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Use of the comet assay for studying environmental genotoxicity: Comparisons between visual and image analyses
In order to evaluate the applicability of different measurement parameters employed in the comet assay for analyzing environmental samples, fish hepatoma (RTH‐149) cells were exposed to concentrations of the model genotoxic agent hydrogen peroxide (H2O2; 1, 5, and 10 μM) and to five water samples fr...
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Published in: | Environmental and molecular mutagenesis 2003, Vol.42 (3), p.155-165 |
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description | In order to evaluate the applicability of different measurement parameters employed in the comet assay for analyzing environmental samples, fish hepatoma (RTH‐149) cells were exposed to concentrations of the model genotoxic agent hydrogen peroxide (H2O2; 1, 5, and 10 μM) and to five water samples from sites along the Kishon River, the most polluted river in Israel. DNA damage was scored in parallel by visual and computer‐image (Viscomet) analyses using 12 different parameters. Each parameter exhibited a different profile of responses. The four visual parameters were highly sensitive to the lowest (1 μM) H2O2 concentration (1.8–7.0‐fold of the control). At 10 μM H2O2 exposure, the visual parameter, percentage severe damage, showed the highest (40.3‐fold) response while four other parameters, tail area, tail extent moment (Viscomet), mean actual tail length and cumulative tail length (visual analysis), also had substantially elevated responses (8–11‐fold). We found that the DNA damage induced by field samples was similar in magnitude to the damage induced by 1 μM H2O2, with only some of the parameters being highly sensitive to the damage. Only about one‐half of the parameters could distinguish four significant levels of genotoxicity among the five sampling sites, while the remaining parameters detected only three levels. It is concluded that the choice of parameters for analyzing genotoxicity in ecotoxicological studies should be made in accordance with the characteristics of each parameter. Environ. Mol. Mutagen. 42:155–165, 2003. © 2003 Wiley‐Liss, Inc. |
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DNA damage was scored in parallel by visual and computer‐image (Viscomet) analyses using 12 different parameters. Each parameter exhibited a different profile of responses. The four visual parameters were highly sensitive to the lowest (1 μM) H2O2 concentration (1.8–7.0‐fold of the control). At 10 μM H2O2 exposure, the visual parameter, percentage severe damage, showed the highest (40.3‐fold) response while four other parameters, tail area, tail extent moment (Viscomet), mean actual tail length and cumulative tail length (visual analysis), also had substantially elevated responses (8–11‐fold). We found that the DNA damage induced by field samples was similar in magnitude to the damage induced by 1 μM H2O2, with only some of the parameters being highly sensitive to the damage. Only about one‐half of the parameters could distinguish four significant levels of genotoxicity among the five sampling sites, while the remaining parameters detected only three levels. 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Mol. Mutagen</addtitle><description>In order to evaluate the applicability of different measurement parameters employed in the comet assay for analyzing environmental samples, fish hepatoma (RTH‐149) cells were exposed to concentrations of the model genotoxic agent hydrogen peroxide (H2O2; 1, 5, and 10 μM) and to five water samples from sites along the Kishon River, the most polluted river in Israel. DNA damage was scored in parallel by visual and computer‐image (Viscomet) analyses using 12 different parameters. Each parameter exhibited a different profile of responses. The four visual parameters were highly sensitive to the lowest (1 μM) H2O2 concentration (1.8–7.0‐fold of the control). At 10 μM H2O2 exposure, the visual parameter, percentage severe damage, showed the highest (40.3‐fold) response while four other parameters, tail area, tail extent moment (Viscomet), mean actual tail length and cumulative tail length (visual analysis), also had substantially elevated responses (8–11‐fold). We found that the DNA damage induced by field samples was similar in magnitude to the damage induced by 1 μM H2O2, with only some of the parameters being highly sensitive to the damage. Only about one‐half of the parameters could distinguish four significant levels of genotoxicity among the five sampling sites, while the remaining parameters detected only three levels. It is concluded that the choice of parameters for analyzing genotoxicity in ecotoxicological studies should be made in accordance with the characteristics of each parameter. Environ. Mol. Mutagen. 42:155–165, 2003. © 2003 Wiley‐Liss, Inc.