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Acetylcholine-metabolizing butyrylcholinesterase ( BCHE ) copy number and single nucleotide polymorphisms and their role in attention-deficit/hyperactivity syndrome
Abstract A previous genome-wide screen for copy number variations (CNVs) in attention deficit/hyperactivity disorder (ADHD) revealed a de novo chromosome 3q26.1 deletion in one of the patients. Candidate genes at this locus include the acetylcholine-metabolizing butyrylcholinesterase (BCHE) expressi...
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Published in: | Journal of psychiatric research 2013-12, Vol.47 (12), p.1902-1908 |
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description | Abstract A previous genome-wide screen for copy number variations (CNVs) in attention deficit/hyperactivity disorder (ADHD) revealed a de novo chromosome 3q26.1 deletion in one of the patients. Candidate genes at this locus include the acetylcholine-metabolizing butyrylcholinesterase (BCHE) expressing gene (OMIM # 177400 ), which is of particular interest. The present study investigates the hypothesis that the heterozygous deletion of the BCHE gene is associated with adult ADHD (aADHD). Ina first step, we screened 348 aADHD patients and 352 controls for stretches of loss of heterozygosity (LOH) across the entire BCHE gene to screen for the deletion. Our second aim was to clarify whether BCHE single nucleotide polymorphisms (SNPs) themselves influence the risk towards ADHD. Putative functional consequences of associated SNPs as well as their un-typed proxies were predicted by several bioinformatic tools. 96 individuals displayed entirely homozygous genotype reads in all 12examined SNPs, making them possible candidates to harbor a heterozygous BCHE deletion. DNA from these 96 probands was further analyzed by real-time PCR using a BCHE -specific CNV assay. However, no deletion was found. Of the 12 tag SNPs that passed inclusion criteria, rs4680612 and rs829508were significantly associated with aADHD, as their minor alleles occurred more often in cases than in controls ( p = 0.018 and p = 0.039, respectively). The risk variant rs4680612 is located in the transcriptional control region of the gene and predicted to disrupt a binding site for MYT-1, which has previously been associated with mental disorders. However, when examining a second independent adult ADHD sample of 353 cases, the association did not replicate. When looking up the deletion in three genome-wide screens for CNV in ADHD and combining it with the present study, it became apparent that 3 from a total of 1030 ADHD patients, but none of 5787 controls, featured a deletion of the BCHE promoter region including rs4680612 ( p = 0.00004). Taken together, there are several lines of evidence suggesting a potential involvement of BCHE in the etiopathology of ADHD, as a rare hemizygous deletion as well as a common SNP in the same region are associated with disease, although with different penetrance. Both variations result in the disruption of the binding site of the transcription factor MYT-1 suggesting epistatic effects of BCHE and MYT-1 in the pathogenesis of ADHD. As we were not able to replicate t |
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Candidate genes at this locus include the acetylcholine-metabolizing butyrylcholinesterase (BCHE) expressing gene (OMIM # 177400 ), which is of particular interest. The present study investigates the hypothesis that the heterozygous deletion of the BCHE gene is associated with adult ADHD (aADHD). Ina first step, we screened 348 aADHD patients and 352 controls for stretches of loss of heterozygosity (LOH) across the entire BCHE gene to screen for the deletion. Our second aim was to clarify whether BCHE single nucleotide polymorphisms (SNPs) themselves influence the risk towards ADHD. Putative functional consequences of associated SNPs as well as their un-typed proxies were predicted by several bioinformatic tools. 