Structure-Based Design of Small-Molecule Ligands of Phosphofructokinase-2 Activating or Inhibiting Glycolysis

• Published in: ChemMedChem 2013-08, Vol.8 (8), p.1322-1329
• Main Authors: Pyrkov, Timothy V., Sevostyanova, Irina A., Schmalhausen, Elena V., Shkoporov, Andrei N., Vinnik, Andrei A., Muronetz, Vladimir I., Severin, Fedor F., Fedichev, Peter O.
• Format: Article
• Language: English
• Subjects: Animals; Binding Sites; cancer; Catalytic Domain; Cell Proliferation - drug effects; Computer-Aided Design; Drug Design; Enzyme Inhibitors - chemistry; Enzyme Inhibitors - pharmacology; glycolysis; Glycolysis - drug effects; HeLa Cells; Humans; Kinases; Ligands; Medical research; metabolism; Mice; Molecular Docking Simulation; Muscle, Skeletal - metabolism; Phosphofructokinase-2 - antagonists & inhibitors; Phosphofructokinase-2 - metabolism; phosphofructokinases; Rats; Small Molecule Libraries - chemistry; Small Molecule Libraries - pharmacology; Structure-Activity Relationship; Triazoles - chemistry; Triazoles - pharmacology
• ISSN: 1860-7179; 1860-7187
• DOI: 10.1002/cmdc.201300154

Glycolysis lies at the basis of metabolism and cell energy supply. The disregulation of glycolysis is involved in such pathological processes as cancer proliferation, neurodegenerative diseases, and amplification of ischemic damage. Phosphofructokinase‐2 (PFK‐2), a bifunctional enzyme and regulator of glycolytic flux, has recently emerged as a promising anticancer target. Herein, the computer‐aided design of a new class of aminofurazan‐triazole regulators of PFK‐2 is described along with the results of their in vitro evaluation. The aminofurazan‐triazoles differ from other recently described inhibitors of PFK‐2 and demonstrate the ability to modulate glycolytic flux in rat muscle lysate, producing a twofold decrease by inhibitors and fourfold increase by activators. The most potent compounds in the series were shown to inhibit the kinase activity of the hypoxia‐inducible form of PFK‐2, PFKFB3, as well as proliferation of HeLa, lung adenocarcinoma, colon adenocarcinoma, and breast cancer cells at concentrations in the low micromolar range. Fruct‐o so good! Using a structure‐based approach, potential small‐molecule regulators of phosphofructokinase‐2, a bifunctional enzyme and regulator of glycolytic flux, were discovered. The most potent inhibitors of kinase activity in the series also inhibited the proliferation of HeLa, lung adenocarcinoma, colon adenocarcinoma, and breast cancer cells at concentrations in the low micromolar range.