Ye, Lizhen</creator><creator>Katayama, Arata</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>20121101</creationdate><title>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</title><author>Zhang, Chunfang ; Suzuki, Daisuke ; Li, Zhiling ; Ye, Lizhen ; Katayama, Arata</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>3,5-Dichlorophenol</topic><topic>3-Chlorophenol</topic><topic>acetates</topic><topic>Acetic acid</topic><topic>Alkanesulfonic Acids - pharmacology</topic><topic>Bacteria, Anaerobic - classification</topic><topic>Bacteria, Anaerobic - genetics</topic><topic>Bacteria, Anaerobic - metabolism</topic><topic>Biological and medical sciences</topic><topic>Biotechnology</topic><topic>chloramphenicol</topic><topic>chlorophenols</topic><topic>Chlorophenols - metabolism</topic><topic>Clostridium</topic><topic>dechlorination</topic><topic>Dehalobacter</topic><topic>Dehalobacter spp</topic><topic>Electrons</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>iron oxides</topic><topic>Microbial Consortia</topic><topic>Microbial reductive dechlorination</topic><topic>molybdates</topic><topic>nitrates</topic><topic>pentachlorophenol</topic><topic>Pentachlorophenol - metabolism</topic><topic>Phylogeny</topic><topic>Physiological and phylogenetic characterization</topic><topic>ribosomal RNA</topic><topic>Soil Microbiology</topic><topic>sulfates</topic><topic>Sulfurospirillum</topic><topic>Sulfurospirillum spp</topic><topic>vancomycin</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Chunfang</creatorcontrib><creatorcontrib>Suzuki, Daisuke</creatorcontrib><creatorcontrib>Li, Zhiling</creatorcontrib><creatorcontrib>Ye, Lizhen</creatorcontrib><creatorcontrib>Katayama, Arata</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of bioscience and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Chunfang</au><au>Suzuki, Daisuke</au><au>Li, Zhiling</au><au>Ye, Lizhen</au><au>Katayama, Arata</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols</atitle><jtitle>Journal of bioscience and bioengineering</jtitle><addtitle>J Biosci Bioeng</addtitle><date>2012-11-01</date><risdate>2012</risdate><volume>114</volume><issue>5</issue><spage>512</spage><epage>517</epage><pages>512-517</pages><issn>1389-1723</issn><eissn>1347-4421</eissn><abstract>Two soil-free anaerobic dechlorinating cultures (3-CP and 35-DCP) were enriched from a pentachlorophenol (PCP)-to-phenol dechlorinating soil-dependent culture, using 3-chlorophenol (3-CP) and 3,5-dichlorophenol (3,5-DCP) as specific respective substrates, and characterized polyphasically. Physiological characterization indicated that the 3-CP and 35-DCP cultures had similar features, but with some variations. Both cultures utilized formate or acetate preferably as optimum electron donors for reductive dechlorination, and they shared similar patterns of dechlorination spectra for chlorophenols ranging from mono-CPs to a tetra-CP, with preferred dechlorination pathways in the ortho and meta positions. Alternative electron acceptors such as NO3− but not SO42− inhibited the dechlorination activity in both cultures, while amorphous iron oxides (FeOOH) suppressed dechlorination activity only in the 35-DCP culture. Complete inhibition of dechlorination was observed in both cultures supplemented with chloramphenicol and vancomycin. The addition of 2-bromoethanesulfonate resulted in delayed dechlorination activity in the 35-DCP culture but not in the 3-CP culture; molybdate did not exert any inhibitory effect in either culture. Phylogenetic analysis based on 16S rRNA genes confirmed that the two cultures exhibited similar bacterial species but with varied responsible dechlorinators. Dehalobacter spp. were the likely dechlorinators in the 3-CP culture versus Sulfurospirillum spp. in the 35-DCP culture, with Clostridium and Clostridium-like spp. as candidate dechlorinators in both cultures.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>22743203</pmid><doi>10.1016/j.jbiosc.2012.05.025</doi><tpages>6</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1389-1723 |
ispartof | Journal of bioscience and bioengineering, 2012-11, Vol.114 (5), p.512-517 |
issn | 1389-1723 1347-4421 |
language | eng |
recordid | cdi_proquest_miscellaneous_1125228846 |
source | Elsevier |
subjects | 3,5-Dichlorophenol 3-Chlorophenol acetates Acetic acid Alkanesulfonic Acids - pharmacology Bacteria, Anaerobic - classification Bacteria, Anaerobic - genetics Bacteria, Anaerobic - metabolism Biological and medical sciences Biotechnology chloramphenicol chlorophenols Chlorophenols - metabolism Clostridium dechlorination Dehalobacter Dehalobacter spp Electrons Fundamental and applied biological sciences. Psychology genes iron oxides Microbial Consortia Microbial reductive dechlorination molybdates nitrates pentachlorophenol Pentachlorophenol - metabolism Phylogeny Physiological and phylogenetic characterization ribosomal RNA Soil Microbiology sulfates Sulfurospirillum Sulfurospirillum spp vancomycin |
title | Polyphasic characterization of two microbial consortia with wide dechlorination spectra for chlorophenols |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-12T15%3A41%3A52IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Polyphasic%20characterization%20of%20two%20microbial%20consortia%20with%20wide%20dechlorination%20spectra%20for%20chlorophenols&rft.jtitle=Journal%20of%20bioscience%20and%20bioengineering&rft.au=Zhang,%20Chunfang&rft.date=2012-11-01&rft.volume=114&rft.issue=5&rft.spage=512&rft.epage=517&rft.pages=512-517&rft.issn=1389-1723&rft.eissn=1347-4421&rft_id=info:doi/10.1016/j.jbiosc.2012.05.025&rft_dat=%3Cproquest_cross%3E1041325279%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c515t-8271fb832b22479bc6903ac10d2ebc7ad18d1fbdb7cb6adee7184a239d61526a3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1041325279&rft_id=info:pmid/22743203&rfr_iscdi=true |