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The Gut Bacteria Associated with Camponotus japonicus Mayr with Culture-Dependent and DGGE Methods
The bacterial composition and distribution in the different gut regions of Camponotus japonicus were investigated using both culture-dependent method and culture-independent method of polymerase chain reaction and denaturing gradient gel electrophoresis (PCR–DGGE). Five different bacterial strains w...
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Published in: | Current microbiology 2012-11, Vol.65 (5), p.610-616 |
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description | The bacterial composition and distribution in the different gut regions of
Camponotus japonicus
were investigated using both culture-dependent method and culture-independent method of polymerase chain reaction and denaturing gradient gel electrophoresis (PCR–DGGE). Five different bacterial strains were isolated using culture-dependent method, and they all belong to the phylum Firmicutes, including three genera of bacteria
Bacillus,
Paenibacillus,
and
Enterococcus
.
Bacillus cereus
and
Enterococcus mundtii
were found in the midgut;
Paenibacillus
sp. was isolated from the hindgut; and the other two
Bacillus
spp. were isolated from the crop. Twelve distinct DGGE bands were found using PCR–DGGE method, and their sequences blasting analysis shows that they are members of the Proteobacteria and the Firmicutes, respectively, including three genera (
Pseudomonas
,
Candidatus
Blochmannia,
Fructobacillus
) and one uncultured bacterium, in which
Pseudomonas
was the most dominant bacteria group in all the three gut regions. According to the DGGE profile, the three gut regions had very similar gut communities, and all the DGGE bands were presented in the midgut and hindgut, while just two bands representing
Blochmannia
were not present in the crop. The results of our study indicate that the gut of
C. japonicus
harbors several other bacteria besides the obligate endosymbionts
Blochmannia,
and more work should be carried on to verify if they are common in the guts of other
Camponotus
ants. |
doi_str_mv | 10.1007/s00284-012-0197-1 |
format | article |
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Camponotus japonicus
were investigated using both culture-dependent method and culture-independent method of polymerase chain reaction and denaturing gradient gel electrophoresis (PCR–DGGE). Five different bacterial strains were isolated using culture-dependent method, and they all belong to the phylum Firmicutes, including three genera of bacteria
Bacillus,
Paenibacillus,
and
Enterococcus
.
Bacillus cereus
and
Enterococcus mundtii
were found in the midgut;
Paenibacillus
sp. was isolated from the hindgut; and the other two
Bacillus
spp. were isolated from the crop. Twelve distinct DGGE bands were found using PCR–DGGE method, and their sequences blasting analysis shows that they are members of the Proteobacteria and the Firmicutes, respectively, including three genera (
Pseudomonas
,
Candidatus
Blochmannia,
Fructobacillus
) and one uncultured bacterium, in which
Pseudomonas
was the most dominant bacteria group in all the three gut regions. According to the DGGE profile, the three gut regions had very similar gut communities, and all the DGGE bands were presented in the midgut and hindgut, while just two bands representing
Blochmannia
were not present in the crop. The results of our study indicate that the gut of
C. japonicus
harbors several other bacteria besides the obligate endosymbionts
Blochmannia,
and more work should be carried on to verify if they are common in the guts of other
Camponotus
