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Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization
Meso -secondary alcohol dehydrogenases ( meso -SADH) from Klebsiella oxytoca KCTC1686 and Klebsiella pneumoniae KCTC2242 were codon optimized and expressed in Escherichia coli W3110. The published gene data of K. pneumoniae NTUH-K2044 (NCBI accession number AP006725), K. pneumoniae 342 (NCBI accessi...
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Published in: | Bioprocess and biosystems engineering 2013-07, Vol.36 (7), p.1005-1010 |
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description | Meso
-secondary alcohol dehydrogenases (
meso
-SADH) from
Klebsiella oxytoca
KCTC1686 and
Klebsiella pneumoniae
KCTC2242 were codon optimized and expressed in
Escherichia coli
W3110. The published gene data of
K. pneumoniae
NTUH-K2044 (NCBI accession number AP006725),
K. pneumoniae
342 (NCBI accession number CP000964), and
K. pneumoniae
MGH 78578 (NCBI accession number CP000647), were compared with the
meso
-SADH sequences of each strain, respectively. Codon-optimized
meso
-SADH enzymes of
K. oxytoca
and
K. pneumoniae
showed approximately twofold to fivefold increased enzyme activities for acetoin reduction over native enzymes. The highest activities for each strain were obtained at 30–37 °C and pH 6–7 (yielding 203.1 U/mg of protein and 156.5 U/mg of protein, respectively). The increased enzyme activity of the codon-optimized enzymes indicated that these modified enzymes could convert acetoin into 2,3-butanediol with a high yield. |
doi_str_mv | 10.1007/s00449-012-0824-z |
format | article |
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-secondary alcohol dehydrogenases (
meso
-SADH) from
Klebsiella oxytoca
KCTC1686 and
Klebsiella pneumoniae
KCTC2242 were codon optimized and expressed in
Escherichia coli
W3110. The published gene data of
K. pneumoniae
NTUH-K2044 (NCBI accession number AP006725),
K. pneumoniae
342 (NCBI accession number CP000964), and
K. pneumoniae
MGH 78578 (NCBI accession number CP000647), were compared with the
meso
-SADH sequences of each strain, respectively. Codon-optimized
meso
-SADH enzymes of
K. oxytoca
and
K. pneumoniae
showed approximately twofold to fivefold increased enzyme activities for acetoin reduction over native enzymes. The highest activities for each strain were obtained at 30–37 °C and pH 6–7 (yielding 203.1 U/mg of protein and 156.5 U/mg of protein, respectively). The increased enzyme activity of the codon-optimized enzymes indicated that these modified enzymes could convert acetoin into 2,3-butanediol with a high yield.</description><identifier>ISSN: 1615-7591</identifier><identifier>EISSN: 1615-7605</identifier><identifier>DOI: 10.1007/s00449-012-0824-z</identifier><identifier>PMID: 23053416</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Alcohol Dehydrogenase - chemistry ; Alcohol Dehydrogenase - genetics ; Alcohol Dehydrogenase - metabolism ; Bacteria ; Base Sequence ; Bioengineering ; Biotechnology ; Chemistry ; Chemistry and Materials Science ; Codon ; DNA Primers ; E coli ; Electrophoresis, Polyacrylamide Gel ; Environmental Engineering/Biotechnology ; Enzymatic activity ; Enzymes ; Food Science ; Gene expression ; Industrial and Production Engineering ; Industrial Chemistry/Chemical Engineering ; Klebsiella - enzymology ; Molecular Sequence Data ; Plasmids ; Sequence Homology, Nucleic Acid ; Short Communication</subject><ispartof>Bioprocess and biosystems engineering, 2013-07, Vol.36 (7), p.1005-1010</ispartof><rights>Springer-Verlag 2012</rights><rights>Springer-Verlag Berlin Heidelberg 