Loading…

Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils

► Impediments to TPH degradation were assessed using chemical and molecular assays. ► High TPH concentrations (68.9gkg−1) affected alkB bacterial community diversity. ► The lack of TPH degradation following ENA was due to limited TPH bioavailability. ► The presence of alkB genes does not always guar...

Full description

Saved in:
Bibliographic Details
Published in:Journal of hazardous materials 2013-10, Vol.261, p.847-853
Main Authors: Adetutu, Eric, Weber, John, Aleer, Sam, Dandie, Catherine E., Aburto-Medina, Arturo, Ball, Andrew S., Juhasz, Albert L.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3
cites cdi_FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3
container_end_page 853
container_issue
container_start_page 847
container_title Journal of hazardous materials
container_volume 261
creator Adetutu, Eric
Weber, John
Aleer, Sam
Dandie, Catherine E.
Aburto-Medina, Arturo
Ball, Andrew S.
Juhasz, Albert L.
description ► Impediments to TPH degradation were assessed using chemical and molecular assays. ► High TPH concentrations (68.9gkg−1) affected alkB bacterial community diversity. ► The lack of TPH degradation following ENA was due to limited TPH bioavailability. ► The presence of alkB genes does not always guarantee bioremediation success. In this study, impediments to hydrocarbon biodegradation in contaminated soils were assessed using chemical and molecular methodologies. Two long-term hydrocarbon contaminated soils were utilised which were similar in physico-chemical properties but differed in the extent of hydrocarbon (C10–C40) contamination (S1: 16.5gkg−1; S2: 68.9gkg−1). Under enhanced natural attenuation (ENA) conditions, hydrocarbon biodegradation was observed in S1 microcosms (26.4% reduction in C10–C40 hydrocarbons), however, ENA was unable to stimulate degradation in S2. Although eubacterial communities (PCR-DGGE analysis) were similar for both soils, the alkB bacterial community was less diverse in S2 presumably due to impacts associated with elevated hydrocarbons. When hydrocarbon bioaccessibility was assessed using HP-β-CD extraction, large residual concentrations remained in the soil following the extraction procedure. However, when linear regression models were used to predict the endpoints of hydrocarbon degradation, there was no significant difference (P>0.05) between HP-β-CD predicted and microcosm measured biodegradation endpoints. This data suggested that the lack of hydrocarbon degradation in S2 resulted primarily from limited hydrocarbon bioavailability.
doi_str_mv 10.1016/j.jhazmat.2013.01.052
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1446874447</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0304389413000770</els_id><sourcerecordid>1446874447</sourcerecordid><originalsourceid>FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3</originalsourceid><addsrcrecordid>eNqFkE1v1DAQhi1ERbeFnwDKBYlLgp1x4uSEqoovqVIPhbPldcZdrxJ78Xhbtb8er3aBI6fRjJ6ZefUw9lbwRnDRf9w22415XkxuWi6g4aLhXfuCrcSgoAaA_iVbceCyhmGU5-yCaMs5F6qTr9h5C7KToxhW7O6KCIl8uK_8ssPJLxgyVTlWm6cpRWvSOoZq7eOE98lMJvvS-lA9oskbTDhVNoZsFh9MLg1FP9NrdubMTPjmVC_Zzy-ff1x_q29uv36_vrqprYQ216KHQUIPo1NOth13yPsW4DB2a1BDCTsaAMSuGwZQTinjJjnanhvOezBwyT4c7-5S_LVHynrxZHGeTcC4Jy2k7AclpVQF7Y6oTZEoodO75BeTnrTg-uBTb_XJpz741Fzo4rPsvTu92K8XnP5u_RFYgPcnwJA1s0smWE__ODWKDgQU7tORwyLkwWPSZD0GW4wntFlP0f8nym-GTZYE</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1446874447</pqid></control><display><type>article</type><title>Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils</title><source>ScienceDirect Freedom Collection</source><creator>Adetutu, Eric ; Weber, John ; Aleer, Sam ; Dandie, Catherine E. ; Aburto-Medina, Arturo ; Ball, Andrew S. ; Juhasz, Albert L.</creator><creatorcontrib>Adetutu, Eric ; Weber, John ; Aleer, Sam ; Dandie, Catherine E. ; Aburto-Medina, Arturo ; Ball, Andrew S. ; Juhasz, Albert L.