SECRETOOL: integrated secretome analysis tool for fungi

The secretome (full set of secreted proteins) has been studied in multiple fungal genomes to elucidate the potential role of those protein collections involved in a number of metabolic processes from host infection to wood degradation. Being aminoacid composition a key factor to recognize secretory...

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Bibliographic Details
Published in:Amino acids 2014-02, Vol.46 (2), p.471-473
Main Authors: Cortázar, Ana R, Aransay, Ana M, Alfaro, Manuel, Oguiza, José A, Lavín, José L
Format: Article
Language:English
Subjects:
Analytical Chemistry
Biochemical Engineering
Biochemistry
Biomedical and Life Sciences
decayed wood
Fungal Proteins - chemistry
Fungal Proteins - secretion
fungi
genome
Life Sciences
Neurobiology
prediction
proteins
Proteome - chemistry
Proteome - secretion
Proteomics
Sequence Analysis, Protein
Short Communication
Software
world wide web
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Summary:The secretome (full set of secreted proteins) has been studied in multiple fungal genomes to elucidate the potential role of those protein collections involved in a number of metabolic processes from host infection to wood degradation. Being aminoacid composition a key factor to recognize secretory proteins, SECRETOOL comprises a group of web tools that enable secretome predictions out of aminoacid sequence files, up to complete fungal proteomes, in one step. SECRETOOL is freely available on the web at http://genomics.cicbiogune.es/SECRETOOL/Secretool.php .
ISSN:0939-4451
1438-2199
DOI:10.1007/s00726-013-1649-z