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Non-bacterial etiologies of diarrheal diseases in Afghanistan
Background Microbial diarrheal diseases are one of the leading causes of child morbidity and mortality in developing countries. This study aimed to identify the main causes of non-bacterial diarrhea in Afghanistan. Methods A total of 699 stools were collected from children aged under 5 years who pre...
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Published in: | Transactions of the Royal Society of Tropical Medicine and Hygiene 2014-08, Vol.108 (8), p.461-465 |
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container_title | Transactions of the Royal Society of Tropical Medicine and Hygiene |
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creator | Elyan, Diaa Wasfy, Momtaz El Mohammady, Hanan Hassan, Khaled Monestersky, Jesse Noormal, Bashir Oyofo, Buhari |
description | Background
Microbial diarrheal diseases are one of the leading causes of child morbidity and mortality in developing countries. This study aimed to identify the main causes of non-bacterial diarrhea in Afghanistan.
Methods
A total of 699 stools were collected from children aged under 5 years who presented with diarrhea at Indira Gandhi and Kandahar hospitals. Frozen aliquots were preserved for screening against rotavirus, astrovirus, adenovirus, norovirus, Cryptosporidium and Giardia, when bacterial cultures tested negative. Tests were performed at the hospitals after laboratory staff were trained and provided with enzyme-immunoassays and equipment. Results were confirmed at the U.S. Naval Medical Research Unit No. 3, Cairo, Egypt.
Results
Of the samples tested, 71.9% (503/699) were infected with one or more pathogens. However, the majority (85.8%; 432/503) showed single infections: rotavirus (72.2%; 329/432), Cryptosporidium (14.1%; 61/432), Giardia (5.1%; 22/432), astrovirus (2.3%; 10/432), adenovirus (1.6%; 7/432) and norovirus (0.7%; 3/432). The remaining 14% (71/503) showed mixed infections of the tested pathogens.
Conclusions
Non-bacterial pathogens were identified that could enable health officials to adopt more effective treatment and control measures for diarrhea in Afghanistan. |
doi_str_mv | 10.1093/trstmh/tru096 |
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Microbial diarrheal diseases are one of the leading causes of child morbidity and mortality in developing countries. This study aimed to identify the main causes of non-bacterial diarrhea in Afghanistan.
Methods
A total of 699 stools were collected from children aged under 5 years who presented with diarrhea at Indira Gandhi and Kandahar hospitals. Frozen aliquots were preserved for screening against rotavirus, astrovirus, adenovirus, norovirus, Cryptosporidium and Giardia, when bacterial cultures tested negative. Tests were performed at the hospitals after laboratory staff were trained and provided with enzyme-immunoassays and equipment. Results were confirmed at the U.S. Naval Medical Research Unit No. 3, Cairo, Egypt.
Results
Of the samples tested, 71.9% (503/699) were infected with one or more pathogens. However, the majority (85.8%; 432/503) showed single infections: rotavirus (72.2%; 329/432), Cryptosporidium (14.1%; 61/432), Giardia (5.1%; 22/432), astrovirus (2.3%; 10/432), adenovirus (1.6%; 7/432) and norovirus (0.7%; 3/432). The remaining 14% (71/503) showed mixed infections of the tested pathogens.
Conclusions
Non-bacterial pathogens were identified that could enable health officials to adopt more effective treatment and control measures for diarrhea in Afghanistan.</description><identifier>ISSN: 0035-9203</identifier><identifier>EISSN: 1878-3503</identifier><identifier>DOI: 10.1093/trstmh/tru096</identifier><identifier>PMID: 24942900</identifier><identifier>CODEN: TRSTAZ</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>Adenoviridae Infections - epidemiology ; Afghanistan - epidemiology ; Astroviridae Infections - epidemiology ; Biological and medical sciences ; Caliciviridae Infections - epidemiology ; Child, Preschool ; Cryptosporidiosis - epidemiology ; Diarrhea - parasitology ; Diarrhea - virology ; Feces - parasitology ; Feces - virology ; Female ; Gastroenterology. Liver. Pancreas. Abdomen ; General aspects ; Giardiasis - epidemiology ; Humans ; Infant ; Infant, Newborn ; Male ; Medical sciences ; Other diseases. Semiology ; Rotavirus Infections - epidemiology ; Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</subject><ispartof>Transactions of the Royal Society of Tropical Medicine and Hygiene, 2014-08, Vol.108 (8), p.461-465</ispartof><rights>Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene 2014. This work is written by (a) US Government employee(s) and is in the public domain in the US. 2014</rights><rights>2015 INIST-CNRS</rights><rights>Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene 2014. This work is written by (a) US Government employee(s) and is in the public domain in the US.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c395t-b3b62a809e7e17324a9107baecd7ed4b2293159ecaca9d07d20ae4e71bed64c3</citedby><cites>FETCH-LOGICAL-c395t-b3b62a809e7e17324a9107baecd7ed4b2293159ecaca9d07d20ae4e71bed64c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27915,27916</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28605814$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24942900$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Elyan, Diaa</creatorcontrib><creatorcontrib>Wasfy, Momtaz</creatorcontrib><creatorcontrib>El Mohammady, Hanan</creatorcontrib><creatorcontrib>Hassan, Khaled</creatorcontrib><creatorcontrib>Monestersky, Jesse</creatorcontrib><creatorcontrib>Noormal, Bashir</creatorcontrib><creatorcontrib>Oyofo, Buhari</creatorcontrib><title>Non-bacterial etiologies of diarrheal diseases in Afghanistan</title><title>Transactions of the Royal Society of Tropical Medicine and Hygiene</title><addtitle>Trans R Soc Trop Med Hyg</addtitle><description>Background
Microbial diarrheal diseases are one of the leading causes of child morbidity and mortality in developing countries. This study aimed to identify the main causes of non-bacterial diarrhea in Afghanistan.
