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Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5
Gluconacetobacter diazotrophicus is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of G. diazotrophicus . Sequence analysis revealed three ORFs, ( feuA, feuB, and feuC ) organized as an...
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Published in: | Archives of microbiology 2013-06, Vol.195 (6), p.431-438 |
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container_title | Archives of microbiology |
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creator | Urzúa, Lucia Soto Vázquez-Candanedo, Ada P. Sánchez-Espíndola, Adriana Ramírez, Carlos Ávila Baca, Beatriz E. |
description | Gluconacetobacter diazotrophicus
is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of
G. diazotrophicus
. Sequence analysis revealed three ORFs, (
feuA, feuB,
and
feuC
) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the
feu
operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of
G. diazotrophicus
under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km
R
-mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km
R
-mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of
G. diazotrophicus
. |
doi_str_mv | 10.1007/s00203-013-0890-x |
format | article |
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is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of
G. diazotrophicus
. Sequence analysis revealed three ORFs, (
feuA, feuB,
and
feuC
) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the
feu
operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of
G. diazotrophicus
under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km
R
-mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km
R
-mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of
G. diazotrophicus
.</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-013-0890-x</identifier><identifier>PMID: 23624722</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>ABC transporters ; Adenosine Triphosphatases - genetics ; Amino acids ; ATP-Binding Cassette Transporters - genetics ; Bacterial Proteins - genetics ; Biochemistry ; Biological Transport ; Biomedical and Life Sciences ; Biotechnology ; Cell Biology ; Cloning ; Ecology ; Gluconacetobacter - genetics ; Gluconacetobacter - metabolism ; Gluconacetobacter diazotrophicus ; Iron ; Iron - metabolism ; Life Sciences ; Membrane Transport Proteins - genetics ; Microbial Ecology ; Microbiology ; Microorganisms ; Nitrates ; Nitrogen ; Nitrogen Fixation ; Nutrient deficiency ; Operon ; Original Paper ; Periplasmic Binding Proteins - genetics ; Plasmids ; Saccharum - microbiology ; Sucrose ; Sugarcane</subject><ispartof>Archives of microbiology, 2013-06, Vol.195 (6), p.431-438</ispartof><rights>Springer-Verlag Berlin Heidelberg 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</citedby><cites>FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23624722$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Urzúa, Lucia Soto</creatorcontrib><creatorcontrib>Vázquez-Candanedo, Ada P.</creatorcontrib><creatorcontrib>Sánchez-Espíndola, Adriana</creatorcontrib><creatorcontrib>Ramírez, Carlos Ávila</creatorcontrib><creatorcontrib>Baca, Beatriz E.</creatorcontrib><title>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>Gluconacetobacter diazotrophicus
is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of
G. diazotrophicus
. Sequence analysis revealed three ORFs, (
feuA, feuB,
and
feuC
) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the
feu
operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of
G. diazotrophicus
under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km
R
-mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km
R
-mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of
G. diazotrophicus