</creatorcontrib><description>► Impediments to TPH degradation were assessed using chemical and molecular assays. ► High TPH concentrations (68.9gkg−1) affected alkB bacterial community diversity. ► The lack of TPH degradation following ENA was due to limited TPH bioavailability. ► The presence of alkB genes does not always guarantee bioremediation success. In this study, impediments to hydrocarbon biodegradation in contaminated soils were assessed using chemical and molecular methodologies. Two long-term hydrocarbon contaminated soils were utilised which were similar in physico-chemical properties but differed in the extent of hydrocarbon (C10–C40) contamination (S1: 16.5gkg−1; S2: 68.9gkg−1). Under enhanced natural attenuation (ENA) conditions, hydrocarbon biodegradation was observed in S1 microcosms (26.4% reduction in C10–C40 hydrocarbons), however, ENA was unable to stimulate degradation in S2. Although eubacterial communities (PCR-DGGE analysis) were similar for both soils, the alkB bacterial community was less diverse in S2 presumably due to impacts associated with elevated hydrocarbons. When hydrocarbon bioaccessibility was assessed using HP-β-CD extraction, large residual concentrations remained in the soil following the extraction procedure. However, when linear regression models were used to predict the endpoints of hydrocarbon degradation, there was no significant difference (P&gt;0.05) between HP-β-CD predicted and microcosm measured biodegradation endpoints. This data suggested that the lack of hydrocarbon degradation in S2 resulted primarily from limited hydrocarbon bioavailability.</description><identifier>ISSN: 0304-3894</identifier><identifier>EISSN: 1873-3336</identifier><identifier>DOI: 10.1016/j.jhazmat.2013.01.052</identifier><identifier>PMID: 23454918</identifier><identifier>CODEN: JHMAD9</identifier><language>eng</language><publisher>Kidlington: Elsevier B.V</publisher><subject>AlkB ; Applied sciences ; Bioavailability ; Biodegradation ; Biodegradation, Environmental ; Biological Availability ; Bioremediation ; Cytochrome P-450 CYP4A - genetics ; Decontamination. Miscellaneous ; DNA, Ribosomal - genetics ; Exact sciences and technology ; Genes, Bacterial ; Hydrocarbons ; Hydrocarbons - metabolism ; Pollution ; Rhodococcus - genetics ; Rhodococcus - metabolism ; Soil and sediments pollution ; Soil Microbiology ; Soil Pollutants - metabolism</subject><ispartof>Journal of hazardous materials, 2013-10, Vol.261, p.847-853</ispartof><rights>2013 Elsevier B.V.</rights><rights>2014 INIST-CNRS</rights><rights>Copyright © 2013 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3</citedby><cites>FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>309,310,314,780,784,789,790,23929,23930,25139,27923,27924</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=27915313$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23454918$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Adetutu, Eric</creatorcontrib><creatorcontrib>Weber, John</creatorcontrib><creatorcontrib>Aleer, Sam</creatorcontrib><creatorcontrib>Dandie, Catherine E.</creatorcontrib><creatorcontrib>Aburto-Medina, Arturo</creatorcontrib><creatorcontrib>Ball, Andrew S.</creatorcontrib><creatorcontrib>Juhasz, Albert L.</creatorcontrib><title>Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils</title><title>Journal of hazardous materials</title><addtitle>J Hazard Mater</addtitle><description>► Impediments to TPH degradation were assessed using chemical and molecular assays. ► High TPH concentrations (68.9gkg−1) affected alkB bacterial community diversity. ► The lack of TPH degradation following ENA was due to limited TPH bioavailability. ► The presence of alkB genes does not always guarantee bioremediation success. In this study, impediments to hydrocarbon biodegradation in contaminated soils were assessed using chemical and molecular methodologies. Two long-term hydrocarbon contaminated soils were utilised which were similar in physico-chemical properties but