Loading…

Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5

Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an...

Full description

Saved in:
Bibliographic Details
Published in:Archives of microbiology 2013-06, Vol.195 (6), p.431-438
Main Authors: Urzúa, Lucia Soto, Vázquez-Candanedo, Ada P., Sánchez-Espíndola, Adriana, Ramírez, Carlos Ávila, Baca, Beatriz E.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3
cites cdi_FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3
container_end_page 438
container_issue 6
container_start_page 431
container_title Archives of microbiology
container_volume 195
creator Urzúa, Lucia Soto
Vázquez-Candanedo, Ada P.
Sánchez-Espíndola, Adriana
Ramírez, Carlos Ávila
Baca, Beatriz E.
description Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the feu operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of G. diazotrophicus under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km R -mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km R -mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of G. diazotrophicus .
doi_str_mv 10.1007/s00203-013-0890-x
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1399909503</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1357497687</sourcerecordid><originalsourceid>FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</originalsourceid><addsrcrecordid>eNqNkc1O3DAUha2qCKbTPgAbZKkbNinXP0ns5TCiFGkkWLBgZzmOwxhl7GAnEvD09TRQVUiVWNi-uv7OtY8OQscEfhCA-iwBUGAFkLyEhOLpE1oQzmgBNb37jBbAgBZCMnaEvqT0AECoEOIQHVFWUV5TukDhqrV-dJ0zenTBY-1bbLY6ajPa6F7mZuhyH7uYy9X5Go9R-zSEmAkcBrtvO48v-8kEr40dQ_NHjVunX8IYw7B1Zkr4Rve4_IoOOt0n--31XKLbnxe361_F5vryar3aFIZDORZUA6fZV0uaioHgHc27IQ1UwKrSsI4RU_OmtSXjhtESpBFC0roinYZWsyU6nccOMTxONo1q55Kxfa-9DVNShEkpQZbAPoCWNZd1JeqMfn-HPoQp-uxjT1USeP5CpshMmRhSirZTQ3Q7HZ8VAbXPTc25qexP7XNTT1lz8jp5ana2_at4CyoDdAZSvvL3Nv7z9H-n_gY2TaJq</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1356904927</pqid></control><display><type>article</type><title>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</title><source>Springer Nature</source><creator>Urzúa, Lucia Soto ; Vázquez-Candanedo, Ada P. ; Sánchez-Espíndola, Adriana ; Ramírez, Carlos Ávila ; Baca, Beatriz E.</creator><creatorcontrib>Urzúa, Lucia Soto ; Vázquez-Candanedo, Ada P. ; Sánchez-Espíndola, Adriana ; Ramírez, Carlos Ávila ; Baca, Beatriz E.</creatorcontrib><description>Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the feu operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of G. diazotrophicus under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km R -mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km R -mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of G. diazotrophicus .</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-013-0890-x</identifier><identifier>PMID: 23624722</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>ABC transporters ; Adenosine Triphosphatases - genetics ; Amino acids ; ATP-Binding Cassette Transporters - genetics ; Bacterial Proteins - genetics ; Biochemistry ; Biological Transport ; Biomedical and Life Sciences ; Biotechnology ; Cell Biology ; Cloning ; Ecology ; Gluconacetobacter - genetics ; Gluconacetobacter - metabolism ; Gluconacetobacter diazotrophicus ; Iron ; Iron - metabolism ; Life Sciences ; Membrane Transport Proteins - genetics ; Microbial Ecology ; Microbiology ; Microorganisms ; Nitrates ; Nitrogen ; Nitrogen Fixation ; Nutrient deficiency ; Operon ; Original Paper ; Periplasmic Binding Proteins - genetics ; Plasmids ; Saccharum - microbiology ; Sucrose ; Sugarcane</subject><ispartof>Archives of microbiology, 2013-06, Vol.195 (6), p.431-438</ispartof><rights>Springer-Verlag Berlin Heidelberg 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</citedby><cites>FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23624722$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Urzúa, Lucia Soto</creatorcontrib><creatorcontrib>Vázquez-Candanedo, Ada P.</creatorcontrib><creatorcontrib>Sánchez-Espíndola, Adriana</creatorcontrib><creatorcontrib>Ramírez, Carlos Ávila</creatorcontrib><creatorcontrib>Baca, Beatriz E.</creatorcontrib><title>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the feu operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of G. diazotrophicus under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km R -mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km R -mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of G. diazotrophicus .