Patterns of base usage, nearest neighbour analysis and identification of genes in two completely sequenced chloroplast genomes

A detailed analysis of the tobacco and liverwort chloroplast genomes is reported. The doublet properties of the entire genomes, protein genes, ribosomal protein genes, tDNA, rDNA, introns, non-coding regions and unidentified repeats does not significantly change the doublet properties of these genom...

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Bibliographic Details
Published in:Current genetics 1988-06, Vol.13 (6), p.523-530
Main Author: Sibbald, P.R
Format: Article
Language:English
Subjects:
Agronomy. Soil science and plant productions
Biological and medical sciences
chloroplasts
Classical and quantitative genetics. Population genetics. Molecular genetics
Fundamental and applied biological sciences. Psychology
Generalities. Genetics. Plant material
Genes. Genome
genetic techniques and protocols
Genetics and breeding of economic plants
genome
Marchantia polymorpha
Molecular and cellular biology
Molecular genetics
Nicotiana tabacum
Spinacia oleracea
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Summary:A detailed analysis of the tobacco and liverwort chloroplast genomes is reported. The doublet properties of the entire genomes, protein genes, ribosomal protein genes, tDNA, rDNA, introns, non-coding regions and unidentified repeats does not significantly change the doublet properties of these genomes, suggesting that these properties are not due to presence of inverted repeats. Several unidentified reading frames in both tobacco and liverwort are predicted to be genes.
ISSN:0172-8083
1432-0983
DOI:10.1007/BF02427759