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Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita
Ceruloplasmin is an acute phase protein found to be activated by the host immune system during stress conditions. The ceruloplasmin gene has been reported in several teleosts and here we characterize the gene and test its association with resistance to Aeromonas hydrophila in rohu, Labeo rohita. A c...
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Published in: | Fish & shellfish immunology 2013-05, Vol.34 (5), p.1325-1334 |
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description | Ceruloplasmin is an acute phase protein found to be activated by the host immune system during stress conditions. The ceruloplasmin gene has been reported in several teleosts and here we characterize the gene and test its association with resistance to Aeromonas hydrophila in rohu, Labeo rohita. A ceruloplasmin mRNA sequence of 3355 base pairs (bp) was derived (GenBank ID: JX010736). The coding sequence (CDS) comprised of 3276 bp that coded for 1092 amino acids. Alignment results showed the greatest similarity with zebrafish followed by channel catfish sequence, and a phylogenetic tree constructed on the basis of amino acid sequences showed that rohu shares a common clade with these two species. In the ontogeny study, the expression of ceruloplasmin was detected at 9 h post-fertilization onwards, and a strong level of expression was detected at 24 h (38-fold) and 15 days (34-fold) post-fertilization. The ceruloplasmin transcripts were evident in liver, spleen, stomach and heart. Expression was undetectable in gill, brain, eye, skin, muscle, intestine, anterior and posterior kidney tissues. Expression of ceruloplasmin after A. hydrophila infection was up-regulated 6 h post-challenge and was modulated until 15 days post-challenge. The level of ceruloplasmin was also compared in rohu selectively bred for higher growth and disease resistance. The gene showed a 4.58-fold higher level of expression in resistant line over susceptible line rohu selected based on family challenge test survival to A. hydrophila. Serum ceruloplasmin levels in three year classes of rohu selected for higher growth showed a positive correlation (0.49 ± 1.11) with survival against challenge with A. hydrophila. The estimated heritability was also found to be quite high (0.50 ± 0.22) for this parameter. Thus, ceruloplasmin could be one of the useful marker traits for selection against A. hydrophila resistance in fish.
► Labeo rohita ceruloplasmin gene was sequenced and characterized. ► The ontogeny and tissue-specificity of this gene was looked into. ► Its regulation during Aeromonas hydrophila infection was studied in rohu. ► It was proved to be an indirect marker for selection to A. hydrophila resistance. |
doi_str_mv | 10.1016/j.fsi.2013.02.020 |
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► Labeo rohita ceruloplasmin gene was sequenced and characterized. ► The ontogeny and tissue-specificity of this gene was looked into. ► Its regulation during Aeromonas hydrophila infection was studied in rohu. ► It was proved to be an indirect marker for selection to A. hydrophila resistance.</description><identifier>ISSN: 1050-4648</identifier><identifier>EISSN: 1095-9947</identifier><identifier>DOI: 10.1016/j.fsi.2013.02.020</identifier><identifier>PMID: 23481214</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Aeromonas hydrophila ; Aeromonas hydrophila - physiology ; Amino Acid Sequence ; Animals ; Ceruloplasmin ; Ceruloplasmin - chemistry ; Ceruloplasmin - genetics ; Ceruloplasmin - immunology ; Ceruloplasmin - metabolism ; Cloning, Molecular ; Cyprinidae ; Disease Resistance ; DNA, Complementary - analysis ; Fish Diseases - immunology ; Fish Proteins - chemistry ; Fish Proteins - genetics ; Fish Proteins - immunology ; Fish Proteins - metabolism ; Gene Expression Profiling - veterinary ; Gene Expression Regulation ; Genetic Markers ; Gram-Negative Bacterial Infections - immunology ; Gram-Negative