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MiRNome expression is deregulated in the peripheral lymphoid compartment of multiple myeloma
Summary MicroRNAs (miRNAs) are short non‐coding RNAs involved in the regulation of gene expression. Selected groups of miRNAs are differentially expressed in various types of cancers. Alterations in miRNAs gene expression have been shown in cells from the B‐cell malignancy, multiple myeloma (MM). Ho...
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Published in: | British journal of haematology 2014-06, Vol.165 (6), p.801-813 |
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creator | Campo, Salvatore Allegra, Alessandro D'Ascola, Angela Alonci, Andrea Scuruchi, Michele Russo, Sabina Avenoso, Angela Gerace, Demetrio Campo, Giuseppe M. Musolino, Caterina |
description | Summary
MicroRNAs (miRNAs) are short non‐coding RNAs involved in the regulation of gene expression. Selected groups of miRNAs are differentially expressed in various types of cancers. Alterations in miRNAs gene expression have been shown in cells from the B‐cell malignancy, multiple myeloma (MM). However, although MM is a disease of plasma cells, abnormalities have been detected in the peripheral blood of the patients.
The goal of our study was to analyse the entire miRNome in peripheral lymphocytes of MM patients using reverse transcription quantitative polymerase chain reaction. Using in silica analysis, we also evaluated some of the most interesting and significant pathways. Analysis revealed that MM samples had a distinct miRNA profile compared to the controls. This resulted in the identification of 203 miRNAs, 85 of which were over‐expressed and 118 under‐expressed. Of these, 184 possessed validated or highly predicted mRNA targets. We identified 12 354 mRNA targets of the transcriptome: 36·4% of the related proteins are involved in death processes while the 21% are required for growth and cell proliferation. We have demonstrated that miRNAs are differentially expressed in the peripheral blood of MM patients compared to controls, affecting some pathways involved in the anti‐apoptotic process, cell proliferation and maybe anti‐angiogenesis. |
doi_str_mv | 10.1111/bjh.12828 |
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MicroRNAs (miRNAs) are short non‐coding RNAs involved in the regulation of gene expression. Selected groups of miRNAs are differentially expressed in various types of cancers. Alterations in miRNAs gene expression have been shown in cells from the B‐cell malignancy, multiple myeloma (MM). However, although MM is a disease of plasma cells, abnormalities have been detected in the peripheral blood of the patients.
The goal of our study was to analyse the entire miRNome in peripheral lymphocytes of MM patients using reverse transcription quantitative polymerase chain reaction. Using in silica analysis, we also evaluated some of the most interesting and significant pathways. Analysis revealed that MM samples had a distinct miRNA profile compared to the controls. This resulted in the identification of 203 miRNAs, 85 of which were over‐expressed and 118 under‐expressed. Of these, 184 possessed validated or highly predicted mRNA targets. We identified 12 354 mRNA targets of the transcriptome: 36·4% of the related proteins are involved in death processes while the 21% are required for growth and cell proliferation. We have demonstrated that miRNAs are differentially expressed in the peripheral blood of MM patients compared to controls, affecting some pathways involved in the anti‐apoptotic process, cell proliferation and maybe anti‐angiogenesis.</description><identifier>ISSN: 0007-1048</identifier><identifier>EISSN: 1365-2141</identifier><identifier>DOI: 10.1111/bjh.12828</identifier><identifier>PMID: 24620752</identifier><identifier>CODEN: BJHEAL</identifier><language>eng</language><publisher>Oxford: Blackwell</publisher><subject>Biological and medical sciences ; cancer ; Case-Control Studies ; Computational Biology ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic ; Hematologic and hematopoietic diseases ; Humans ; Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis ; Leukocytes, Mononuclear - metabolism ; Leukocytes, Mononuclear - pathology ; Lymphocytes - metabolism ; Lymphocytes - pathology ; lymphoid cells ; Medical sciences ; microRNAs ; MicroRNAs - genetics ; Molecular Sequence Annotation ; multiple myeloma ; Multiple Myeloma - genetics ; Multiple Myeloma - metabolism ; Multiple Myeloma - pathology ; Multiple tumors. Solid tumors. Tumors in childhood (general aspects) ; Neoplasm Staging ; Reproducibility of Results ; Signal Transduction ; Transcriptome ; Tumors</subject><ispartof>British journal of haematology, 2014-06, Vol.165 (6), p.801-813</ispartof><rights>2014 John Wiley & Sons Ltd</rights><rights>2015 INIST-CNRS</rights><rights>2014 John Wiley & Sons Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3888-434dddcb92dd0fa3ff4bf427efd8c54f86c0814fa0e01d9a217af3ced5a81d1c3</citedby><cites>FETCH-LOGICAL-c3888-434dddcb92dd0fa3ff4bf427efd8c54f86c0814fa0e01d9a217af3ced5a81d1c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27915,27916</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28535581$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24620752$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Campo, Salvatore</creatorcontrib><creatorcontrib>Allegra, Alessandro</creatorcontrib><creatorcontrib>D'Ascola, Angela</creatorcontrib><creatorcontrib>Alonci, Andrea</creatorcontrib><creatorcontrib>Scuruchi, Michele</creatorcontrib><creatorcontrib>Russo, Sabina</creatorcontrib><creatorcontrib>Avenoso, Angela</creatorcontrib><creatorcontrib>Gerace, Demetrio</creatorcontrib><creatorcontrib>Campo, Giuseppe M.</creatorcontrib><creatorcontrib>Musolino, Caterina</creatorcontrib><title>MiRNome expression is deregulated in the peripheral lymphoid compartment of multiple myeloma</title><title>British journal of haematology</title><addtitle>Br J Haematol</addtitle><description>Summary
MicroRNAs (miRNAs) are short non‐coding RNAs involved in the regulation of gene expression. Selected groups of miRNAs are differentially expressed in various types of cancers. Alterations in miRNAs gene expression have been shown in cells from the B‐cell malignancy, multiple myeloma (MM). However, although MM is a disease of plasma cells, abnormalities have been detected in the peripheral blood of the patients.