96 individuals displayed entirely homozygous genotype reads in all 12examined SNPs, making them possible candidates to harbor a heterozygous BCHE deletion. DNA from these 96 probands was further analyzed by real-time PCR using a BCHE -specific CNV assay. However, no deletion was found. Of the 12 tag SNPs that passed inclusion criteria, rs4680612 and rs829508were significantly associated with aADHD, as their minor alleles occurred more often in cases than in controls ( p = 0.018 and p = 0.039, respectively). The risk variant rs4680612 is located in the transcriptional control region of the gene and predicted to disrupt a binding site for MYT-1, which has previously been associated with mental disorders. However, when examining a second independent adult ADHD sample of 353 cases, the association did not replicate. When looking up the deletion in three genome-wide screens for CNV in ADHD and combining it with the present study, it became apparent that 3 from a total of 1030 ADHD patients, but none of 5787 controls, featured a deletion of the BCHE promoter region including rs4680612 ( p = 0.00004). Taken together, there are several lines of evidence suggesting a potential involvement of BCHE in the etiopathology of ADHD, as a rare hemizygous deletion as well as a common SNP in the same region are associated with disease, although with different penetrance. Both variations result in the disruption of the binding site of the transcription factor MYT-1 suggesting epistatic effects of BCHE and MYT-1 in the pathogenesis of ADHD. As we were not able to replicate the SNP association, our findings should be considered preliminary and call for larger studies in extended phenotypes.</description><identifier>ISSN: 0022-3956</identifier><identifier>EISSN: 1879-1379</identifier><identifier>DOI: 10.1016/j.jpsychires.2013.08.006</identifier><identifier>PMID: 24041656</identifier><identifier>CODEN: JPYRA3</identifier><language>eng</language><publisher>Kidlington: Elsevier Ltd</publisher><subject>ADHD ; Adult ; Alleles ; Attention Deficit Disorder with Hyperactivity - genetics ; Attention deficit disorders. Hyperactivity ; Attention deficit hyperactivity disorder ; Biological and medical sciences ; Biometry ; Butyrylcholinesterase - genetics ; Candidates ; Child clinical studies ; CNV ; Copy number variation ; Deletion ; DNA Copy Number Variations - genetics ; Epistasis ; Female ; Gene Frequency ; Genes ; Genetic Predisposition to Disease ; Genome-Wide Association Study ; Genotype ; Humans ; Male ; Medical sciences ; Middle Aged ; MYT-1 ; Phenotypes ; Polymorphism, Single Nucleotide - genetics ; Psychiatric disorders ; Psychiatry ; Psychology. Psychoanalysis. Psychiatry ; Psychopathology. Psychiatry ; Young Adult</subject><ispartof>Journal of psychiatric research, 2013-12, Vol.47 (12), p.1902-1908</ispartof><rights>Elsevier Ltd</rights><rights>2013 Elsevier Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2013 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c558t-918d4a2022e52ad78cca1831e5b8874418ab2cebcb47fa8c3df083ca65ce91863</citedby><cites>FETCH-LOGICAL-c558t-918d4a2022e52ad78cca1831e5b8874418ab2cebcb47fa8c3df083ca65ce91863</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902,30977</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=27888215$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24041656$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jacob, Christian P</creatorcontrib><creatorcontrib>Weber, Heike</creatorcontrib><creatorcontrib>Retz, Wolfgang</creatorcontrib><creatorcontrib>Kittel-Schneider, Sarah</creatorcontrib><creatorcontrib>Heupel, Julia</creatorcontrib><creatorcontrib>Renner, Tobias</creatorcontrib><creatorcontrib>Lesch, Klaus-Peter</creatorcontrib><creatorcontrib>Reif, Andreas</creatorcontrib><title>Acetylcholine-metabolizing butyrylcholinesterase ( BCHE ) copy number and single nucleotide polymorphisms