Methods
A total of 699 stools were collected from children aged under 5 years who presented with diarrhea at Indira Gandhi and Kandahar hospitals. Frozen aliquots were preserved for screening against rotavirus, astrovirus, adenovirus, norovirus, Cryptosporidium and Giardia, when bacterial cultures tested negative. Tests were performed at the hospitals after laboratory staff were trained and provided with enzyme-immunoassays and equipment. Results were confirmed at the U.S. Naval Medical Research Unit No. 3, Cairo, Egypt.
Results
Of the samples tested, 71.9% (503/699) were infected with one or more pathogens. However, the majority (85.8%; 432/503) showed single infections: rotavirus (72.2%; 329/432), Cryptosporidium (14.1%; 61/432), Giardia (5.1%; 22/432), astrovirus (2.3%; 10/432), adenovirus (1.6%; 7/432) and norovirus (0.7%; 3/432). The remaining 14% (71/503) showed mixed infections of the tested pathogens.
Conclusions
Non-bacterial pathogens were identified that could enable health officials to adopt more effective treatment and control measures for diarrhea in Afghanistan.</description><subject>Adenoviridae Infections - epidemiology</subject><subject>Afghanistan - epidemiology</subject><subject>Astroviridae Infections - epidemiology</subject><subject>Biological and medical sciences</subject><subject>Caliciviridae Infections - epidemiology</subject><subject>Child, Preschool</subject><subject>Cryptosporidiosis - epidemiology</subject><subject>Diarrhea - parasitology</subject><subject>Diarrhea - virology</subject><subject>Feces - parasitology</subject><subject>Feces - virology</subject><subject>Female</subject><subject>Gastroenterology. Liver. Pancreas. Abdomen</subject><subject>General aspects</subject><subject>Giardiasis - epidemiology</subject><subject>Humans</subject><subject>Infant</subject><subject>Infant, Newborn</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Other diseases. Semiology</subject><subject>Rotavirus Infections - epidemiology</subject><subject>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</subject><issn>0035-9203</issn><issn>1878-3503</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqFkDtPw0AQhE8IREKgpEVukGgMey_bV1CgiJcUQZPeWp_XySE_wp1d8O8xciAl1UijT7Ozw9glh1sORt71PvTNdpQBTHLE5jxLs1hqkMdsDiB1bATIGTsL4QNAaK7NKZsJZZQwAHN2_9a1cYG2J--wjqh3Xd1tHIWoq6LSofdbGv3SBcIwuq6NHqrNFlsXemzP2UmFdaCLvS7Y-ulxvXyJV-_Pr8uHVWyl0X1cyCIRmIGhlHgqhULDIS2QbJlSqQohjByLkUWLpoS0FICkKOUFlYmycsFuptid7z4HCn3euGCprrGlbgg510qr8c0sG9F4Qq3vQvBU5TvvGvRfOYf8Z7B8GiyfBhv5q330UDRU_tG_C43A9R7AYLGuPLbWhQOXJaAzrg4du2H3z81vpT2ETg</recordid><startdate>20140801</startdate><enddate>20140801</enddate><creator>Elyan, Diaa</creator><creator>Wasfy, Momtaz</creator><creator>El Mohammady, Hanan</creator><creator>Hassan, Khaled</creator><creator>Monestersky, Jesse</creator><creator>Noormal, Bashir</creator><creator>Oyofo, Buhari</creator><general>Oxford University Press</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20140801</creationdate><title>Non-bacterial etiologies of diarrheal diseases in Afghanistan</title><author>Elyan, Diaa ; Wasfy, Momtaz ; El Mohammady, Hanan ; Hassan, Khaled ; Monestersky, Jesse ; Noormal, Bashir ; Oyofo, Buhari</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c395t-b3b62a809e7e17324a9107baecd7ed4b2293159ecaca9d07d20ae4e71bed64c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adenoviridae Infections - epidemiology</topic><topic>Afghanistan - epidemiology</topic><topic>Astroviridae Infections - epidemiology</topic><topic>Biological and medical sciences</topic><topic>Caliciviridae Infections - epidemiology</topic><topic>Child, Preschool</topic><topic>Cryptosporidiosis - epidemiology</topic><topic>Diarrhea - parasitology</topic><topic>Diarrhea - virology</topic><topic>Feces - parasitology</topic><topic>Feces - virology</topic><topic>Female</topic><topic>Gastroenterology. Liver. Pancreas. Abdomen</topic><topic>General aspects</topic><topic>Giardiasis - epidemiology</topic><topic>Humans</topic><topic>Infant</topic><topic>Infant, Newborn</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Other diseases. Semiology</topic><topic>Rotavirus Infections - epidemiology</topic><topic>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Elyan, Diaa</creatorcontrib><creatorcontrib>Wasfy, Momtaz</creatorcontrib><creatorcontrib>El Mohammady, Hanan</creatorcontrib><creatorcontrib>Hassan, Khaled</creatorcontrib><creatorcontrib>Monestersky, Jesse</creatorcontrib><creatorcontrib>Noormal, Bashir</creatorcontrib><creatorcontrib>Oyofo, Buhari</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Transactions of the Royal Society of Tropical Medicine and Hygiene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Elyan, Diaa</au><au>Wasfy, Momtaz</au><au>El Mohammady, Hanan</au><au>Hassan, Khaled</au><au>Monestersky, Jesse</au><au>Noormal, Bashir</au><au>Oyofo, Buhari</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Non-bacterial etiologies of diarrheal diseases in Afghanistan</atitle><jtitle>Transactions of the Royal Society of Tropical Medicine and Hygiene</jtitle><addtitle>Trans R Soc Trop Med Hyg</addtitle><date>2014-08-01</date><risdate>2014</risdate><volume>108</volume><issue>8</issue><spage>461</spage><epage>465</epage><pages>461-465</pages><issn>0035-9203</issn><eissn>1878-3503</eissn><coden>TRSTAZ</coden><abstract>Background
Microbial diarrheal diseases are one of the leading causes of child morbidity and mortality in developing countries. This study aimed to identify the main causes of non-bacterial diarrhea in Afghanistan.
Methods
A total of 699 stools were collected from children aged under 5 years who presented with diarrhea at Indira Gandhi and Kandahar hospitals. Frozen aliquots were preserved for screening against rotavirus, astrovirus, adenovirus, norovirus, Cryptosporidium and Giardia, when bacterial cultures tested negative. Tests were performed at the hospitals after laboratory staff were trained and provided with enzyme-immunoassays and equipment. Results were confirmed at the U.S. Naval Medical Research Unit No. 3, Cairo, Egypt.
Results
Of the samples tested, 71.9% (503/699) were infected with one or more pathogens. However, the majority (85.8%; 432/503) showed single infections: rotavirus (72.2%; 329/432), Cryptosporidium (14.1%; 61/432), Giardia (5.1%; 22/432), astrovirus (2.3%; 10/432), adenovirus (1.6%; 7/432) and norovirus (0.7%; 3/432). The remaining 14% (71/503) showed mixed infections of the tested pathogens.
Conclusions
Non-bacterial pathogens were identified that could enable health officials to adopt more effective treatment and control measures for diarrhea in Afghanistan.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>24942900</pmid><doi>10.1093/trstmh/tru096</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenoviridae Infections - epidemiology Afghanistan - epidemiology Astroviridae Infections - epidemiology Biological and medical sciences Caliciviridae Infections - epidemiology Child, Preschool Cryptosporidiosis - epidemiology Diarrhea - parasitology Diarrhea - virology Feces - parasitology Feces - virology Female Gastroenterology. Liver. Pancreas. Abdomen General aspects Giardiasis - epidemiology Humans Infant Infant, Newborn Male Medical sciences Other diseases. Semiology Rotavirus Infections - epidemiology Stomach. Duodenum. Small intestine. Colon. Rectum. Anus |
title | Non-bacterial etiologies of diarrheal diseases in Afghanistan |
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