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Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns
RATIONALE Glycerol‐based alkyl ether lipids are ubiquitous components in marine sediments. In order to explore their structural diversity and biological sources, marine sediment samples from diverse environments were analyzed and the mass spectra of widely distributed, novel glycerol di‐ and tetraet...
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Published in: | Rapid communications in mass spectrometry 2012-10, Vol.26 (19), p.2295-2302 |
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creator | Liu, Xiao-Lei Summons, Roger E. Hinrichs, Kai-Uwe |
description | RATIONALE
Glycerol‐based alkyl ether lipids are ubiquitous components in marine sediments. In order to explore their structural diversity and biological sources, marine sediment samples from diverse environments were analyzed and the mass spectra of widely distributed, novel glycerol di‐ and tetraethers were examined systematically.
METHODS
Lipid extracts of twelve globally distributed marine subsurface sediments were analyzed by atmospheric pressure chemical ionization mass spectrometry (APCI‐MS). Tandem mass (MS/MS) spectra of compounds were obtained with a quadrupole time‐of‐flight (qTOF) mass spectrometer.
RESULTS
In addition to the well‐established isoprenoidal glycerol dialkyl glycerol tetraether (isoprenoidal GDGT) and branched GDGT, suites of novel lipids were detected in all studied samples. These lipids include the following classes of tentatively identified compounds: isoprenoidal glycerol dialkanol diether (isoprenoidal GDD), hydroxylated isoprenoidal GDGT (OH‐GDGT), hybrid isoprenoidal/branched GDGT (IB‐GDGT), hydroxylated isoprenoidal GDD (OH‐GDD), overly branched GDGT (OB‐GDGT), sparsely branched GDGT (SB‐GDGT) and an abundant H‐shaped GDGT with the [M+H]+ ion of m/z 1020 (H‐1020).
CONCLUSIONS
Characteristic MS/MS fragmentation patterns provided mass spectral 'fingerprints' for the recognition of diverse and prominent glycerol ether lipids. The ubiquitous distribution and substantial abundance of these glycerol ethers, as well as their structural variability, suggest a significant ecological role of their source organisms in various marine environments. Copyright © 2012 John Wiley & Sons, Ltd. |
doi_str_mv | 10.1002/rcm.6355 |
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fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1439729787</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1038615086</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4865-81fa229fc29504892e9690fbf4a0a056755ab9152f6e6b89e1fbcedf6f5f21973</originalsourceid><addsrcrecordid>eNqN0V9r1TAYBvAgijtOwU8gAW-86UzSJm28c2dzClPB-ecypO2bmq1NuiR1O1_DT2zOdpwgCF4Fkl8eeHgQekrJASWEvQzddCBKzu-hFSWyLggr6X20IpLToqKy2UOPYjwnhFLOyEO0x5jkomR0hX4eXydwvXUDTt8BXzh_5XDQbgDsDR7GTQfBjxjyY8CjnW0fsXU3FtwPG7ybwKVXOKawdGkJesQ6RjvcXEfc6gg99vmDdj1MeMqPOM7Qpa00QQ9bp5PNZNYpQXDxMXpg9Bjhye7cR1_eHH9evy1OP568W78-LbqqEbxoqNG5h-lyF1I1koEUkpjWVJpowkXNuW5lLmwEiLaRQE3bQW-E4YZRWZf76MVt7hz85QIxqcnGDsZRO_BLVLQqZc1k3fwHJWUjKCeNyPT5X_TcL8HlIormhSrKCJN_ArvgYwxg1BzspMMmR6ntpCpPqraTZvpsF7i0E_R38PeGGRS34MqOsPlnkPq0fr8L3HkbE1zfeR0ulKjLmqtvH07UUXP49fCMHamz8hdjSLuk</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1355412029</pqid></control><display><type>article</type><title>Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns</title><source>Wiley-Blackwell Read & Publish Collection</source><creator>Liu, Xiao-Lei ; Summons, Roger E. ; Hinrichs, Kai-Uwe</creator><creatorcontrib>Liu, Xiao-Lei ; Summons, Roger E. ; Hinrichs, Kai-Uwe</creatorcontrib><description>RATIONALE
Glycerol‐based alkyl ether lipids are ubiquitous components in marine sediments. In order to explore their structural diversity and biological sources, marine sediment samples from diverse environments were analyzed and the mass spectra of widely distributed, novel glycerol di‐ and tetraethers were examined systematically.
METHODS
Lipid extracts of twelve globally distributed marine subsurface sediments were analyzed by atmospheric pressure chemical ionization mass spectrometry (APCI‐MS). Tandem mass (MS/MS) spectra of compounds were obtained with a quadrupole time‐of‐flight (qTOF) mass spectrometer.