and their role in attention-deficit/hyperactivity syndrome</title><title>Journal of psychiatric research</title><addtitle>J Psychiatr Res</addtitle><description>Abstract A previous genome-wide screen for copy number variations (CNVs) in attention deficit/hyperactivity disorder (ADHD) revealed a de novo chromosome 3q26.1 deletion in one of the patients. Candidate genes at this locus include the acetylcholine-metabolizing butyrylcholinesterase (BCHE) expressing gene (OMIM # 177400 ), which is of particular interest. The present study investigates the hypothesis that the heterozygous deletion of the BCHE gene is associated with adult ADHD (aADHD). Ina first step, we screened 348 aADHD patients and 352 controls for stretches of loss of heterozygosity (LOH) across the entire BCHE gene to screen for the deletion. Our second aim was to clarify whether BCHE single nucleotide polymorphisms (SNPs) themselves influence the risk towards ADHD. Putative functional consequences of associated SNPs as well as their un-typed proxies were predicted by several bioinformatic tools. 96 individuals displayed entirely homozygous genotype reads in all 12examined SNPs, making them possible candidates to harbor a heterozygous BCHE deletion. DNA from these 96 probands was further analyzed by real-time PCR using a BCHE -specific CNV assay. However, no deletion was found. Of the 12 tag SNPs that passed inclusion criteria, rs4680612 and rs829508were significantly associated with aADHD, as their minor alleles occurred more often in cases than in controls ( p = 0.018 and p = 0.039, respectively). The risk variant rs4680612 is located in the transcriptional control region of the gene and predicted to disrupt a binding site for MYT-1, which has previously been associated with mental disorders. However, when examining a second independent adult ADHD sample of 353 cases, the association did not replicate. When looking up the deletion in three genome-wide screens for CNV in ADHD and combining it with the present study, it became apparent that 3 from a total of 1030 ADHD patients, but none of 5787 controls, featured a deletion of the BCHE promoter region including rs4680612 ( p = 0.00004). Taken together, there are several lines of evidence suggesting a potential involvement of BCHE in the etiopathology of ADHD, as a rare hemizygous deletion as well as a common SNP in the same region are associated with disease, although with different penetrance. Both variations result in the disruption of the binding site of the transcription factor MYT-1 suggesting epistatic effects of BCHE and MYT-1 in the pathogenesis of ADHD. As we were not able to replicate the SNP association, our findings should be considered preliminary and call for larger studies in extended phenotypes.</description><subject>ADHD</subject><subject>Adult</subject><subject>Alleles</subject><subject>Attention Deficit Disorder with Hyperactivity - genetics</subject><subject>Attention deficit disorders. Hyperactivity</subject><subject>Attention deficit hyperactivity disorder</subject><subject>Biological and medical sciences</subject><subject>Biometry</subject><subject>Butyrylcholinesterase - genetics</subject><subject>Candidates</subject><subject>Child clinical studies</subject><subject>CNV</subject><subject>Copy number variation</subject><subject>Deletion</subject><subject>DNA Copy Number Variations - genetics</subject><subject>Epistasis</subject><subject>Female</subject><subject>Gene Frequency</subject><subject>Genes</subject><subject>Genetic Predisposition to Disease</subject><subject>Genome-Wide Association Study</subject><subject>Genotype</subject><subject>Humans</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>MYT-1</subject><subject>Phenotypes</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Psychiatric disorders</subject><subject>Psychiatry</subject><subject>Psychology. Psychoanalysis. Psychiatry</subject><subject>Psychopathology. Psychiatry</subject><subject>Young