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effect of spatially marginal localities in modelling species niches and distributions
AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM...
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Published in: | Journal of biogeography 2014-07, Vol.41 (7), p.1390-1401 |
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creator | Soley‐Guardia, Mariano Radosavljevic, Aleksandar Rivera, Jhanine L Anderson, Robert P Araújo, Miguel |
description | AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs. |
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LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs.</description><identifier>ISSN: 0305-0270</identifier><identifier>EISSN: 1365-2699</identifier><identifier>DOI: 10.1111/jbi.12297</identifier><identifier>CODEN: JBIODN</identifier><language>eng</language><publisher>Oxford: Blackwell Scientific Publications</publisher><subject>Animal and plant ecology ; Animal, plant and microbial ecology ; Biogeography ; Biological and medical sciences ; Distribution ; Ecological genetics ; Ecological modeling ; ecological niche model ; Ecological niches ; environmentally marginal ; Forest habitats ; Fundamental and applied biological sciences. Psychology ; General aspects ; General aspects. Techniques ; geographical distribution ; Geography ; Habitats ; Heteromys anomalus ; MaxEnt ; Metapopulation ecology ; Methodological matters ; Methods and techniques (sampling, tagging, trapping, modelling...) ; mice ; Mosaic ; niches ; north-western South America ; prediction ; range ; savannas ; shrublands ; Spatial models ; spatially marginal ; species distribution model ; Synecology ; tropical forests</subject><ispartof>Journal of biogeography, 2014-07, Vol.41 (7), p.1390-1401</ispartof><rights>Copyright © 2014 John Wiley & Sons Ltd.</rights><rights>2014 John Wiley & Sons Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2014 John Wiley & Sons Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4447-c7c10ea11f765fa7e0f322f77b9f6e7612c26698cb16d4cfff7084370ad180b3</citedby><cites>FETCH-LOGICAL-c4447-c7c10ea11f765fa7e0f322f77b9f6e7612c26698cb16d4cfff7084370ad180b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/24035289$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/24035289$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,58236,58469</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28551762$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><contributor>Araújo, Miguel</contributor><contributor>Araújo, Miguel</contributor><creatorcontrib>Soley‐Guardia, Mariano</creatorcontrib><creatorcontrib>Radosavljevic, Aleksandar</creatorcontrib><creatorcontrib>Rivera, Jhanine L</creatorcontrib><creatorcontrib>Anderson, Robert P</creatorcontrib><creatorcontrib>Araújo, Miguel</creatorcontrib><title>effect of spatially marginal localities in modelling species niches and distributions</title><title>Journal of biogeography</title><addtitle>J. Biogeogr</addtitle><description>AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs.</description><subject>Animal and plant ecology</subject><subject>Animal, plant and microbial ecology</subject><subject>Biogeography</subject><subject>Biological and medical sciences</subject><subject>Distribution</subject><subject>Ecological genetics</subject><subject>Ecological modeling</subject><subject>ecological niche model</subject><subject>Ecological niches</subject><subject>environmentally marginal</subject><subject>Forest habitats</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General aspects</subject><subject>General aspects. Techniques</subject><subject>geographical distribution</subject><subject>Geography</subject><subject>Habitats</subject><subject>Heteromys anomalus</subject><subject>MaxEnt</subject><subject>Metapopulation ecology</subject><subject>Methodological matters</subject><subject>Methods and techniques (sampling, tagging, trapping, modelling...)</subject><subject>mice</subject><subject>Mosaic</subject><subject>niches</subject><subject>north-western South America</subject><subject>prediction</subject><subject>range</subject><subject>savannas</subject><subject>shrublands</subject><subject>Spatial models</subject><subject>spatially marginal</subject><subject>species distribution model</subject><subject>Synecology</subject><subject>tropical forests</subject><issn>0305-0270</issn><issn>1365-2699</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNp1kN9rFDEQx4MoeJ4--AeICyLow7aT37ePbbW1WupDWwq-hGw2OXPubc5kD73_3jm3VhDMy0DmM19mPoQ8p3BA8R2u2nhAGWv0AzKjXMmaqaZ5SGbAQdbANDwmT0pZAUAjuZiRGx-Cd2OVQlU2doy273fV2uZlHGxf9cnZPo7RlyoO1Tp1vu_jsETUu_3nEN1XLHboqi6WMcd2O8Y0lKfkUbB98c_u6pxcn76_PvlQX3w-Oz85uqidEELXTjsK3lIatJLBag-BMxa0bpugvFaUOaZUs3AtVZ1wIQQNC8E12I4uoOVz8maK3eT0fevLaNaxONzRDj5ti6FSCADNgSL66h90lbYZb9xTXDImBQqZk7cT5XIqJftgNjmijZ2hYPZ-Dfo1v_0i-_ou0Ra0FLIdXCz3A2whJdWKIXc4cT9i73f_DzQfj8__JL-YJlZlTPlvogBcdNFgv576qNz_vO_b_M0ozbU0t5dn5vL205erd6fHRiH_cuKDTcYuM255c8WAohsq8XTBfwGYlaq9</recordid><startdate>201407</startdate><enddate>201407</enddate><creator>Soley‐Guardia, Mariano</creator><creator>Radosavljevic, Aleksandar</creator><creator>Rivera, Jhanine L</creator><creator>Anderson, Robert P</creator><creator>Araújo, Miguel</creator><general>Blackwell Scientific Publications</general><general>Blackwell Publishing Ltd</general><general>John Wiley & Sons Ltd</general><general>Blackwell</general><general>Wiley Subscription Services, Inc</general><scope>FBQ</scope><scope>BSCLL</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7SS</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>201407</creationdate><title>effect of