differed in the extent of hydrocarbon (C10–C40) contamination (S1: 16.5gkg−1; S2: 68.9gkg−1). Under enhanced natural attenuation (ENA) conditions, hydrocarbon biodegradation was observed in S1 microcosms (26.4% reduction in C10–C40 hydrocarbons), however, ENA was unable to stimulate degradation in S2. Although eubacterial communities (PCR-DGGE analysis) were similar for both soils, the alkB bacterial community was less diverse in S2 presumably due to impacts associated with elevated hydrocarbons. When hydrocarbon bioaccessibility was assessed using HP-β-CD extraction, large residual concentrations remained in the soil following the extraction procedure. However, when linear regression models were used to predict the endpoints of hydrocarbon degradation, there was no significant difference (P&gt;0.05) between HP-β-CD predicted and microcosm measured biodegradation endpoints. This data suggested that the lack of hydrocarbon degradation in S2 resulted primarily from limited hydrocarbon bioavailability.</description><subject>AlkB</subject><subject>Applied sciences</subject><subject>Bioavailability</subject><subject>Biodegradation</subject><subject>Biodegradation, Environmental</subject><subject>Biological Availability</subject><subject>Bioremediation</subject><subject>Cytochrome P-450 CYP4A - genetics</subject><subject>Decontamination. Miscellaneous</subject><subject>DNA, Ribosomal - genetics</subject><subject>Exact sciences and technology</subject><subject>Genes, Bacterial</subject><subject>Hydrocarbons</subject><subject>Hydrocarbons - metabolism</subject><subject>Pollution</subject><subject>Rhodococcus - genetics</subject><subject>Rhodococcus - metabolism</subject><subject>Soil and sediments pollution</subject><subject>Soil Microbiology</subject><subject>Soil Pollutants - metabolism</subject><issn>0304-3894</issn><issn>1873-3336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNqFkE1v1DAQhi1ERbeFnwDKBYlLgp1x4uSEqoovqVIPhbPldcZdrxJ78Xhbtb8er3aBI6fRjJ6ZefUw9lbwRnDRf9w22415XkxuWi6g4aLhXfuCrcSgoAaA_iVbceCyhmGU5-yCaMs5F6qTr9h5C7KToxhW7O6KCIl8uK_8ssPJLxgyVTlWm6cpRWvSOoZq7eOE98lMJvvS-lA9oskbTDhVNoZsFh9MLg1FP9NrdubMTPjmVC_Zzy-ff1x_q29uv36_vrqprYQ216KHQUIPo1NOth13yPsW4DB2a1BDCTsaAMSuGwZQTinjJjnanhvOezBwyT4c7-5S_LVHynrxZHGeTcC4Jy2k7AclpVQF7Y6oTZEoodO75BeTnrTg-uBTb_XJpz741Fzo4rPsvTu92K8XnP5u_RFYgPcnwJA1s0smWE__ODWKDgQU7tORwyLkwWPSZD0GW4wntFlP0f8nym-GTZYE</recordid><startdate>20131015</startdate><enddate>20131015</enddate><creator>Adetutu, Eric</creator><creator>Weber, John</creator><creator>Aleer, Sam</creator><creator>Dandie, Catherine E.</creator><creator>Aburto-Medina, Arturo</creator><creator>Ball, Andrew S.</creator><creator>Juhasz, Albert L.</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20131015</creationdate><title>Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils</title><author>Adetutu, Eric ; Weber, John ; Aleer, Sam ; Dandie, Catherine E. ; Aburto-Medina, Arturo ; Ball, Andrew S. ; Juhasz, Albert L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>AlkB</topic><topic>Applied sciences</topic><topic>Bioavailability</topic><topic>Biodegradation</topic><topic>Biodegradation, Environmental</topic><topic>Biological Availability</topic><topic>Bioremediation</topic><topic>Cytochrome P-450 CYP4A - genetics</topic><topic>Decontamination. Miscellaneous</topic><topic>DNA, Ribosomal - genetics</topic><topic>Exact sciences and technology</topic><topic>Genes, Bacterial</topic><topic>Hydrocarbons</topic><topic>Hydrocarbons - metabolism</topic><topic>Pollution</topic><topic>Rhodococcus - genetics</topic><topic>Rhodococcus - metabolism</topic><topic>Soil and sediments pollution</topic><topic>Soil Microbiology</topic><topic>Soil Pollutants - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Adetutu, Eric</creatorcontrib><creatorcontrib>Weber, John</creatorcontrib><creatorcontrib>Aleer, Sam</creatorcontrib><creatorcontrib>Dandie, Catherine E.</creatorcontrib><creatorcontrib>Aburto-Medina, Arturo</creatorcontrib><creatorcontrib>Ball, Andrew S.