Bacterial Infections - veterinary ; Immune marker ; Labeo rohita ; Molecular Sequence Data ; Open Reading Frames ; Organ Specificity ; Phylogeny ; Real-Time Polymerase Chain Reaction - veterinary ; RNA, Messenger - analysis ; Selective breeding ; Sequence Alignment - veterinary ; Sequence Analysis, DNA - veterinary</subject><ispartof>Fish & shellfish immunology, 2013-05, Vol.34 (5), p.1325-1334</ispartof><rights>2013 Elsevier Ltd</rights><rights>Copyright © 2013 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-ebd5c3c68c0b27ccb357b8bfd0b14fb9ad089bfc7f78db6a2345a94f3ccd8b13</citedby><cites>FETCH-LOGICAL-c353t-ebd5c3c68c0b27ccb357b8bfd0b14fb9ad089bfc7f78db6a2345a94f3ccd8b13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23481214$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sahoo, P.K.</creatorcontrib><creatorcontrib>Das, Sweta</creatorcontrib><creatorcontrib>Mahapatra, Kanta Das</creatorcontrib><creatorcontrib>Saha, Jatindra Nath</creatorcontrib><creatorcontrib>Baranski, Matthew</creatorcontrib><creatorcontrib>Ødegård, Jørgen</creatorcontrib><creatorcontrib>Robinson, Nicholas</creatorcontrib><title>Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita</title><title>Fish & shellfish immunology</title><addtitle>Fish Shellfish Immunol</addtitle><description>Ceruloplasmin is an acute phase protein found to be activated by the host immune system during stress conditions. The ceruloplasmin gene has been reported in several teleosts and here we characterize the gene and test its association with resistance to Aeromonas hydrophila in rohu, Labeo rohita. A ceruloplasmin mRNA sequence of 3355 base pairs (bp) was derived (GenBank ID: JX010736). The coding sequence (CDS) comprised of 3276 bp that coded for 1092 amino acids. Alignment results showed the greatest similarity with zebrafish followed by channel catfish sequence, and a phylogenetic tree constructed on the basis of amino acid sequences showed that rohu shares a common clade with these two species. In the ontogeny study, the expression of ceruloplasmin was detected at 9 h post-fertilization onwards, and a strong level of expression was detected at 24 h (38-fold) and 15 days (34-fold) post-fertilization. The ceruloplasmin transcripts were evident in liver, spleen, stomach and heart. Expression was undetectable in gill, brain, eye, skin, muscle, intestine, anterior and posterior kidney tissues. Expression of ceruloplasmin after A. hydrophila infection was up-regulated 6 h post-challenge and was modulated until 15 days post-challenge. The level of ceruloplasmin was also compared in rohu selectively bred for higher growth and disease resistance. The gene showed a 4.58-fold higher level of expression in resistant line over susceptible line rohu selected based on family challenge test survival to A. hydrophila. Serum ceruloplasmin levels in three year classes of rohu selected for higher growth showed a positive correlation (0.49 ± 1.11) with survival against challenge with A. hydrophila. The estimated heritability was also found to be quite high (0.50 ± 0.22) for this parameter. Thus, ceruloplasmin could be one of the useful marker traits for selection against A. hydrophila resistance in fish.
► Labeo rohita ceruloplasmin gene was sequenced and characterized. ► The ontogeny and tissue-specificity of this gene was looked into. ► Its regulation during Aeromonas hydrophila infection was studied in rohu. ► It was proved to be an indirect marker for selection to A. hydrophila resistance.