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-8bf6a1e9e4e98a4d0cc59b3c7808ebc3463458aa27947e48a3e5de25862b45993</citedby><cites>FETCH-LOGICAL-c409t-8bf6a1e9e4e98a4d0cc59b3c7808ebc3463458aa27947e48a3e5de25862b45993</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23053416$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Soojin</creatorcontrib><creatorcontrib>Kim, Borim</creatorcontrib><creatorcontrib>Oh, Minkyu</creatorcontrib><creatorcontrib>Kim, Youngrok</creatorcontrib><creatorcontrib>Lee, Jinwon</creatorcontrib><title>Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization</title><title>Bioprocess and biosystems engineering</title><addtitle>Bioprocess Biosyst Eng</addtitle><addtitle>Bioprocess Biosyst Eng</addtitle><description>Meso
-secondary alcohol dehydrogenases (
meso
-SADH) from
Klebsiella oxytoca
KCTC1686 and
Klebsiella pneumoniae
KCTC2242 were codon optimized and expressed in
Escherichia coli
W3110. The published gene data of
K. pneumoniae
NTUH-K2044 (NCBI accession number AP006725),
K. pneumoniae
342 (NCBI accession number CP000964), and
K. pneumoniae
MGH 78578 (NCBI accession number CP000647), were compared with the
meso
-SADH sequences of each strain, respectively. Codon-optimized
meso
-SADH enzymes of
K. oxytoca
and
K. pneumoniae
showed approximately twofold to fivefold increased enzyme activities for acetoin reduction over native enzymes. The highest activities for each strain were obtained at 30–37 °C and pH 6–7 (yielding 203.1 U/mg of protein and 156.5 U/mg of protein, respectively). The increased enzyme activity of the codon-optimized enzymes indicated that these modified enzymes could convert acetoin into 2,3-butanediol with a high yield.</description><subject>Alcohol Dehydrogenase - chemistry</subject><subject>Alcohol Dehydrogenase - genetics</subject><subject>Alcohol Dehydrogenase - metabolism</subject><subject>Bacteria</subject><subject>Base Sequence</subject><subject>Bioengineering</subject><subject>Biotechnology</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Codon</subject><subject>DNA Primers</subject><subject>E coli</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Environmental Engineering/Biotechnology</subject><subject>Enzymatic activity</subject><subject>Enzymes</subject><subject>Food Science</subject><subject>Gene expression</subject><subject>Industrial and Production Engineering</subject><subject>Industrial Chemistry/Chemical Engineering</subject><subject>Klebsiella - enzymology</subject><subject>Molecular Sequence Data</subject><subject>Plasmids</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Short Communication</subject><issn>1615-7591</issn><issn>1615-7605</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp1kU9r3DAQxUVIaNKkHyCXIuilFzejf7Z0LCFpQwK9JGchy-NdLba0lbyF3U8fL7sppZDTDMxv3jzmEXLN4BsDaG4KgJSmAsYr0FxWuxNywWqmqqYGdfrWK8POycdSVgBMaQ4fyDkXoIRk9QVZ3MWlix476vwU_oRpS1NPRyypKuhT7FzeUjf4tEwD7XC57XJaYHQFaZ_TSB8HbEvAYXC0rNEHLLTdUp-6FGlaT2EMOzeFFK_IWe-Ggp-O9ZK83N893_6snn79eLj9_lR5CWaqdNvXjqFBiUY72YH3yrTCNxo0tl7IWkilneONkQ1K7QSqDrnSNW-lMkZckq8H3XVOvzdYJjuG4vf-IqZNsUzUhgteczGjX_5DV2mT4-xuT2llJAM-U-xA-ZxKydjbdQ7j_BXLwO5TsIcU7JyC3adgd_PO56Pyph2x-7vx9vYZ4AegzKO4wPzP6XdVXwFvo5OZ</recordid><startdate>20130701</startdate><enddate>20130701</enddate><creator>Lee, Soojin</creator><creator>Kim, Borim</creator><creator>Oh, Minkyu</creator><creator>Kim, Youngrok</creator><creator>Lee, Jinwon</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20130701</creationdate><title>Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization</title><author>Lee, Soojin ; Kim, Borim ; Oh, Minkyu ; Kim, Youngrok ; Lee, Jinwon</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c409t-8bf6a1e9e4e98a4d0cc59b3c7808ebc3463458aa27947e48a3e5de25862b45993</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Alcohol