RESULTS
In addition to the well‐established isoprenoidal glycerol dialkyl glycerol tetraether (isoprenoidal GDGT) and branched GDGT, suites of novel lipids were detected in all studied samples. These lipids include the following classes of tentatively identified compounds: isoprenoidal glycerol dialkanol diether (isoprenoidal GDD), hydroxylated isoprenoidal GDGT (OH‐GDGT), hybrid isoprenoidal/branched GDGT (IB‐GDGT), hydroxylated isoprenoidal GDD (OH‐GDD), overly branched GDGT (OB‐GDGT), sparsely branched GDGT (SB‐GDGT) and an abundant H‐shaped GDGT with the [M+H]+ ion of m/z 1020 (H‐1020).
CONCLUSIONS
Characteristic MS/MS fragmentation patterns provided mass spectral 'fingerprints' for the recognition of diverse and prominent glycerol ether lipids. The ubiquitous distribution and substantial abundance of these glycerol ethers, as well as their structural variability, suggest a significant ecological role of their source organisms in various marine environments. Copyright © 2012 John Wiley & Sons, Ltd.</description><identifier>ISSN: 0951-4198</identifier><identifier>EISSN: 1097-0231</identifier><identifier>DOI: 10.1002/rcm.6355</identifier><identifier>PMID: 22956321</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>Branched ; Chromatography, High Pressure Liquid ; Ethers ; Gas Chromatography-Mass Spectrometry ; Geologic Sediments - chemistry ; Glycerols ; Glyceryl Ethers - chemistry ; Lipids ; Lipids - chemistry ; Marine ; Mass spectrometry ; Methanococcus - chemistry ; Sediments ; Soil - chemistry ; Spectra ; Tandem Mass Spectrometry - methods</subject><ispartof>Rapid communications in mass spectrometry, 2012-10, Vol.26 (19), p.2295-2302</ispartof><rights>Copyright © 2012 John Wiley & Sons, Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4865-81fa229fc29504892e9690fbf4a0a056755ab9152f6e6b89e1fbcedf6f5f21973</citedby><cites>FETCH-LOGICAL-c4865-81fa229fc29504892e9690fbf4a0a056755ab9152f6e6b89e1fbcedf6f5f21973</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22956321$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Xiao-Lei</creatorcontrib><creatorcontrib>Summons, Roger E.</creatorcontrib><creatorcontrib>Hinrichs, Kai-Uwe</creatorcontrib><title>Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns</title><title>Rapid communications in mass spectrometry</title><addtitle>Rapid Commun. Mass Spectrom</addtitle><description>RATIONALE
Glycerol‐based alkyl ether lipids are ubiquitous components in marine sediments. In order to explore their structural diversity and biological sources, marine sediment samples from diverse environments were analyzed and the mass spectra of widely distributed, novel glycerol di‐ and tetraethers were examined systematically.
METHODS
Lipid extracts of twelve globally distributed marine subsurface sediments were analyzed by atmospheric pressure chemical ionization mass spectrometry (APCI‐MS). Tandem mass (MS/MS) spectra of compounds were obtained with a quadrupole time‐of‐flight (qTOF) mass spectrometer.
RESULTS
In addition to the well‐established isoprenoidal glycerol dialkyl glycerol tetraether (isoprenoidal GDGT) and branched GDGT, suites of novel lipids were detected in all studied samples. These lipids include the following classes of tentatively identified compounds: isoprenoidal glycerol dialkanol diether (isoprenoidal GDD), hydroxylated isoprenoidal GDGT (OH‐GDGT), hybrid isoprenoidal/branched GDGT (IB‐GDGT), hydroxylated isoprenoidal GDD (OH‐GDD), overly branched GDGT (OB‐GDGT), sparsely branched GDGT (SB‐GDGT) and an abundant H‐shaped GDGT with the [M+H]+ ion of m/z 1020 (H‐1020).