spatially marginal localities in modelling species niches and distributions</title><author>Soley‐Guardia, Mariano ; Radosavljevic, Aleksandar ; Rivera, Jhanine L ; Anderson, Robert P ; Araújo, Miguel</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4447-c7c10ea11f765fa7e0f322f77b9f6e7612c26698cb16d4cfff7084370ad180b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animal and plant ecology</topic><topic>Animal, plant and microbial ecology</topic><topic>Biogeography</topic><topic>Biological and medical sciences</topic><topic>Distribution</topic><topic>Ecological genetics</topic><topic>Ecological modeling</topic><topic>ecological niche model</topic><topic>Ecological niches</topic><topic>environmentally marginal</topic><topic>Forest habitats</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General aspects</topic><topic>General aspects. Techniques</topic><topic>geographical distribution</topic><topic>Geography</topic><topic>Habitats</topic><topic>Heteromys anomalus</topic><topic>MaxEnt</topic><topic>Metapopulation ecology</topic><topic>Methodological matters</topic><topic>Methods and techniques (sampling, tagging, trapping, modelling...)</topic><topic>mice</topic><topic>Mosaic</topic><topic>niches</topic><topic>north-western South America</topic><topic>prediction</topic><topic>range</topic><topic>savannas</topic><topic>shrublands</topic><topic>Spatial models</topic><topic>spatially marginal</topic><topic>species distribution model</topic><topic>Synecology</topic><topic>tropical forests</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Soley‐Guardia, Mariano</creatorcontrib><creatorcontrib>Radosavljevic, Aleksandar</creatorcontrib><creatorcontrib>Rivera, Jhanine L</creatorcontrib><creatorcontrib>Anderson, Robert P</creatorcontrib><creatorcontrib>Araújo, Miguel</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Journal of biogeography</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Soley‐Guardia, Mariano</au><au>Radosavljevic, Aleksandar</au><au>Rivera, Jhanine L</au><au>Anderson, Robert P</au><au>Araújo, Miguel</au><au>Araújo, Miguel</au><au>Araújo, Miguel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>effect of spatially marginal localities in modelling species niches and distributions</atitle><jtitle>Journal of biogeography</jtitle><addtitle>J. Biogeogr</addtitle><date>2014-07</date><risdate>2014</risdate><volume>41</volume><issue>7</issue><spage>1390</spage><epage>1401</epage><pages>1390-1401</pages><issn>0305-0270</issn><eissn>1365-2699</eissn><coden>JBIODN</coden><abstract>AIM: We introduce and evaluate the potential effect of spatially marginal localities (specifically those protruding into unsuitable regions), in overestimating species niches and distributions when using ecological niche models (ENMs). LOCATION: North‐western South America. METHODS: We built an ENM for the Caribbean spiny pocket mouse (Heteromys anomalus) using MaxEnt and climatic variables. This species typically inhabits extensive tropical forests but can also range into drier habitats through patches of mesic vegetation. We ranked occurrence records according to the suitability value they received, and retrieved habitat information from collectors' field notes and the literature to determine whether those receiving lower values correspond to spatially marginal localities protruding into unsuitable regions. We then built a model excluding a subset of such localities and compared its geographic and environmental prediction with that of the original model. RESULTS: Models differed substantially in their estimates of suitability. The original model resulted in an overly extensive prediction, considering as suitable hot and dry regions dominated by xerophytic vegetation. Records receiving the lowest suitability values in this model corresponded mainly to captures in patches of mesic forest surrounded by thorn scrub or savannas. The model calibrated without such records restricted suitability mostly to regions characterized by the typical habitat of the species. MAIN CONCLUSIONS: When it is not possible to use variables that are more proximal or have finer resolutions, we recommend building complementary models that, together, can provide a more realistic estimate of the species' niche and corresponding geographic distribution. Jointly interpreting these models, researchers may better differentiate between areas harbouring typical habitat and those where the species can be found only if locally favourable conditions exist. Such a distinction is of relevance for a wide range of applications relying on inferences obtained from ENMs.</abstract><cop>Oxford</cop><pub>Blackwell Scientific Publications</pub><doi>10.1111/jbi.12297</doi><tpages>12</tpages></addata></record> |
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subjects | Animal and plant ecology Animal, plant and microbial ecology Biogeography Biological and medical sciences Distribution Ecological genetics Ecological modeling ecological niche model Ecological niches environmentally marginal Forest habitats Fundamental and applied biological sciences. Psychology General aspects General aspects. Techniques geographical distribution Geography Habitats Heteromys anomalus MaxEnt Metapopulation ecology Methodological matters Methods and techniques (sampling, tagging, trapping, modelling...) mice Mosaic niches north-western South America prediction range savannas shrublands Spatial models spatially marginal species distribution model Synecology tropical forests |
title | effect of spatially marginal localities in modelling species niches and distributions |
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