Purification and characterization of a novel histone H2A specific protease (H2Asp) from chicken liver nuclear extract

• Published in: Gene 2013-01, Vol.512 (1), p.47-54
• Main Authors: Panda, Pragnya, Chaturvedi, Madan M., Panda, Amulya K., Suar, Mrutyunjay, Purohit, Jogeswar Satchidananda
• Format: Article
• Language: English
• Subjects: Animals; aspartic acid; brain; Cell Nucleus - enzymology; Chickens; Chromatin; Endopeptidases - isolation & purification; Endopeptidases - metabolism; erythrocytes; H2Asp; Histone H2A proteolysis; Histone H2A-specific protease; histones; Histones - metabolism; Irreversible modification of histone H2A; liver; Liver - enzymology; Liver Extracts - chemistry; mammals; muscles; Pisces; polyacrylamide gel electrophoresis; proteinases; proteolysis; Substrate Specificity
• ISSN: 0378-1119; 1879-0038
• DOI: 10.1016/j.gene.2012.09.098

The proteolysis of the N- or the C-terminal tails of histones have recently emerged as a novel form of irreversible posttranslational modifications of histones. However, there are very few reports describing purification of a histone specific protease. Here, we report a histone H2A specific protease (H2Asp) activity in the chicken liver nuclear extract. The H2Asp was purified to homogeneity and was found to be a ~10.5kDa protein. It demonstrated high specificity to histone H2A and was an aspartic acid like protease as shown by protease inhibition assay. The H2Asp, in the in vitro cleavage assay generated a single clipped H2A product which comigrated along with histone H4 in the SDS-PAGE and migrated as a single band when single H2A was used as substrates. The expression of H2Asp was independent of age and was tissue specific, which was demonstrated only in the nuclear extracts of chicken liver and not from the same of other tissues like brain, muscles and erythrocytes. It was also seen that H2Asp activity also exists in other classes of vertebrates from Pisces to Mammals. This report forms the first such report describing purification of a histone H2A specific protease. ► Purification of a histone H2A specific protease (H2Asp) from chicken liver nuclei. ► The H2Asp was an aspartic acid protease which clipped the C-terminus of H2A. ► The protease activity was tissue specific and was highly specific to liver. ► It forms the first report on purification of a H2A specific protease.