Adult</subject><issn>0022-3956</issn><issn>1879-1379</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>7QJ</sourceid><recordid>eNqNksFu1DAQQCMEomXhF5AvSOWQre04iXNBaleFIlXiAJwtZzJhvSR2sJ1K4Xv4ULzs0kpc2JMt-43HM_OyjDC6ZpRVl7v1bgoLbI3HsOaUFWsq15RWT7JzJusmZ0XdPM3OKeU8L5qyOstehLCjlNaciefZGRdUsKqszrNfV4BxGWDrBmMxHzHqNm1_GvuNtHNc_MNdiOh1QHJBrje3N-QtATctxM5ji55o25GQYgZMJzCgi6ZDMrlhGZ2ftiaM4Q8Tt2g88S5xxhIdI9ponM077A2YeLldppQFork3cSFhsZ13I77MnvV6CPjquK6yr-9vvmxu87tPHz5uru5yKEsZ84bJTmieisaS666WAJrJgmHZSlkLwaRuOWALrah7LaHoeioL0FUJmGKrYpVdHN6dvPsxp4rVaALgMGiLbg6KlYI1UjQVOwEthGQFrcUJKKtqIdOw_o8KUcm6TAokVB5Q8C4Ej72avBm1XxSjai-J2qlHSdReEkWlSpKk0NfHLHM7YvcQ-NeKBLw5AjqAHnqvLZjwyNVSSp4qXGXXBw7TUO4NehXAoAXsUk6IqnPmlN-8--cRSLqZlPc7Lhh2bvY2DV0xFbii6vNe6r3TqbmUl6m_vwEB7PhT</recordid><startdate>20131201</startdate><enddate>20131201</enddate><creator>Jacob, Christian P</creator><creator>Weber, Heike</creator><creator>Retz, Wolfgang</creator><creator>Kittel-Schneider, Sarah</creator><creator>Heupel, Julia</creator><creator>Renner, Tobias</creator><creator>Lesch, Klaus-Peter</creator><creator>Reif, Andreas</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TK</scope><scope>7TM</scope><scope>7QJ</scope></search><sort><creationdate>20131201</creationdate><title>Acetylcholine-metabolizing butyrylcholinesterase ( BCHE ) copy number and single nucleotide polymorphisms and their role in attention-deficit/hyperactivity syndrome</title><author>Jacob, Christian P ; Weber, Heike ; Retz, Wolfgang ; Kittel-Schneider, Sarah ; Heupel, Julia ; Renner, Tobias ; Lesch, Klaus-Peter ; Reif, Andreas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c558t-918d4a2022e52ad78cca1831e5b8874418ab2cebcb47fa8c3df083ca65ce91863</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>ADHD</topic><topic>Adult</topic><topic>Alleles</topic><topic>Attention Deficit Disorder with Hyperactivity - genetics</topic><topic>Attention deficit disorders. Hyperactivity</topic><topic>Attention deficit hyperactivity disorder</topic><topic>Biological and medical sciences</topic><topic>Biometry</topic><topic>Butyrylcholinesterase - genetics</topic><topic>Candidates</topic><topic>Child clinical studies</topic><topic>CNV</topic><topic>Copy number variation</topic><topic>Deletion</topic><topic>DNA Copy Number Variations - genetics</topic><topic>Epistasis</topic><topic>Female</topic><topic>Gene Frequency</topic><topic>Genes</topic><topic>Genetic Predisposition to Disease</topic><topic>Genome-Wide Association Study</topic><topic>Genotype</topic><topic>Humans</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>MYT-1</topic><topic>Phenotypes</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Psychiatric disorders</topic><topic>Psychiatry</topic><topic>Psychology. Psychoanalysis. Psychiatry</topic><topic>Psychopathology. Psychiatry</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jacob, Christian P</creatorcontrib><creatorcontrib>Weber, Heike</creatorcontrib><creatorcontrib>Retz, Wolfgang</creatorcontrib><creatorcontrib>Kittel-Schneider, Sarah</creatorcontrib><creatorcontrib>Heupel, Julia</creatorcontrib><creatorcontrib>Renner, Tobias</creatorcontrib><creatorcontrib>Lesch, Klaus-Peter</creatorcontrib><creatorcontrib>Reif, Andreas</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Applied Social Sciences Index & Abstracts (ASSIA)</collection><jtitle>Journal of psychiatric research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jacob, Christian P</au><au>Weber, Heike</au><au>Retz, Wolfgang</au><au>Kittel-Schneider, Sarah</au><au>Heupel, Julia</au><au>Renner, Tobias</au><au>Lesch, Klaus-Peter</au><au>Reif, Andreas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Acetylcholine-metabolizing butyrylcholinesterase ( BCHE ) copy number and single nucleotide polymorphisms and their role in attention-deficit/hyperactivity syndrome</atitle><jtitle>Journal of psychiatric research</jtitle><addtitle>J Psychiatr