The goal of our study was to analyse the entire miRNome in peripheral lymphocytes of MM patients using reverse transcription quantitative polymerase chain reaction. Using in silica analysis, we also evaluated some of the most interesting and significant pathways. Analysis revealed that MM samples had a distinct miRNA profile compared to the controls. This resulted in the identification of 203 miRNAs, 85 of which were over‐expressed and 118 under‐expressed. Of these, 184 possessed validated or highly predicted mRNA targets. We identified 12 354 mRNA targets of the transcriptome: 36·4% of the related proteins are involved in death processes while the 21% are required for growth and cell proliferation. We have demonstrated that miRNAs are differentially expressed in the peripheral blood of MM patients compared to controls, affecting some pathways involved in the anti‐apoptotic process, cell proliferation and maybe anti‐angiogenesis.</description><subject>Biological and medical sciences</subject><subject>cancer</subject><subject>Case-Control Studies</subject><subject>Computational Biology</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Neoplastic</subject><subject>Hematologic and hematopoietic diseases</subject><subject>Humans</subject><subject>Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis</subject><subject>Leukocytes, Mononuclear - metabolism</subject><subject>Leukocytes, Mononuclear - pathology</subject><subject>Lymphocytes - metabolism</subject><subject>Lymphocytes - pathology</subject><subject>lymphoid cells</subject><subject>Medical sciences</subject><subject>microRNAs</subject><subject>MicroRNAs - genetics</subject><subject>Molecular Sequence Annotation</subject><subject>multiple myeloma</subject><subject>Multiple Myeloma - genetics</subject><subject>Multiple Myeloma - metabolism</subject><subject>Multiple Myeloma - pathology</subject><subject>Multiple tumors. Solid tumors. Tumors in childhood (general aspects)</subject><subject>Neoplasm Staging</subject><subject>Reproducibility of Results</subject><subject>Signal Transduction</subject><subject>Transcriptome</subject><subject>Tumors</subject><issn>0007-1048</issn><issn>1365-2141</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqN0E9PFTEUBfDGaOSJLvwCphsTXAz09s-bslSCIkFNCOxIJn3tra-knY7tTOR9ewfeA1cm3s3d_HJOcgh5C-wQ5jta3a4PgWuun5EFiKVqOEh4ThaMsbYBJvUeeVXrLWMgmIKXZI_LJWet4gty8y1cfs8JKd4NBWsNuaehUocFf07RjOho6Om4RjpgCcMai4k0btKwzsFRm9NgypiwH2n2NE1xDENEmjYYczKvyQtvYsU3u79Prj-fXp2cNRc_vnw9-XjRWKG1bqSQzjm7OubOMW-E93LlJW_RO22V9HppmQbpDUMG7thwaI0XFp0yGhxYsU8OtrlDyb8mrGOXQrUYo-kxT7UDJRnny7bV_0EFl5ozKWb6YUttybUW9N1QQjJl0wHr7nfv5t27h91n-24XO60Suif5OPQM3u-AqdZEX0xvQ_3rtBJKaZjd0db9DhE3_27sPp2fbav_AKw1mr8</recordid><startdate>201406</startdate><enddate>201406</enddate><creator>Campo, Salvatore</creator><creator>Allegra, Alessandro</creator><creator>D'Ascola, Angela</creator><creator>Alonci, Andrea</creator><creator>Scuruchi, Michele</creator><creator>Russo, Sabina</creator><creator>Avenoso, Angela</creator><creator>Gerace, Demetrio</creator><creator>Campo, Giuseppe M.</creator><creator>Musolino, Caterina</creator><general>Blackwell</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7T5</scope><scope>H94</scope></search><sort><creationdate>201406</creationdate><title>MiRNome expression is deregulated in the peripheral lymphoid compartment of multiple myeloma</title><author>Campo, Salvatore ; Allegra, Alessandro ; D'Ascola, Angela ; Alonci, Andrea ; Scuruchi, Michele ; Russo, Sabina ; Avenoso, Angela ; Gerace, Demetrio ; Campo, Giuseppe M. ; Musolino, Caterina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3888-434dddcb92dd0fa3ff4bf427efd8c54f86c0814fa0e01d9a217af3ced5a81d1c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Biological and medical sciences</topic><topic>cancer</topic><topic>Case-Control Studies</topic><topic>Computational Biology</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Neoplastic</topic><topic>Hematologic and hematopoietic diseases</topic><topic>Humans</topic><topic>Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis</topic><topic>Leukocytes, Mononuclear - metabolism</topic><topic>Leukocytes, Mononuclear - pathology</topic><topic>Lymphocytes - metabolism</topic><topic>Lymphocytes - pathology</topic><topic>lymphoid