Dehydrogenase - chemistry</topic><topic>Alcohol Dehydrogenase - genetics</topic><topic>Alcohol Dehydrogenase - metabolism</topic><topic>Bacteria</topic><topic>Base Sequence</topic><topic>Bioengineering</topic><topic>Biotechnology</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Codon</topic><topic>DNA Primers</topic><topic>E coli</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Environmental Engineering/Biotechnology</topic><topic>Enzymatic activity</topic><topic>Enzymes</topic><topic>Food Science</topic><topic>Gene expression</topic><topic>Industrial and Production Engineering</topic><topic>Industrial Chemistry/Chemical Engineering</topic><topic>Klebsiella - enzymology</topic><topic>Molecular Sequence Data</topic><topic>Plasmids</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Short Communication</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Soojin</creatorcontrib><creatorcontrib>Kim, Borim</creatorcontrib><creatorcontrib>Oh, Minkyu</creatorcontrib><creatorcontrib>Kim, Youngrok</creatorcontrib><creatorcontrib>Lee, Jinwon</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Science Journals</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Bioprocess and biosystems engineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Soojin</au><au>Kim, Borim</au><au>Oh, Minkyu</au><au>Kim, Youngrok</au><au>Lee, Jinwon</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization</atitle><jtitle>Bioprocess and biosystems engineering</jtitle><stitle>Bioprocess Biosyst Eng</stitle><addtitle>Bioprocess Biosyst Eng</addtitle><date>2013-07-01</date><risdate>2013</risdate><volume>36</volume><issue>7</issue><spage>1005</spage><epage>1010</epage><pages>1005-1010</pages><issn>1615-7591</issn><eissn>1615-7605</eissn><abstract>Meso
-secondary alcohol dehydrogenases (
meso
-SADH) from
Klebsiella oxytoca
KCTC1686 and
Klebsiella pneumoniae
KCTC2242 were codon optimized and expressed in
Escherichia coli
W3110. The published gene data of
K. pneumoniae
NTUH-K2044 (NCBI accession number AP006725),
K. pneumoniae
342 (NCBI accession number CP000964), and
K. pneumoniae
MGH 78578 (NCBI accession number CP000647), were compared with the
meso
-SADH sequences of each strain, respectively. Codon-optimized
meso
-SADH enzymes of
K. oxytoca
and
K. pneumoniae
showed approximately twofold to fivefold increased enzyme activities for acetoin reduction over native enzymes. The highest activities for each strain were obtained at 30–37 °C and pH 6–7 (yielding 203.1 U/mg of protein and 156.5 U/mg of protein, respectively). The increased enzyme activity of the codon-optimized enzymes indicated that these modified enzymes could convert acetoin into 2,3-butanediol with a high yield.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>23053416</pmid><doi>10.1007/s00449-012-0824-z</doi><tpages>6</tpages></addata></record> |
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source | Springer Nature |
subjects | Alcohol Dehydrogenase - chemistry Alcohol Dehydrogenase - genetics Alcohol Dehydrogenase - metabolism Bacteria Base Sequence Bioengineering Biotechnology Chemistry Chemistry and Materials Science Codon DNA Primers E coli Electrophoresis, Polyacrylamide Gel Environmental Engineering/Biotechnology Enzymatic activity Enzymes Food Science Gene expression Industrial and Production Engineering Industrial Chemistry/Chemical Engineering Klebsiella - enzymology Molecular Sequence Data Plasmids Sequence Homology, Nucleic Acid Short Communication |
title | Enhanced activity of meso-secondary alcohol dehydrogenase from Klebsiella species by codon optimization |
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