</description><subject>Aeromonas hydrophila</subject><subject>Aeromonas hydrophila - physiology</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Ceruloplasmin</subject><subject>Ceruloplasmin - chemistry</subject><subject>Ceruloplasmin - genetics</subject><subject>Ceruloplasmin - immunology</subject><subject>Ceruloplasmin - metabolism</subject><subject>Cloning, Molecular</subject><subject>Cyprinidae</subject><subject>Disease Resistance</subject><subject>DNA, Complementary - analysis</subject><subject>Fish Diseases - immunology</subject><subject>Fish Proteins - chemistry</subject><subject>Fish Proteins - genetics</subject><subject>Fish Proteins - immunology</subject><subject>Fish Proteins - metabolism</subject><subject>Gene Expression Profiling - veterinary</subject><subject>Gene Expression Regulation</subject><subject>Genetic Markers</subject><subject>Gram-Negative Bacterial Infections - immunology</subject><subject>Gram-Negative Bacterial Infections - veterinary</subject><subject>Immune marker</subject><subject>Labeo rohita</subject><subject>Molecular Sequence Data</subject><subject>Open Reading Frames</subject><subject>Organ Specificity</subject><subject>Phylogeny</subject><subject>Real-Time Polymerase Chain Reaction - veterinary</subject><subject>RNA, Messenger - analysis</subject><subject>Selective breeding</subject><subject>Sequence Alignment - veterinary</subject><subject>Sequence Analysis, DNA - veterinary</subject><issn>1050-4648</issn><issn>1095-9947</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kcuKFTEQhoMozjj6AG4kSxf2MZe-4mo4eIMDbmYfcqnYOaaTNkkLMw_js5rmjC6FghSVvz7460foNSUHSmj__nyw2R0YofxAWC3yBF1TMnXNNLXD073vSNP27XiFXuR8JoT0vCfP0RXj7UgZba_R7-Msk9QFknuQxcWAo8VlBqwhbT6uXubFBfwdAmAZDHYl4zUWCMVJj1P0dZzrD3bBuAS64EWmH5CwjQln8HWyQ0vEt5DiEkNVz_cmxXV2XuIE2eUig4YKqLh5e4dPUkHce1fkS_TMSp_h1eN7g-4-fbw7fmlO3z5_Pd6eGs07XhpQptNc96Mmig1aK94NalTWEEVbqyZpyDgpqwc7jEb1svrv5NRarrUZFeU36O0Fu6b4c4NcxOKyBu9lgLhlQTljAyd9x6qUXqQ6xZwTWLEmVz3fC0rEnoo4i5qK2FMRhNUidefNI35TC5h_G39jqIIPFwFUj78cJJG1g3qVy02Fie4_-D9zeaH4</recordid><startdate>20130501</startdate><enddate>20130501</enddate><creator>Sahoo, P.K.</creator><creator>Das, Sweta</creator><creator>Mahapatra, Kanta Das</creator><creator>Saha, Jatindra Nath</creator><creator>Baranski, Matthew</creator><creator>Ødegård, Jørgen</creator><creator>Robinson, Nicholas</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20130501</creationdate><title>Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita</title><author>Sahoo, P.K. ; Das, Sweta ; Mahapatra, Kanta Das ; Saha, Jatindra Nath ; Baranski, Matthew ; Ødegård, Jørgen ; Robinson, Nicholas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-ebd5c3c68c0b27ccb357b8bfd0b14fb9ad089bfc7f78db6a2345a94f3ccd8b13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Aeromonas hydrophila</topic><topic>Aeromonas hydrophila - physiology</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Ceruloplasmin</topic><topic>Ceruloplasmin - chemistry</topic><topic>Ceruloplasmin - genetics</topic><topic>Ceruloplasmin - immunology</topic><topic>Ceruloplasmin - metabolism</topic><topic>Cloning, Molecular</topic><topic>Cyprinidae</topic><topic>Disease Resistance</topic><topic>DNA, Complementary - analysis</topic><topic>Fish Diseases - immunology</topic><topic>Fish Proteins - chemistry</topic><topic>Fish Proteins - genetics</topic><topic>Fish Proteins - immunology</topic><topic>Fish Proteins - metabolism</topic><topic>Gene Expression Profiling - veterinary</topic><topic>Gene Expression Regulation</topic><topic>Genetic Markers</topic><topic>Gram-Negative Bacterial Infections - immunology</topic><topic>Gram-Negative Bacterial Infections - veterinary</topic><topic>Immune marker</topic><topic>Labeo rohita</topic><topic>Molecular Sequence Data</topic><topic>Open Reading Frames</topic><topic>Organ Specificity</topic><topic>Phylogeny</topic><topic>Real-Time Polymerase Chain Reaction - veterinary</topic><topic>RNA, Messenger - analysis</topic><topic>Selective breeding</topic><topic>Sequence Alignment - veterinary</topic><topic>Sequence Analysis, DNA - veterinary</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sahoo, P.K.</creatorcontrib><creatorcontrib>Das, Sweta</creatorcontrib><creatorcontrib>Mahapatra, Kanta Das</creatorcontrib><creatorcontrib>Saha, Jatindra Nath</creatorcontrib><creatorcontrib>Baranski, Matthew</creatorcontrib><creatorcontrib>Ødegård, Jørgen</creatorcontrib><creatorcontrib>Robinson, Nicholas</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Fish & shellfish immunology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sahoo, P.K.