cells</topic><topic>Medical sciences</topic><topic>microRNAs</topic><topic>MicroRNAs - genetics</topic><topic>Molecular Sequence Annotation</topic><topic>multiple myeloma</topic><topic>Multiple Myeloma - genetics</topic><topic>Multiple Myeloma - metabolism</topic><topic>Multiple Myeloma - pathology</topic><topic>Multiple tumors. Solid tumors. Tumors in childhood (general aspects)</topic><topic>Neoplasm Staging</topic><topic>Reproducibility of Results</topic><topic>Signal Transduction</topic><topic>Transcriptome</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Campo, Salvatore</creatorcontrib><creatorcontrib>Allegra, Alessandro</creatorcontrib><creatorcontrib>D'Ascola, Angela</creatorcontrib><creatorcontrib>Alonci, Andrea</creatorcontrib><creatorcontrib>Scuruchi, Michele</creatorcontrib><creatorcontrib>Russo, Sabina</creatorcontrib><creatorcontrib>Avenoso, Angela</creatorcontrib><creatorcontrib>Gerace, Demetrio</creatorcontrib><creatorcontrib>Campo, Giuseppe M.</creatorcontrib><creatorcontrib>Musolino, Caterina</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><jtitle>British journal of haematology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Campo, Salvatore</au><au>Allegra, Alessandro</au><au>D'Ascola, Angela</au><au>Alonci, Andrea</au><au>Scuruchi, Michele</au><au>Russo, Sabina</au><au>Avenoso, Angela</au><au>Gerace, Demetrio</au><au>Campo, Giuseppe M.</au><au>Musolino, Caterina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>MiRNome expression is deregulated in the peripheral lymphoid compartment of multiple myeloma</atitle><jtitle>British journal of haematology</jtitle><addtitle>Br J Haematol</addtitle><date>2014-06</date><risdate>2014</risdate><volume>165</volume><issue>6</issue><spage>801</spage><epage>813</epage><pages>801-813</pages><issn>0007-1048</issn><eissn>1365-2141</eissn><coden>BJHEAL</coden><abstract>Summary
MicroRNAs (miRNAs) are short non‐coding RNAs involved in the regulation of gene expression. Selected groups of miRNAs are differentially expressed in various types of cancers. Alterations in miRNAs gene expression have been shown in cells from the B‐cell malignancy, multiple myeloma (MM). However, although MM is a disease of plasma cells, abnormalities have been detected in the peripheral blood of the patients.
The goal of our study was to analyse the entire miRNome in peripheral lymphocytes of MM patients using reverse transcription quantitative polymerase chain reaction. Using in silica analysis, we also evaluated some of the most interesting and significant pathways. Analysis revealed that MM samples had a distinct miRNA profile compared to the controls. This resulted in the identification of 203 miRNAs, 85 of which were over‐expressed and 118 under‐expressed. Of these, 184 possessed validated or highly predicted mRNA targets. We identified 12 354 mRNA targets of the transcriptome: 36·4% of the related proteins are involved in death processes while the 21% are required for growth and cell proliferation. We have demonstrated that miRNAs are differentially expressed in the peripheral blood of MM patients compared to controls, affecting some pathways involved in the anti‐apoptotic process, cell proliferation and maybe anti‐angiogenesis.</abstract><cop>Oxford</cop><pub>Blackwell</pub><pmid>24620752</pmid><doi>10.1111/bjh.12828</doi><tpages>13</tpages></addata></record> |
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subjects | Biological and medical sciences cancer Case-Control Studies Computational Biology Gene Expression Profiling Gene Expression Regulation, Neoplastic Hematologic and hematopoietic diseases Humans Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis Leukocytes, Mononuclear - metabolism Leukocytes, Mononuclear - pathology Lymphocytes - metabolism Lymphocytes - pathology lymphoid cells Medical sciences microRNAs MicroRNAs - genetics Molecular Sequence Annotation multiple myeloma Multiple Myeloma - genetics Multiple Myeloma - metabolism Multiple Myeloma - pathology Multiple tumors. Solid tumors. Tumors in childhood (general aspects) Neoplasm Staging Reproducibility of Results Signal Transduction Transcriptome Tumors |
title | MiRNome expression is deregulated in the peripheral lymphoid compartment of multiple myeloma |
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