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Identification of two paralogous caprine CD36 genes that display highly divergent mRNA expression profiles
Abstract The CD36 molecule plays a pivotal role in a variety of immunological and cellular processes, including pathogen recognition, inflammation and apoptosis. Herein, we demonstrate that this gene is duplicated in goats, with two copies ( CD36 and CD36-like ) that display highly divergent mRNA ex...
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Published in: | Comparative immunology, microbiology and infectious diseases microbiology and infectious diseases, 2013-01, Vol.36 (1), p.1-7 |
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container_title | Comparative immunology, microbiology and infectious diseases |
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creator | Zidi, A Castelló, A Jordana, J Carrizosa, J Urrutia, B Serradilla, J.M Amills, M |
description | Abstract The CD36 molecule plays a pivotal role in a variety of immunological and cellular processes, including pathogen recognition, inflammation and apoptosis. Herein, we demonstrate that this gene is duplicated in goats, with two copies ( CD36 and CD36-like ) that display highly divergent mRNA expression profiles. In this way, CD36 mRNA is mostly expressed in the adipose tissue and heart whilst CD36-like mRNA shows a high expression in the liver. We have also found evidence of the presence of two paralogous CD36 and CD36-like genes in the bovine genome, suggesting that CD36 duplication took place before goat–cattle radiation, i.e. at least 20 MYR ago. Finally, we have characterized the polymorphism of the coding regions of the goat CD36 and CD36-like genes. In doing so, we have identified one synonymous polymorphism at the CD36-like gene (c.390A>C) that displays a significant association ( P = 0.04) with milk somatic cell count, a parameter often used to diagnose mastitis in domestic ruminants. |
doi_str_mv | 10.1016/j.cimid.2012.08.003 |
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Herein, we demonstrate that this gene is duplicated in goats, with two copies ( CD36 and CD36-like ) that display highly divergent mRNA expression profiles. In this way, CD36 mRNA is mostly expressed in the adipose tissue and heart whilst CD36-like mRNA shows a high expression in the liver. We have also found evidence of the presence of two paralogous CD36 and CD36-like genes in the bovine genome, suggesting that CD36 duplication took place before goat–cattle radiation, i.e. at least 20 MYR ago. Finally, we have characterized the polymorphism of the coding regions of the goat CD36 and CD36-like genes. In doing so, we have identified one synonymous polymorphism at the CD36-like gene (c.390A>C) that displays a significant association ( P = 0.04) with milk somatic cell count, a parameter often used to diagnose mastitis in domestic ruminants.</description><identifier>ISSN: 0147-9571</identifier><identifier>EISSN: 1878-1667</identifier><identifier>DOI: 10.1016/j.cimid.2012.08.003</identifier><identifier>PMID: 22989464</identifier><identifier>CODEN: CIMIDV</identifier><language>eng</language><publisher>Kidlington: Elsevier Ltd</publisher><subject>Adipose tissue ; Alleles ; Allergy and Immunology ; Amino Acid Sequence ; Animals ; Biological and medical sciences ; CD36 Antigens - chemistry ; CD36 Antigens - genetics ; CD36 Antigens - metabolism ; CD36 gene ; Female ; Fundamental and applied biological sciences. Psychology ; Gene duplication ; Gene Expression Profiling ; Gene Frequency ; Genetic Loci ; Genome ; Genotype ; Goat ; Goats - genetics ; Goats - metabolism ; Infectious Disease ; Microbiology ; Milk - cytology ; Phylogeny ; Polymorphism, Genetic ; RNA, Messenger - metabolism ; Ruminantia</subject><ispartof>Comparative immunology, microbiology and infectious diseases, 2013-01, Vol.36 (1), p.1-7</ispartof><rights>Elsevier Ltd</rights><rights>2012 Elsevier Ltd</rights><rights>2014 INIST-CNRS</rights><rights>Copyright © 2012 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c477t-cbc5e6eef0b95d5670b7f89f0537be3e944a9e0869636c3f592b8fd9182b758c3</citedby><cites>FETCH-LOGICAL-c477t-cbc5e6eef0b95d5670b7f89f0537be3e944a9e0869636c3f592b8fd9182b758c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26763205$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22989464$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zidi, A</creatorcontrib><creatorcontrib>Castelló, A</creatorcontrib><creatorcontrib>Jordana, J</creatorcontrib><creatorcontrib>Carrizosa, J</creatorcontrib><creatorcontrib>Urrutia, B</creatorcontrib><creatorcontrib>Serradilla, J.M</creatorcontrib><creatorcontrib>Amills, M</creatorcontrib><title>Identification of two paralogous caprine CD36 genes that display highly divergent mRNA expression profiles</title><title>Comparative immunology, microbiology and infectious diseases</title><addtitle>Comp Immunol Microbiol Infect Dis</addtitle><description>Abstract The CD36 molecule plays a pivotal role in a variety of immunological and cellular processes, including pathogen recognition, inflammation and apoptosis. Herein, we demonstrate that this gene is duplicated in goats, with two copies ( CD36 and CD36-like ) that display highly divergent mRNA expression profiles. In this way, CD36 mRNA is mostly expressed in the adipose tissue and heart whilst CD36-like mRNA shows a high expression in the liver. We have also found evidence of the presence of two paralogous CD36 and CD36-like genes in the bovine genome, suggesting that CD36 duplication took place before goat–cattle radiation, i.e. at least 20 MYR ago. Finally, we have characterized the polymorphism of the coding regions of the goat CD36 and CD36-like genes. In doing so, we have identified one synonymous polymorphism at the CD36-like gene (c.390A>C) that displays a significant association ( P = 0.04) with milk somatic cell count, a parameter often used to diagnose mastitis in domestic ruminants.</description><subject>Adipose tissue</subject><subject>Alleles</subject><subject>Allergy and Immunology</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>CD36 Antigens - chemistry</subject><subject>CD36 Antigens - genetics</subject><subject>CD36 Antigens - metabolism</subject><subject>CD36 gene</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene duplication</subject><subject>Gene Expression Profiling</subject><subject>Gene Frequency</subject><subject>Genetic Loci</subject><subject>Genome</subject><subject>Genotype</subject><subject>Goat</subject><subject>Goats - genetics</subject><subject>Goats - metabolism</subject><subject>Infectious Disease</subject><subject>Microbiology</subject><subject>Milk - cytology</subject><subject>Phylogeny</subject><subject>Polymorphism, Genetic</subject><subject>RNA, Messenger - metabolism</subject><subject>Ruminantia</subject><issn>0147-9571</issn><issn>1878-1667</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNqFkkuLFDEUhYMoTs_oLxAkG8FNlXlU5bFQGNpRBwYFH-uQSt10p6xHT1I92v_elN0quJlVCPnOvTf3HISeUVJSQsWrrnRhCG3JCGUlUSUh_AFaUSVVQYWQD9GK0EoWupb0DJ2n1BFCNK3oY3TGmFa6EtUKddctjHPwwdk5TCOePJ5_THhno-2nzbRP2NldDCPg9Vsu8AZGSHje2hm3Ie16e8DbsNn2h3y9g5ifZzx8_niJ4ecuQkpLyV2cfOghPUGPvO0TPD2dF-jbu6uv6w_Fzaf31-vLm8JVUs6Fa1wNAsCTRtdtLSRppFfak5rLBjjoqrIaiBJacOG4rzVrlG81VayRtXL8Ar081s2Nb_eQZjOE5KDv7Qj5Q4ZyxhVVRNT3o0xyRiXlVUb5EXVxSimCN3ktg40HQ4lZ_DCd-e2HWfwwRJnsR1Y9PzXYNwO0fzV_DMjAixNgk7O9j3Z0If3jhBSckWXS10cO8ubuAkSTXIDRQRsiuNm0U7hnkDf_6V0fxux6_x0OkLppH8dsiqEmZY35skRnSQ5lS2q05r8AAnC-1A</recordid><startdate>20130101</startdate><enddate>20130101</enddate><creator>Zidi, A</creator><creator>Castelló, A</creator><creator>Jordana, J</creator><creator>Carrizosa, J</creator><creator>Urrutia, B</creator><creator>Serradilla, J.M</creator><creator>Amills, M</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TM</scope></search><sort><creationdate>20130101</creationdate><title>Identification