.</description><subject>ABC transporters</subject><subject>Adenosine Triphosphatases - genetics</subject><subject>Amino acids</subject><subject>ATP-Binding Cassette Transporters - genetics</subject><subject>Bacterial Proteins - genetics</subject><subject>Biochemistry</subject><subject>Biological Transport</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Cloning</subject><subject>Ecology</subject><subject>Gluconacetobacter - genetics</subject><subject>Gluconacetobacter - metabolism</subject><subject>Gluconacetobacter diazotrophicus</subject><subject>Iron</subject><subject>Iron - metabolism</subject><subject>Life Sciences</subject><subject>Membrane Transport Proteins - genetics</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Nitrates</subject><subject>Nitrogen</subject><subject>Nitrogen Fixation</subject><subject>Nutrient deficiency</subject><subject>Operon</subject><subject>Original Paper</subject><subject>Periplasmic Binding Proteins - genetics</subject><subject>Plasmids</subject><subject>Saccharum - microbiology</subject><subject>Sucrose</subject><subject>Sugarcane</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNqNkc1O3DAUha2qCKbTPgAbZKkbNinXP0ns5TCiFGkkWLBgZzmOwxhl7GAnEvD09TRQVUiVWNi-uv7OtY8OQscEfhCA-iwBUGAFkLyEhOLpE1oQzmgBNb37jBbAgBZCMnaEvqT0AECoEOIQHVFWUV5TukDhqrV-dJ0zenTBY-1bbLY6ajPa6F7mZuhyH7uYy9X5Go9R-zSEmAkcBrtvO48v-8kEr40dQ_NHjVunX8IYw7B1Zkr4Rve4_IoOOt0n--31XKLbnxe361_F5vryar3aFIZDORZUA6fZV0uaioHgHc27IQ1UwKrSsI4RU_OmtSXjhtESpBFC0roinYZWsyU6nccOMTxONo1q55Kxfa-9DVNShEkpQZbAPoCWNZd1JeqMfn-HPoQp-uxjT1USeP5CpshMmRhSirZTQ3Q7HZ8VAbXPTc25qexP7XNTT1lz8jp5ana2_at4CyoDdAZSvvL3Nv7z9H-n_gY2TaJq</recordid><startdate>20130601</startdate><enddate>20130601</enddate><creator>Urzúa, Lucia Soto</creator><creator>Vázquez-Candanedo, Ada P.</creator><creator>Sánchez-Espíndola, Adriana</creator><creator>Ramírez, Carlos Ávila</creator><creator>Baca, Beatriz E.</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20130601</creationdate><title>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</title><author>Urzúa, Lucia Soto ; Vázquez-Candanedo, Ada P. ; Sánchez-Espíndola, Adriana ; Ramírez, Carlos Ávila ; Baca, Beatriz E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c405t-2a042013d1b63084f2308c1b060365c3f31c74bde534c32509c8892761fa0da3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>ABC transporters</topic><topic>Adenosine Triphosphatases - 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Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Urzúa, Lucia Soto</au><au>Vázquez-Candanedo, Ada P.</au><au>Sánchez-Espíndola, Adriana</au><au>Ramírez, Carlos Ávila</au><au>Baca, Beatriz E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2013-06-01</date><risdate>2013</risdate><volume>195</volume><issue>6</issue><spage>431</spage><epage>438</epage><pages>431-438</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Gluconacetobacter diazotrophicus
is a nitrogen-fixing bacterium and endophyte of sugarcane. We have cloned and sequenced the genes coding for the components of the iron ABC-type acquisition system of
G. diazotrophicus
. Sequence analysis revealed three ORFs, (
feuA, feuB,
and
feuC
) organized as an operon and encoding polypeptides of 346 (38 kDa), 342 (34.2 kDa), and 240 (26 kDa) amino acids, respectively. The deduced translation products of the
feu
operon showed similarity with a periplasmic solute-binding protein (FeuA), permease (FeuB), and ATPase (FeuC) involved in Fe transport. The role of FeuB in the survival of
G. diazotrophicus
under iron depletion was evaluated by comparing the ability of wild-type and FeuB-Km
R
-mutant strains in a medium without iron supplementation and in a medium containing 2, 2′-dipyridyl (DP). Growth of the mutant was affected in the medium containing DP. The operon was expressed at higher levels in cells depleted for iron than in those that contained the metal. A decrease in nitrogenase activity was observed with the FeuB-Km
R
-mutant strain that with the wild-type under iron deficiency conditions, suggesting that the Feu operon play role in Fe nutrition of
G. diazotrophicus
.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>23624722</pmid><doi>10.1007/s00203-013-0890-x</doi><tpages>8</tpages></addata></record> |
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source | Springer Nature |
subjects | ABC transporters Adenosine Triphosphatases - genetics Amino acids ATP-Binding Cassette Transporters - genetics Bacterial Proteins - genetics Biochemistry Biological Transport Biomedical and Life Sciences Biotechnology Cell Biology Cloning Ecology Gluconacetobacter - genetics Gluconacetobacter - metabolism Gluconacetobacter diazotrophicus Iron Iron - metabolism Life Sciences Membrane Transport Proteins - genetics Microbial Ecology Microbiology Microorganisms Nitrates Nitrogen Nitrogen Fixation Nutrient deficiency Operon Original Paper Periplasmic Binding Proteins - genetics Plasmids Saccharum - microbiology Sucrose Sugarcane |
title | Identification and characterization of an iron ABC transporter operon in Gluconacetobacter diazotrophicus Pal 5 |
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