Res</addtitle><date>2013-12-01</date><risdate>2013</risdate><volume>47</volume><issue>12</issue><spage>1902</spage><epage>1908</epage><pages>1902-1908</pages><issn>0022-3956</issn><eissn>1879-1379</eissn><coden>JPYRA3</coden><abstract>Abstract A previous genome-wide screen for copy number variations (CNVs) in attention deficit/hyperactivity disorder (ADHD) revealed a de novo chromosome 3q26.1 deletion in one of the patients. Candidate genes at this locus include the acetylcholine-metabolizing butyrylcholinesterase (BCHE) expressing gene (OMIM # 177400 ), which is of particular interest. The present study investigates the hypothesis that the heterozygous deletion of the BCHE gene is associated with adult ADHD (aADHD). Ina first step, we screened 348 aADHD patients and 352 controls for stretches of loss of heterozygosity (LOH) across the entire BCHE gene to screen for the deletion. Our second aim was to clarify whether BCHE single nucleotide polymorphisms (SNPs) themselves influence the risk towards ADHD. Putative functional consequences of associated SNPs as well as their un-typed proxies were predicted by several bioinformatic tools. 96 individuals displayed entirely homozygous genotype reads in all 12examined SNPs, making them possible candidates to harbor a heterozygous BCHE deletion. DNA from these 96 probands was further analyzed by real-time PCR using a BCHE -specific CNV assay. However, no deletion was found. Of the 12 tag SNPs that passed inclusion criteria, rs4680612 and rs829508were significantly associated with aADHD, as their minor alleles occurred more often in cases than in controls ( p = 0.018 and p = 0.039, respectively). The risk variant rs4680612 is located in the transcriptional control region of the gene and predicted to disrupt a binding site for MYT-1, which has previously been associated with mental disorders. However, when examining a second independent adult ADHD sample of 353 cases, the association did not replicate. When looking up the deletion in three genome-wide screens for CNV in ADHD and combining it with the present study, it became apparent that 3 from a total of 1030 ADHD patients, but none of 5787 controls, featured a deletion of the BCHE promoter region including rs4680612 ( p = 0.00004). Taken together, there are several lines of evidence suggesting a potential involvement of BCHE in the etiopathology of ADHD, as a rare hemizygous deletion as well as a common SNP in the same region are associated with disease, although with different penetrance. Both variations result in the disruption of the binding site of the transcription factor MYT-1 suggesting epistatic effects of BCHE and MYT-1 in the pathogenesis of ADHD. As we were not able to replicate the SNP association, our findings should be considered preliminary and call for larger studies in extended phenotypes.</abstract><cop>Kidlington</cop><pub>Elsevier Ltd</pub><pmid>24041656</pmid><doi>10.1016/j.jpsychires.2013.08.006</doi><tpages>7</tpages></addata></record> |
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subjects | ADHD Adult Alleles Attention Deficit Disorder with Hyperactivity - genetics Attention deficit disorders. Hyperactivity Attention deficit hyperactivity disorder Biological and medical sciences Biometry Butyrylcholinesterase - genetics Candidates Child clinical studies CNV Copy number variation Deletion DNA Copy Number Variations - genetics Epistasis Female Gene Frequency Genes Genetic Predisposition to Disease Genome-Wide Association Study Genotype Humans Male Medical sciences Middle Aged MYT-1 Phenotypes Polymorphism, Single Nucleotide - genetics Psychiatric disorders Psychiatry Psychology. Psychoanalysis. Psychiatry Psychopathology. Psychiatry Young Adult |
title | Acetylcholine-metabolizing butyrylcholinesterase ( BCHE ) copy number and single nucleotide polymorphisms and their role in attention-deficit/hyperactivity syndrome |
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