</au><au>Das, Sweta</au><au>Mahapatra, Kanta Das</au><au>Saha, Jatindra Nath</au><au>Baranski, Matthew</au><au>Ødegård, Jørgen</au><au>Robinson, Nicholas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita</atitle><jtitle>Fish & shellfish immunology</jtitle><addtitle>Fish Shellfish Immunol</addtitle><date>2013-05-01</date><risdate>2013</risdate><volume>34</volume><issue>5</issue><spage>1325</spage><epage>1334</epage><pages>1325-1334</pages><issn>1050-4648</issn><eissn>1095-9947</eissn><abstract>Ceruloplasmin is an acute phase protein found to be activated by the host immune system during stress conditions. The ceruloplasmin gene has been reported in several teleosts and here we characterize the gene and test its association with resistance to Aeromonas hydrophila in rohu, Labeo rohita. A ceruloplasmin mRNA sequence of 3355 base pairs (bp) was derived (GenBank ID: JX010736). The coding sequence (CDS) comprised of 3276 bp that coded for 1092 amino acids. Alignment results showed the greatest similarity with zebrafish followed by channel catfish sequence, and a phylogenetic tree constructed on the basis of amino acid sequences showed that rohu shares a common clade with these two species. In the ontogeny study, the expression of ceruloplasmin was detected at 9 h post-fertilization onwards, and a strong level of expression was detected at 24 h (38-fold) and 15 days (34-fold) post-fertilization. The ceruloplasmin transcripts were evident in liver, spleen, stomach and heart. Expression was undetectable in gill, brain, eye, skin, muscle, intestine, anterior and posterior kidney tissues. Expression of ceruloplasmin after A. hydrophila infection was up-regulated 6 h post-challenge and was modulated until 15 days post-challenge. The level of ceruloplasmin was also compared in rohu selectively bred for higher growth and disease resistance. The gene showed a 4.58-fold higher level of expression in resistant line over susceptible line rohu selected based on family challenge test survival to A. hydrophila. Serum ceruloplasmin levels in three year classes of rohu selected for higher growth showed a positive correlation (0.49 ± 1.11) with survival against challenge with A. hydrophila. The estimated heritability was also found to be quite high (0.50 ± 0.22) for this parameter. Thus, ceruloplasmin could be one of the useful marker traits for selection against A. hydrophila resistance in fish.
► Labeo rohita ceruloplasmin gene was sequenced and characterized. ► The ontogeny and tissue-specificity of this gene was looked into. ► Its regulation during Aeromonas hydrophila infection was studied in rohu. ► It was proved to be an indirect marker for selection to A. hydrophila resistance.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>23481214</pmid><doi>10.1016/j.fsi.2013.02.020</doi><tpages>10</tpages></addata></record> |
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subjects | Aeromonas hydrophila Aeromonas hydrophila - physiology Amino Acid Sequence Animals Ceruloplasmin Ceruloplasmin - chemistry Ceruloplasmin - genetics Ceruloplasmin - immunology Ceruloplasmin - metabolism Cloning, Molecular Cyprinidae Disease Resistance DNA, Complementary - analysis Fish Diseases - immunology Fish Proteins - chemistry Fish Proteins - genetics Fish Proteins - immunology Fish Proteins - metabolism Gene Expression Profiling - veterinary Gene Expression Regulation Genetic Markers Gram-Negative Bacterial Infections - immunology Gram-Negative Bacterial Infections - veterinary Immune marker Labeo rohita Molecular Sequence Data Open Reading Frames Organ Specificity Phylogeny Real-Time Polymerase Chain Reaction - veterinary RNA, Messenger - analysis Selective breeding Sequence Alignment - veterinary Sequence Analysis, DNA - veterinary |
title | Characterization of the ceruloplasmin gene and its potential role as an indirect marker for selection to Aeromonas hydrophila resistance in rohu, Labeo rohita |
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