</description><subject>ABC transporters</subject><subject>Adenosine Triphosphatases - genetics</subject><subject>Amino acids</subject><subject>ATP-Binding Cassette Transporters - genetics</subject><subject>Bacterial Proteins - genetics</subject><subject>Biochemistry</subject><subject>Biological Transport</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Cloning</subject><subject>Ecology</subject><subject>Gluconacetobacter - genetics</subject><subject>Gluconacetobacter - metabolism</subject><subject>Gluconacetobacter diazotrophicus</subject><subject>Iron</subject><subject>Iron - metabolism</subject><subject>Life Sciences</subject><subject>Membrane Transport Proteins - genetics</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Nitrates</subject><subject>Nitrogen</subject><subject>Nitrogen Fixation</subject><subject>Nutrient deficiency</subject><subject>Operon</subject><subject>Original Paper</subject><subject>Periplasmic Binding Proteins - genetics</subject><subject>Plasmids</subject><subject>Saccharum - microbiology</subject><subject>Sucrose</subject><subject>Sugarcane</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNqNkc1O3DAUha2qCKbTPgAbZKkbNinXP0ns5TCiFGkkWLBgZzmOwxhl7GAnEvD09TRQVUiVWNi-uv7OtY8OQscEfhCA-iwBUGAFkLyEhOLpE1oQzmgBNb37jBbAgBZCMnaEvqT0AECoEOIQHVFWUV5TukDhqrV-dJ0zenTBY-1bbLY6ajPa6F7mZuhyH7uYy9X5Go9R-zSEmAkcBrtvO48v-8kEr40dQ_NHjVunX8IYw7B1Zkr4Rve4_IoOOt0n--31XKLbnxe361_F5vryar3aFIZDORZUA6fZV0uaioHgHc27IQ1UwKrSsI4RU_OmtSXjhtESpBFC0roinYZWsyU6nccOMTxONo1q55Kxfa-9DVNShEkpQZbAPoCWNZd1JeqMfn-HPoQp-uxjT1USeP5CpshMmRhSirZTQ3Q7HZ8VAbXPTc25qexP7XNTT1lz8jp5ana2_at4CyoDdAZSvvL3Nv7z9H-n_gY2TaJq</recordid><startdate>20130601</startdate><enddate>20130601</enddate><creator>Urzúa, Lucia Soto</creator><creator>Vázquez-Candanedo, Ada P.</creator><creator>Sánchez-Espíndola, Adriana</creator><creator>Ramírez, Carlos Ávila</creator><creator>Baca, Beatriz E.</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20130601</creationdate><title>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</title><author>Urzúa, Lucia Soto ; Vázquez-Candanedo, Ada P. ; Sánchez-Espíndola, Adriana ; Ramírez, Carlos Ávila ; Baca, Beatriz E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>ABC transporters</topic><topic>Adenosine Triphosphatases - genetics</topic><topic>Amino acids</topic><topic>ATP-Binding Cassette Transporters - genetics</topic><topic>Bacterial Proteins - genetics</topic><topic>Biochemistry</topic><topic>Biological Transport</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Cloning</topic><topic>Ecology</topic><topic>Gluconacetobacter - genetics</topic><topic>Gluconacetobacter - metabolism</topic><topic>Gluconacetobacter diazotrophicus</topic><topic>Iron</topic><topic>Iron - metabolism</topic><topic>Life Sciences</topic><topic>Membrane Transport Proteins - genetics</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Nitrates</topic><topic>Nitrogen</topic><topic>Nitrogen Fixation</topic><topic>Nutrient deficiency</topic><topic>Operon</topic><topic>Original Paper</topic><topic>Periplasmic Binding Proteins - genetics</topic><topic>Plasmids</topic><topic>Saccharum - microbiology</topic><topic>Sucrose</topic><topic>Sugarcane</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Urzúa, Lucia Soto</creatorcontrib><creatorcontrib>Vázquez-Candanedo, Ada P.</creatorcontrib><creatorcontrib>Sánchez-Espíndola, Adriana</creatorcontrib><creatorcontrib>Ramírez, Carlos Ávila</creatorcontrib><creatorcontrib>Baca, Beatriz E.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>ProQuest Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Urzúa, Lucia Soto</au><au>Vázquez-Candanedo, Ada P.</au><au>Sánchez-Espíndola, Adriana</au><au>Ramírez, Carlos Ávila</au><au>Baca, Beatriz E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2013-06-01</date><risdate>2013</risdate><volume>195</volume><issue>6</issue><spage>431</spage><epage>438</epage><pages>431-438</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the feu operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of G. diazotrophicus under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km R -mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km R -mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of G. diazotrophicus .</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>23624722</pmid><doi>10.1007/s00203-013-0890-x</doi><tpages>8</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0302-8933
ispartof Archives of microbiology, 2013-06, Vol.195 (6), p.431-438
issn 0302-8933
1432-072X
language eng
recordid cdi_proquest_miscellaneous_1399909503
source Springer Nature
subjects ABC transporters
Adenosine Triphosphatases - genetics
Amino acids
ATP-Binding Cassette Transporters - genetics
Bacterial Proteins - genetics
Biochemistry
Biological Transport
Biomedical and Life Sciences
Biotechnology
Cell Biology
Cloning
Ecology
Gluconacetobacter - genetics
Gluconacetobacter - metabolism
Gluconacetobacter diazotrophicus
Iron
Iron - metabolism
Life Sciences
Membrane Transport Proteins - genetics
Microbial Ecology
Microbiology
Microorganisms
Nitrates
Nitrogen
Nitrogen Fixation
Nutrient deficiency
Operon
Original Paper
Periplasmic Binding Proteins - genetics
Plasmids
Saccharum - microbiology
Sucrose
Sugarcane
title Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-14T01%3A42%3A08IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Identification%20and%20characterization%20of%20an%20iron%20ABC%20transporter%20operon%20in%20Gluconacetobacter%20diazotrophicus%20Pal%205&rft.jtitle=Archives%20of%20microbiology&rft.au=Urz%C3%BAa,%20Lucia%20Soto&rft.date=2013-06-01&rft.volume=195&rft.issue=6&rft.spage=431&rft.epage=438&rft.pages=431-438&rft.issn=0302-8933&rft.eissn=1432-072X&rft_id=info:doi/10.1007/s00203-013-0890-x&rft_dat=%3Cproquest_cross%3E1357497687%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1356904927&rft_id=info:pmid/23624722&rfr_iscdi=true