ants.</description><identifier>ISSN: 0343-8651</identifier><identifier>EISSN: 1432-0991</identifier><identifier>DOI: 10.1007/s00284-012-0197-1</identifier><identifier>PMID: 22878556</identifier><language>eng</language><publisher>New York: Springer-Verlag</publisher><subject>Animals ; Ants - microbiology ; Bacteria ; Bacteria - classification ; Bacteria - genetics ; Bacteria - growth & development ; Bacteria - isolation & purification ; Biomedical and Life Sciences ; Biotechnology ; Culture Media - metabolism ; Denaturing Gradient Gel Electrophoresis ; Digestive system ; Gastrointestinal Tract - microbiology ; Indexing in process ; Insects ; Life Sciences ; Microbiology ; Molecular Sequence Data ; Phylogeny ; Polymerase chain reaction ; Symbiosis</subject><ispartof>Current microbiology, 2012-11, Vol.65 (5), p.610-616</ispartof><rights>Springer Science+Business Media, LLC 2012</rights><rights>Springer Science+Business Media New York 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-d076a6f44b166b9dbc5b67963ee5500572a114d99f9b8644c99699d87f0825183</citedby><cites>FETCH-LOGICAL-c335t-d076a6f44b166b9dbc5b67963ee5500572a114d99f9b8644c99699d87f0825183</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22878556$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Xiaoping</creatorcontrib><creatorcontrib>Nan, Xiaoning</creatorcontrib><creatorcontrib>Wei, Cong</creatorcontrib><creatorcontrib>He, Hong</creatorcontrib><title>The Gut Bacteria Associated with Camponotus japonicus Mayr with Culture-Dependent and DGGE Methods</title><title>Current microbiology</title><addtitle>Curr Microbiol</addtitle><addtitle>Curr Microbiol</addtitle><description>The bacterial composition and distribution in the different gut regions of
Camponotus japonicus
were investigated using both culture-dependent method and culture-independent method of polymerase chain reaction and denaturing gradient gel electrophoresis (PCR–DGGE). Five different bacterial strains were isolated using culture-dependent method, and they all belong to the phylum Firmicutes, including three genera of bacteria
Bacillus,
Paenibacillus,
and
Enterococcus
.
Bacillus cereus
and
Enterococcus mundtii
were found in the midgut;
Paenibacillus
sp. was isolated from the hindgut; and the other two
Bacillus
spp. were isolated from the crop. Twelve distinct DGGE bands were found using PCR–DGGE method, and their sequences blasting analysis shows that they are members of the Proteobacteria and the Firmicutes, respectively, including three genera (
Pseudomonas
,
Candidatus
Blochmannia,
Fructobacillus
) and one uncultured bacterium, in which
Pseudomonas
was the most dominant bacteria group in all the three gut regions. According to the DGGE profile, the three gut regions had very similar gut communities, and all the DGGE bands were presented in the midgut and hindgut, while just two bands representing
Blochmannia
were not present in the crop. The results of our study indicate that the gut of
C. japonicus
harbors several other bacteria besides the obligate endosymbionts
Blochmannia,
and more work should be carried on to verify if they are common in the guts of other
Camponotus
ants.</description><subject>Animals</subject><subject>Ants - microbiology</subject><subject>Bacteria</subject><subject>Bacteria - classification</subject><subject>Bacteria - genetics</subject><subject>Bacteria - growth & development</subject><subject>Bacteria - isolation & purification</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Culture Media - metabolism</subject><subject>Denaturing Gradient Gel Electrophoresis</subject><subject>Digestive system</subject><subject>Gastrointestinal Tract - microbiology</subject><subject>Indexing in process</subject><subject>Insects</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Symbiosis</subject><issn>0343-8651</issn><issn>1432-0991</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqF0U1rGzEQBmARGmon6Q_opQh66WUTSavPo-s4TsAhl-S8aFez9Rp715W0hPz7TrATSqHkICQxz4wQLyFfObvkjJmrxJiwsmBc4HKm4CdkymWJN-f4JzJlpSwLqxWfkLOUNgyhY_wzmQhhjVVKT0n9uAa6HDP96ZsMsfN0ltLQdD5DoM9dXtO53-2HfshjohuPp67B071_icfyuM1jhOIa9tAH6DP1faDXy-WC3kNeDyFdkNPWbxN8Oe7n5Olm8Ti_LVYPy7v5bFU0ZalyEZjRXrdS1lzr2oW6UbU2TpcASjGmjPCcy-Bc62qrpWyc084Fa1pmheK2PCc_DnP3cfg9QsrVrksNbLe-h2FMFedCCYFd8mPKLLNWWGWQfv-HboYx9vgRVKZEggwVP6gmDilFaKt97HY-viCqXrOqDllVGEH1mlXFsefbcfJY7yC8d7yFg0AcQMJS_wvi30__b-of69ucIQ</recordid><startdate>20121101</startdate><enddate>20121101</enddate><creator>Li, Xiaoping</creator><creator>Nan, Xiaoning</creator><creator>Wei, Cong</creator><creator>He, Hong</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20121101</creationdate><title>The