</description><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Cell Line</subject><subject>Comet Assay</subject><subject>computer-image analysis</subject><subject>environmental monitoring</subject><subject>Environmental Pollutants - toxicity</subject><subject>Fishes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>genotoxicity</subject><subject>hydrogen peroxide</subject><subject>Hydrogen Peroxide - toxicity</subject><subject>Lac Operon</subject><subject>Medical sciences</subject><subject>Microscopy, Fluorescence</subject><subject>Mutagens - toxicity</subject><subject>Mutation</subject><subject>Pisces</subject><subject>Toxicology</subject><subject>Transgenes</subject><subject>visual scoring</subject><issn>0893-6692</issn><issn>1098-2280</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNp10MFu1DAQBmALgehSkHgC5AuIS8B27DjhhqLSBRWQEBVHy3HGiyGxF0_SNm9Pyi70xGnm8Gn-0U_IU85eccbEaxjXyevmHtlw1tSFEDW7TzasbsqiqhpxQh4h_mCMc9mIh-SES6UqIcoNGS8RaPJ0-g7UpREmahHtQn3KFKe5X0LcUYhXIac4QpzsQHcQ05RuggvT8oa2adzbHDBFpB1M1wCRXgWcV2hjT8Nod7BudlgQ8DF54O2A8OQ4T8nlu7Ov7ba4-Hz-vn17UTjJq6YolZK690KVHgTTuqldxYUWjYReSev7DmRfS-ed8tB5V-uy6yomrJTa6YqVp-TF4e4-p18z4GTGgA6GwUZIMxperTGM6xW-PECXE2IGb_Z5fTkvhjNzW62B0fypdqXPjjfnboT-Dh67XMHzI7Do7OCzjS7gnVNifVHdPlcc3HUYYPlvoDn7-Df46ANOcPPP2_zTVLrUynz7dG7a7Yd2-2XLTVv-Bokbn3U</recordid><startdate>2003</startdate><enddate>2003</enddate><creator>Avishai, Nanthawan</creator><creator>Rabinowitz, Claudette</creator><creator>Rinkevich, Baruch</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley-Liss</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TV</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>2003</creationdate><title>Use of the comet assay for studying environmental genotoxicity: Comparisons between visual and image analyses</title><author>Avishai, Nanthawan ; Rabinowitz, Claudette ; Rinkevich, Baruch</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4169-35547df253fe207798c6127294ed54afdbe4d84cfc5febfc873bb602a447c7603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Cell Line</topic><topic>Comet Assay</topic><topic>computer-image analysis</topic><topic>environmental monitoring</topic><topic>Environmental Pollutants - toxicity</topic><topic>Fishes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetics of eukaryotes. Biological and molecular evolution</topic><topic>genotoxicity</topic><topic>hydrogen peroxide</topic><topic>Hydrogen Peroxide - toxicity</topic><topic>Lac Operon</topic><topic>Medical sciences</topic><topic>Microscopy, Fluorescence</topic><topic>Mutagens - toxicity</topic><topic>Mutation</topic><topic>Pisces</topic><topic>Toxicology</topic><topic>Transgenes</topic><topic>visual scoring</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Avishai, Nanthawan</creatorcontrib><creatorcontrib>Rabinowitz, Claudette</creatorcontrib><creatorcontrib>Rinkevich, Baruch</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Pollution Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Environmental and molecular mutagenesis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Avishai, Nanthawan</au><au>Rabinowitz, Claudette</au><au>Rinkevich, Baruch</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Use of the comet assay for studying environmental genotoxicity: Comparisons between visual and image analyses</atitle><jtitle>Environmental and molecular mutagenesis</jtitle><addtitle>Environ. Mol. Mutagen</addtitle><date>2003</date><risdate>2003</risdate><volume>42</volume><issue>3</issue><spage>155</spage><epage>165</epage><pages>155-165</pages><issn>0893-6692</issn><eissn>1098-2280</eissn><coden>EMMUEG</coden><abstract>In order to evaluate the applicability of different measurement parameters employed in the comet assay for analyzing environmental samples, fish hepatoma (RTH‐149) cells were exposed to concentrations of the model genotoxic agent hydrogen peroxide (H2O2; 1, 5, and 10 μM) and to five water samples from sites along the Kishon River, the most polluted river in Israel. DNA damage was scored in parallel by visual and computer‐image (Viscomet) analyses using 12 different parameters. Each parameter exhibited a different profile of responses. The four visual parameters were highly sensitive to the lowest (1 μM) H2O2 concentration (1.8–7.0‐fold of the control). At 10 μM H2O2 exposure, the visual parameter, percentage severe damage, showed the highest (40.3‐fold) response while four other parameters, tail area, tail extent moment (Viscomet), mean actual tail length and cumulative tail length (visual analysis), also had substantially elevated responses (8–11‐fold). We found that the DNA damage induced by field samples was similar in magnitude to the damage induced by 1 μM H2O2, with only some of the parameters being highly sensitive to the damage. Only about one‐half of the parameters could distinguish four significant levels of genotoxicity among the five sampling sites, while the remaining parameters detected only three levels. It is concluded that the choice of parameters for analyzing genotoxicity in ecotoxicological studies should be made in accordance with the characteristics of each parameter. Environ. Mol. 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subjects | Animals Biological and medical sciences Cell Line Comet Assay computer-image analysis environmental monitoring Environmental Pollutants - toxicity Fishes Fundamental and applied biological sciences. Psychology Genetics of eukaryotes. Biological and molecular evolution genotoxicity hydrogen peroxide Hydrogen Peroxide - toxicity Lac Operon Medical sciences Microscopy, Fluorescence Mutagens - toxicity Mutation Pisces Toxicology Transgenes visual scoring |
title | Use of the comet assay for studying environmental genotoxicity: Comparisons between visual and image analyses |
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