Distribution patterns of Dikarya in arid and semiarid soils of Baja California, Mexico

• Published in: Fungal ecology 2013-02, Vol.6 (1), p.92-101
• Main Authors: Romero-Olivares, Adriana L., Baptista-Rosas, Raúl C., Escalante, Ana E., Bullock, Stephen H., Riquelme, Meritxell
• Format: Article
• Language: English
• Subjects: Alternaria; arid soils; Ascomycetes; Baja California; Basidiomycetes; Ceratobasidium; clones; Coprinellus; Deserts; Dikarya; DNA; DNA libraries; Fungal diversity; Fungi; Gene libraries; internal transcribed spacers; ITS region; Molecular ecology; Mycobiota; Nematoctonus; Penicillium; Penicillium griseofulvum; Phylogeny; Precipitation; rain; Rainfall; restriction fragment length polymorphism; RFLPs; ribosomal DNA; Semiarid ecosystems; semiarid soils; Soil; Tulostoma
• ISSN: 1754-5048
• DOI: 10.1016/j.funeco.2012.09.004

Approximately four-fifths of the land area of Baja California (BC) in Mexico are occupied by arid and semiarid soils, the mycobiota of which is virtually uncharacterized. In the first culture-independent study of the mycobiota of BC, we collected soil from five different locations in the region and constructed a Dikarya-specific gene library for the ITS region of nuclear ribosomal DNA. Clones were analyzed by RFLP, were sequenced for phylogenetic analyses, and diversity and similarity indices were calculated. The ascomycete Penicillium dipodomyicola was the most frequent fungus found in soil at the most arid location studied, and the basidiomycete Coprinellus radians was the most frequent at the location receiving the highest rainfall. Other frequent members of the soil mycobiota were identified as Alternaria spp., Ceratobasidium sp., Coniozyma leucospermi, Nematoctonus robustus, Penicillium griseofulvum, Tulostoma kotlabae and uncultured members of the Dikarya. Several sequences were identified as those of uncultured fungi, one of which was previously reported from other hot deserts. Arid soils and the transitional zones between arid and semiarid soils had the most similar fungal diversity, with the former soils having a community from which basidiomycetes were absent, and the soil receiving the highest precipitation having a community dominated by basidiomycetes. ► Fungal distribution patterns were detected in arid and semiarid Mexican regions. ► Arid and semiarid Mexican regions share fungal diversity with other deserts worldwide. ► Fungi and endemic flora of Baja Californian deserts share a distribution pattern. ► Arid and semiarid soils of Baja California with different abiotic characteristics present different fungal diversity.