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effect of spatially marginal localities in modelling species niches and distributions

AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM...

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Published in:Journal of biogeography 2014-07, Vol.41 (7), p.1390-1401
Main Authors: Soley‐Guardia, Mariano, Radosavljevic, Aleksandar, Rivera, Jhanine L, Anderson, Robert P, Araújo, Miguel
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creator Soley‐Guardia, Mariano
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description AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs.
doi_str_mv 10.1111/jbi.12297
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LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. 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Techniques ; geographical distribution ; Geography ; Habitats ; Heteromys anomalus ; MaxEnt ; Metapopulation ecology ; Methodological matters ; Methods and techniques (sampling, tagging, trapping, modelling...) ; mice ; Mosaic ; niches ; north-western South America ; prediction ; range ; savannas ; shrublands ; Spatial models ; spatially marginal ; species distribution model ; Synecology ; tropical forests</subject><ispartof>Journal of biogeography, 2014-07, Vol.41 (7), p.1390-1401</ispartof><rights>Copyright © 2014 John Wiley &amp; Sons Ltd.</rights><rights>2014 John Wiley &amp; Sons Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2014 John Wiley &amp; Sons Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4447-c7c10ea11f765fa7e0f322f77b9f6e7612c26698cb16d4cfff7084370ad180b3</citedby><cites>FETCH-LOGICAL-c4447-c7c10ea11f765fa7e0f322f77b9f6e7612c26698cb16d4cfff7084370ad180b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/24035289$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/24035289$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,58236,58469</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=28551762$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><contributor>Araújo, Miguel</contributor><contributor>Araújo, Miguel</contributor><creatorcontrib>Soley‐Guardia, Mariano</creatorcontrib><creatorcontrib>Radosavljevic, Aleksandar</creatorcontrib><creatorcontrib>Rivera, Jhanine L</creatorcontrib><creatorcontrib>Anderson, Robert P</creatorcontrib><creatorcontrib>Araújo, Miguel</creatorcontrib><title>effect of spatially marginal localities in modelling species niches and distributions</title><title>Journal of biogeography</title><addtitle>J. Biogeogr</addtitle><description>AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. 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Psychology</topic><topic>General aspects</topic><topic>General aspects. Techniques</topic><topic>geographical distribution</topic><topic>Geography</topic><topic>Habitats</topic><topic>Heteromys anomalus</topic><topic>MaxEnt</topic><topic>Metapopulation ecology</topic><topic>Methodological matters</topic><topic>Methods and techniques (sampling, tagging, trapping, modelling...)</topic><topic>mice</topic><topic>Mosaic</topic><topic>niches</topic><topic>north-western South America</topic><topic>prediction</topic><topic>range</topic><topic>savannas</topic><topic>shrublands</topic><topic>Spatial models</topic><topic>spatially marginal</topic><topic>species distribution model</topic><topic>Synecology</topic><topic>tropical forests</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Soley‐Guardia, Mariano</creatorcontrib><creatorcontrib>Radosavljevic, Aleksandar</creatorcontrib><creatorcontrib>Rivera, Jhanine L</creatorcontrib><creatorcontrib>Anderson, Robert P</creatorcontrib><creatorcontrib>Araújo, Miguel</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Journal of biogeography</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Soley‐Guardia, Mariano</au><au>Radosavljevic, Aleksandar</au><au>Rivera, Jhanine L</au><au>Anderson, Robert P</au><au>Araújo, Miguel</au><au>Araújo, Miguel</au><au>Araújo, Miguel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>effect of spatially marginal localities in modelling species niches and distributions</atitle><jtitle>Journal of biogeography</jtitle><addtitle>J. Biogeogr</addtitle><date>2014-07</date><risdate>2014</risdate><volume>41</volume><issue>7</issue><spage>1390</spage><epage>1401</epage><pages>1390-1401</pages><issn>0305-0270</issn><eissn>1365-2699</eissn><coden>JBIODN</coden><abstract>AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs.</abstract><cop>Oxford</cop><pub>Blackwell Scientific Publications</pub><doi>10.1111/jbi.12297</doi><tpages>12</tpages></addata></record>
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ispartof Journal of biogeography, 2014-07, Vol.41 (7), p.1390-1401
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source Wiley; JSTOR Archival Journals and Primary Sources Collection【Remote access available】
subjects Animal and plant ecology
Animal, plant and microbial ecology
Biogeography
Biological and medical sciences
Distribution
Ecological genetics
Ecological modeling
ecological niche model
Ecological niches
environmentally marginal
Forest habitats
Fundamental and applied biological sciences. Psychology
General aspects
General aspects. Techniques
geographical distribution
Geography
Habitats
Heteromys anomalus
MaxEnt
Metapopulation ecology
Methodological matters
Methods and techniques (sampling, tagging, trapping, modelling...)
mice
Mosaic
niches
north-western South America
prediction
range
savannas
shrublands
Spatial models
spatially marginal
species distribution model
Synecology
tropical forests
title effect of spatially marginal localities in modelling species niches and distributions
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