Gut Bacteria Associated with Camponotus japonicus Mayr with Culture-Dependent and DGGE Methods</title><author>Li, Xiaoping ; Nan, Xiaoning ; Wei, Cong ; He, Hong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-d076a6f44b166b9dbc5b67963ee5500572a114d99f9b8644c99699d87f0825183</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Ants - microbiology</topic><topic>Bacteria</topic><topic>Bacteria - classification</topic><topic>Bacteria - genetics</topic><topic>Bacteria - growth & development</topic><topic>Bacteria - isolation & purification</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Culture Media - metabolism</topic><topic>Denaturing Gradient Gel Electrophoresis</topic><topic>Digestive system</topic><topic>Gastrointestinal Tract - microbiology</topic><topic>Indexing in process</topic><topic>Insects</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Symbiosis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Xiaoping</creatorcontrib><creatorcontrib>Nan, Xiaoning</creatorcontrib><creatorcontrib>Wei, Cong</creatorcontrib><creatorcontrib>He, Hong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest research library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Current microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Xiaoping</au><au>Nan, Xiaoning</au><au>Wei, Cong</au><au>He, Hong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The Gut Bacteria Associated with Camponotus japonicus Mayr with Culture-Dependent and DGGE Methods</atitle><jtitle>Current microbiology</jtitle><stitle>Curr Microbiol</stitle><addtitle>Curr Microbiol</addtitle><date>2012-11-01</date><risdate>2012</risdate><volume>65</volume><issue>5</issue><spage>610</spage><epage>616</epage><pages>610-616</pages><issn>0343-8651</issn><eissn>1432-0991</eissn><abstract>The bacterial composition and distribution in the different gut regions of
Camponotus japonicus
were investigated using both culture-dependent method and culture-independent method of polymerase chain reaction and denaturing gradient gel electrophoresis (PCR–DGGE). Five different bacterial strains were isolated using culture-dependent method, and they all belong to the phylum Firmicutes, including three genera of bacteria
Bacillus,
Paenibacillus,
and
Enterococcus
.
Bacillus cereus
and
Enterococcus mundtii
were found in the midgut;
Paenibacillus
sp. was isolated from the hindgut; and the other two
Bacillus
spp. were isolated from the crop. Twelve distinct DGGE bands were found using PCR–DGGE method, and their sequences blasting analysis shows that they are members of the Proteobacteria and the Firmicutes, respectively, including three genera (
Pseudomonas
,
Candidatus
Blochmannia,
Fructobacillus
) and one uncultured bacterium, in which
Pseudomonas
was the most dominant bacteria group in all the three gut regions. According to the DGGE profile, the three gut regions had very similar gut communities, and all the DGGE bands were presented in the midgut and hindgut, while just two bands representing
Blochmannia
were not present in the crop. The results of our study indicate that the gut of
C. japonicus
harbors several other bacteria besides the obligate endosymbionts
Blochmannia,
and more work should be carried on to verify if they are common in the guts of other
Camponotus
ants.</abstract><cop>New York</cop><pub>Springer-Verlag</pub><pmid>22878556</pmid><doi>10.1007/s00284-012-0197-1</doi><tpages>7</tpages></addata></record> |
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subjects | Animals Ants - microbiology Bacteria Bacteria - classification Bacteria - genetics Bacteria - growth & development Bacteria - isolation & purification Biomedical and Life Sciences Biotechnology Culture Media - metabolism Denaturing Gradient Gel Electrophoresis Digestive system Gastrointestinal Tract - microbiology Indexing in process Insects Life Sciences Microbiology Molecular Sequence Data Phylogeny Polymerase chain reaction Symbiosis |
title | The Gut Bacteria Associated with Camponotus japonicus Mayr with Culture-Dependent and DGGE Methods |
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