of two paralogous caprine CD36 genes that display highly divergent mRNA expression profiles</title><author>Zidi, A ; Castelló, A ; Jordana, J ; Carrizosa, J ; Urrutia, B ; Serradilla, J.M ; Amills, M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c477t-cbc5e6eef0b95d5670b7f89f0537be3e944a9e0869636c3f592b8fd9182b758c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Adipose tissue</topic><topic>Alleles</topic><topic>Allergy and Immunology</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>CD36 Antigens - chemistry</topic><topic>CD36 Antigens - genetics</topic><topic>CD36 Antigens - metabolism</topic><topic>CD36 gene</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene duplication</topic><topic>Gene Expression Profiling</topic><topic>Gene Frequency</topic><topic>Genetic Loci</topic><topic>Genome</topic><topic>Genotype</topic><topic>Goat</topic><topic>Goats - genetics</topic><topic>Goats - metabolism</topic><topic>Infectious Disease</topic><topic>Microbiology</topic><topic>Milk - cytology</topic><topic>Phylogeny</topic><topic>Polymorphism, Genetic</topic><topic>RNA, Messenger - metabolism</topic><topic>Ruminantia</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zidi, A</creatorcontrib><creatorcontrib>Castelló, A</creatorcontrib><creatorcontrib>Jordana, J</creatorcontrib><creatorcontrib>Carrizosa, J</creatorcontrib><creatorcontrib>Urrutia, B</creatorcontrib><creatorcontrib>Serradilla, J.M</creatorcontrib><creatorcontrib>Amills, M</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><jtitle>Comparative immunology, microbiology and infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zidi, A</au><au>Castelló, A</au><au>Jordana, J</au><au>Carrizosa, J</au><au>Urrutia, B</au><au>Serradilla, J.M</au><au>Amills, M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of two paralogous caprine CD36 genes that display highly divergent mRNA expression profiles</atitle><jtitle>Comparative immunology, microbiology and infectious diseases</jtitle><addtitle>Comp Immunol Microbiol Infect Dis</addtitle><date>2013-01-01</date><risdate>2013</risdate><volume>36</volume><issue>1</issue><spage>1</spage><epage>7</epage><pages>1-7</pages><issn>0147-9571</issn><eissn>1878-1667</eissn><coden>CIMIDV</coden><abstract>Abstract The CD36 molecule plays a pivotal role in a variety of immunological and cellular processes, including pathogen recognition, inflammation and apoptosis. Herein, we demonstrate that this gene is duplicated in goats, with two copies ( CD36 and CD36-like ) that display highly divergent mRNA expression profiles. In this way, CD36 mRNA is mostly expressed in the adipose tissue and heart whilst CD36-like mRNA shows a high expression in the liver. We have also found evidence of the presence of two paralogous CD36 and CD36-like genes in the bovine genome, suggesting that CD36 duplication took place before goat–cattle radiation, i.e. at least 20 MYR ago. Finally, we have characterized the polymorphism of the coding regions of the goat CD36 and CD36-like genes. 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subjects | Adipose tissue Alleles Allergy and Immunology Amino Acid Sequence Animals Biological and medical sciences CD36 Antigens - chemistry CD36 Antigens - genetics CD36 Antigens - metabolism CD36 gene Female Fundamental and applied biological sciences. Psychology Gene duplication Gene Expression Profiling Gene Frequency Genetic Loci Genome Genotype Goat Goats - genetics Goats - metabolism Infectious Disease Microbiology Milk - cytology Phylogeny Polymorphism, Genetic RNA, Messenger - metabolism Ruminantia |
title | Identification of two paralogous caprine CD36 genes that display highly divergent mRNA expression profiles |
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