CONCLUSIONS
Characteristic MS/MS fragmentation patterns provided mass spectral 'fingerprints' for the recognition of diverse and prominent glycerol ether lipids. The ubiquitous distribution and substantial abundance of these glycerol ethers, as well as their structural variability, suggest a significant ecological role of their source organisms in various marine environments. Copyright © 2012 John Wiley & Sons, Ltd.</description><subject>Branched</subject><subject>Chromatography, High Pressure Liquid</subject><subject>Ethers</subject><subject>Gas Chromatography-Mass Spectrometry</subject><subject>Geologic Sediments - chemistry</subject><subject>Glycerols</subject><subject>Glyceryl Ethers - chemistry</subject><subject>Lipids</subject><subject>Lipids - chemistry</subject><subject>Marine</subject><subject>Mass spectrometry</subject><subject>Methanococcus - chemistry</subject><subject>Sediments</subject><subject>Soil - chemistry</subject><subject>Spectra</subject><subject>Tandem Mass Spectrometry - methods</subject><issn>0951-4198</issn><issn>1097-0231</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqN0V9r1TAYBvAgijtOwU8gAW-86UzSJm28c2dzClPB-ecypO2bmq1NuiR1O1_DT2zOdpwgCF4Fkl8eeHgQekrJASWEvQzddCBKzu-hFSWyLggr6X20IpLToqKy2UOPYjwnhFLOyEO0x5jkomR0hX4eXydwvXUDTt8BXzh_5XDQbgDsDR7GTQfBjxjyY8CjnW0fsXU3FtwPG7ybwKVXOKawdGkJesQ6RjvcXEfc6gg99vmDdj1MeMqPOM7Qpa00QQ9bp5PNZNYpQXDxMXpg9Bjhye7cR1_eHH9evy1OP568W78-LbqqEbxoqNG5h-lyF1I1koEUkpjWVJpowkXNuW5lLmwEiLaRQE3bQW-E4YZRWZf76MVt7hz85QIxqcnGDsZRO_BLVLQqZc1k3fwHJWUjKCeNyPT5X_TcL8HlIormhSrKCJN_ArvgYwxg1BzspMMmR6ntpCpPqraTZvpsF7i0E_R38PeGGRS34MqOsPlnkPq0fr8L3HkbE1zfeR0ulKjLmqtvH07UUXP49fCMHamz8hdjSLuk</recordid><startdate>20121015</startdate><enddate>20121015</enddate><creator>Liu, Xiao-Lei</creator><creator>Summons, Roger E.</creator><creator>Hinrichs, Kai-Uwe</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>JQ2</scope><scope>L7M</scope><scope>7X8</scope></search><sort><creationdate>20121015</creationdate><title>Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns</title><author>Liu, Xiao-Lei ; Summons, Roger E. ; Hinrichs, Kai-Uwe</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4865-81fa229fc29504892e9690fbf4a0a056755ab9152f6e6b89e1fbcedf6f5f21973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Branched</topic><topic>Chromatography, High Pressure Liquid</topic><topic>Ethers</topic><topic>Gas Chromatography-Mass Spectrometry</topic><topic>Geologic Sediments - chemistry</topic><topic>Glycerols</topic><topic>Glyceryl Ethers - chemistry</topic><topic>Lipids</topic><topic>Lipids - chemistry</topic><topic>Marine</topic><topic>Mass spectrometry</topic><topic>Methanococcus - chemistry</topic><topic>Sediments</topic><topic>Soil - chemistry</topic><topic>Spectra</topic><topic>Tandem Mass Spectrometry - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Xiao-Lei</creatorcontrib><creatorcontrib>Summons, Roger E.</creatorcontrib><creatorcontrib>Hinrichs, Kai-Uwe</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>Rapid communications in mass spectrometry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Xiao-Lei</au><au>Summons, Roger E.</au><au>Hinrichs, Kai-Uwe</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns</atitle><jtitle>Rapid communications in mass spectrometry</jtitle><addtitle>Rapid Commun. Mass Spectrom</addtitle><date>2012-10-15</date><risdate>2012</risdate><volume>26</volume><issue>19</issue><spage>2295</spage><epage>2302</epage><pages>2295-2302</pages><issn>0951-4198</issn><eissn>1097-0231</eissn><abstract>RATIONALE
Glycerol‐based alkyl ether lipids are ubiquitous components in marine sediments. In order to explore their structural diversity and biological sources, marine sediment samples from diverse environments were analyzed and the mass spectra of widely distributed, novel glycerol di‐ and tetraethers were examined systematically.
METHODS
Lipid extracts of twelve globally distributed marine subsurface sediments were analyzed by atmospheric pressure chemical ionization mass spectrometry (APCI‐MS). Tandem mass (MS/MS) spectra of compounds were obtained with a quadrupole time‐of‐flight (qTOF) mass spectrometer.
RESULTS
In addition to the well‐established isoprenoidal glycerol dialkyl glycerol tetraether (isoprenoidal GDGT) and branched GDGT, suites of novel lipids were detected in all studied samples. These lipids include the following classes of tentatively identified compounds: isoprenoidal glycerol dialkanol diether (isoprenoidal GDD), hydroxylated isoprenoidal GDGT (OH‐GDGT), hybrid isoprenoidal/branched GDGT (IB‐GDGT), hydroxylated isoprenoidal GDD (OH‐GDD), overly branched GDGT (OB‐GDGT), sparsely branched GDGT (SB‐GDGT) and an abundant H‐shaped GDGT with the [M+H]+ ion of m/z 1020 (H‐1020).
CONCLUSIONS
Characteristic MS/MS fragmentation patterns provided mass spectral 'fingerprints' for the recognition of diverse and prominent glycerol ether lipids. The ubiquitous distribution and substantial abundance of these glycerol ethers, as well as their structural variability, suggest a significant ecological role of their source organisms in various marine environments. Copyright © 2012 John Wiley & Sons, Ltd.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>22956321</pmid><doi>10.1002/rcm.6355</doi><tpages>8</tpages></addata></record> |
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subjects | Branched Chromatography, High Pressure Liquid Ethers Gas Chromatography-Mass Spectrometry Geologic Sediments - chemistry Glycerols Glyceryl Ethers - chemistry Lipids Lipids - chemistry Marine Mass spectrometry Methanococcus - chemistry Sediments Soil - chemistry Spectra Tandem Mass Spectrometry - methods |
title | Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns |
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