</creatorcontrib><creatorcontrib>Juhasz, Albert L.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of hazardous materials</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Adetutu, Eric</au><au>Weber, John</au><au>Aleer, Sam</au><au>Dandie, Catherine E.</au><au>Aburto-Medina, Arturo</au><au>Ball, Andrew S.</au><au>Juhasz, Albert L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils</atitle><jtitle>Journal of hazardous materials</jtitle><addtitle>J Hazard Mater</addtitle><date>2013-10-15</date><risdate>2013</risdate><volume>261</volume><spage>847</spage><epage>853</epage><pages>847-853</pages><issn>0304-3894</issn><eissn>1873-3336</eissn><coden>JHMAD9</coden><abstract>► Impediments to TPH degradation were assessed using chemical and molecular assays. ► High TPH concentrations (68.9gkg−1) affected alkB bacterial community diversity. ► The lack of TPH degradation following ENA was due to limited TPH bioavailability. ► The presence of alkB genes does not always guarantee bioremediation success. In this study, impediments to hydrocarbon biodegradation in contaminated soils were assessed using chemical and molecular methodologies. Two long-term hydrocarbon contaminated soils were utilised which were similar in physico-chemical properties but differed in the extent of hydrocarbon (C10–C40) contamination (S1: 16.5gkg−1; S2: 68.9gkg−1). Under enhanced natural attenuation (ENA) conditions, hydrocarbon biodegradation was observed in S1 microcosms (26.4% reduction in C10–C40 hydrocarbons), however, ENA was unable to stimulate degradation in S2. Although eubacterial communities (PCR-DGGE analysis) were similar for both soils, the alkB bacterial community was less diverse in S2 presumably due to impacts associated with elevated hydrocarbons. When hydrocarbon bioaccessibility was assessed using HP-β-CD extraction, large residual concentrations remained in the soil following the extraction procedure. However, when linear regression models were used to predict the endpoints of hydrocarbon degradation, there was no significant difference (P&gt;0.05) between HP-β-CD predicted and microcosm measured biodegradation endpoints. This data suggested that the lack of hydrocarbon degradation in S2 resulted primarily from limited hydrocarbon bioavailability.</abstract><cop>Kidlington</cop><pub>Elsevier B.V</pub><pmid>23454918</pmid><doi>10.1016/j.jhazmat.2013.01.052</doi><tpages>7</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0304-3894
ispartof Journal of hazardous materials, 2013-10, Vol.261, p.847-853
issn 0304-3894
1873-3336
language eng
recordid cdi_proquest_miscellaneous_1446874447
source ScienceDirect Freedom Collection
subjects AlkB
Applied sciences
Bioavailability
Biodegradation
Biodegradation, Environmental
Biological Availability
Bioremediation
Cytochrome P-450 CYP4A - genetics
Decontamination. Miscellaneous
DNA, Ribosomal - genetics
Exact sciences and technology
Genes, Bacterial
Hydrocarbons
Hydrocarbons - metabolism
Pollution
Rhodococcus - genetics
Rhodococcus - metabolism
Soil and sediments pollution
Soil Microbiology
Soil Pollutants - metabolism
title Assessing impediments to hydrocarbon biodegradation in weathered contaminated soils
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-08T17%3A13%3A47IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Assessing%20impediments%20to%20hydrocarbon%20biodegradation%20in%20weathered%20contaminated%20soils&rft.jtitle=Journal%20of%20hazardous%20materials&rft.au=Adetutu,%20Eric&rft.date=2013-10-15&rft.volume=261&rft.spage=847&rft.epage=853&rft.pages=847-853&rft.issn=0304-3894&rft.eissn=1873-3336&rft.coden=JHMAD9&rft_id=info:doi/10.1016/j.jhazmat.2013.01.052&rft_dat=%3Cproquest_cross%3E1446874447%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c432t-163843639f7f4250fe062331638fb3780179a33ee558837f77afd49c60a0063a3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1446874447&rft_id=info:pmid/23454918&rfr_iscdi=true