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cDNA cloning, substrate specificity and expression study of tobacco caffeoyl-CoA 3-O-methyltransferase, a lignin biosynthetic enzyme
Four caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) cDNA clones were isolated from RNA extracted from TMV-infected tobacco leaves using an heterologous DNA probe. The cDNAs were 84-93% identical in their nucleotide sequences, indicating that they are the products of four closely related genes. A compa...
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Published in: | Plant molecular biology 1998-02, Vol.36 (3), p.427-437 |
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description | Four caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) cDNA clones were isolated from RNA extracted from TMV-infected tobacco leaves using an heterologous DNA probe. The cDNAs were 84-93% identical in their nucleotide sequences, indicating that they are the products of four closely related genes. A comparison of the CCoAOMT cDNAs with database sequences and Southern blot analysis indicated that they are encoded by a new CCoAOMT family of tobacco. Overall expression of this gene family in tobacco tissues was investigated by RNA blot analysis. The expression of each individual gene was studied by RT-PCR coupled with RFLP analysis of PCR products, taking advantage of the presence of specific restriction sites in each cloned cDNA. Two members of the CCoAOMT gene family appeared to be constitutively expressed in various plant organs and tissues whereas the two others were preferentially expressed in flower organs, after tobacco mosaic virus (TMV) infection or elicitor treatment of leaves. The CCoAOMT enzymatic protein expressed in bacteria was purified and shown to be specific for the caffeoyl-CoA and 5-hydroxyferuloyl-CoA esters and to have no activity against free caffeic acid and 5-hydroxyferulic acid. The pattern of CCoAOMT transcript accumulation during development of tobacco stem was found closely related to that of COMT I genes which have been shown to be specifically involved in lignin biosynthesis. Moreover, the inhibition of COMT I gene expression in transgenic tobacco was also shown to decrease CCoAOMT gene expression, particularly in the most lignified tissues. Thus, the expression pattern and the substrate specificity of tobacco CCoAOMT sustain a preferential role in lignin biosynthesis. |
doi_str_mv | 10.1023/a:1005969825070 |
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(Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).) ; Maury, S ; Pincon, G ; Legrand, M</creator><creatorcontrib>Martz, F. (Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).) ; Maury, S ; Pincon, G ; Legrand, M</creatorcontrib><description>Four caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) cDNA clones were isolated from RNA extracted from TMV-infected tobacco leaves using an heterologous DNA probe. The cDNAs were 84-93% identical in their nucleotide sequences, indicating that they are the products of four closely related genes. A comparison of the CCoAOMT cDNAs with database sequences and Southern blot analysis indicated that they are encoded by a new CCoAOMT family of tobacco. Overall expression of this gene family in tobacco tissues was investigated by RNA blot analysis. The expression of each individual gene was studied by RT-PCR coupled with RFLP analysis of PCR products, taking advantage of the presence of specific restriction sites in each cloned cDNA. Two members of the CCoAOMT gene family appeared to be constitutively expressed in various plant organs and tissues whereas the two others were preferentially expressed in flower organs, after tobacco mosaic virus (TMV) infection or elicitor treatment of leaves. The CCoAOMT enzymatic protein expressed in bacteria was purified and shown to be specific for the caffeoyl-CoA and 5-hydroxyferuloyl-CoA esters and to have no activity against free caffeic acid and 5-hydroxyferulic acid. The pattern of CCoAOMT transcript accumulation during development of tobacco stem was found closely related to that of COMT I genes which have been shown to be specifically involved in lignin biosynthesis. Moreover, the inhibition of COMT I gene expression in transgenic tobacco was also shown to decrease CCoAOMT gene expression, particularly in the most lignified tissues. Thus, the expression pattern and the substrate specificity of tobacco CCoAOMT sustain a preferential role in lignin biosynthesis.</description><identifier>ISSN: 0167-4412</identifier><identifier>EISSN: 1573-5028</identifier><identifier>DOI: 10.1023/a:1005969825070</identifier><identifier>PMID: 9484483</identifier><language>eng</language><publisher>Netherlands: Springer Nature B.V</publisher><subject>ADN ; Amino Acid Sequence ; Base Sequence ; BIOSINTESIS ; BIOSYNTHESE ; BIOSYNTHESIS ; CLONACION MOLECULAR ; CLONAGE MOLECULAIRE ; Cloning ; Cloning, Molecular ; Databases as Topic ; DNA ; DNA, Complementary ; Esters ; EXPRESION GENICA ; EXPRESSION DES GENES ; GENE EXPRESSION ; Gene Expression Regulation, Developmental ; Gene Expression Regulation, Plant ; Genes, Plant ; Leaves ; Lignin - biosynthesis ; LIGNINAS ; LIGNINE ; LIGNINS ; Methyltransferases - biosynthesis ; Methyltransferases - chemistry ; Methyltransferases - genetics ; MOLECULAR CLONING ; Molecular Sequence Data ; Multigene Family ; NICOTIANA ; Nicotiana - enzymology ; Nicotiana - genetics ; NUCLEOTIDE SEQUENCE ; Plant Leaves ; PLANTAS TRANSGENICAS ; PLANTE TRANSGENIQUE ; Plants, Toxic ; Proteins ; SECUENCIA NUCLEOTIDICA ; Sequence Alignment ; Sequence Homology, Amino Acid ; Sequence Homology, Nucleic Acid ; SEQUENCE NUCLEOTIDIQUE ; Substrate Specificity ; Tobacco ; TRANSFERASAS ; TRANSFERASE ; TRANSFERASES ; TRANSGENIC PLANTS</subject><ispartof>Plant molecular biology, 1998-02, Vol.36 (3), p.427-437</ispartof><rights>Kluwer Academic Publishers 1998</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c427t-2399947a6700ca0feb5594ed9ae7b0366e02bc9a651ac0e3106993c5766290eb3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9484483$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Martz, F. (Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).)</creatorcontrib><creatorcontrib>Maury, S</creatorcontrib><creatorcontrib>Pincon, G</creatorcontrib><creatorcontrib>Legrand, M</creatorcontrib><title>cDNA cloning, substrate specificity and expression study of tobacco caffeoyl-CoA 3-O-methyltransferase, a lignin biosynthetic enzyme</title><title>Plant molecular biology</title><addtitle>Plant Mol Biol</addtitle><description>Four caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) cDNA clones were isolated from RNA extracted from TMV-infected tobacco leaves using an heterologous DNA probe. The cDNAs were 84-93% identical in their nucleotide sequences, indicating that they are the products of four closely related genes. A comparison of the CCoAOMT cDNAs with database sequences and Southern blot analysis indicated that they are encoded by a new CCoAOMT family of tobacco. Overall expression of this gene family in tobacco tissues was investigated by RNA blot analysis. The expression of each individual gene was studied by RT-PCR coupled with RFLP analysis of PCR products, taking advantage of the presence of specific restriction sites in each cloned cDNA. Two members of the CCoAOMT gene family appeared to be constitutively expressed in various plant organs and tissues whereas the two others were preferentially expressed in flower organs, after tobacco mosaic virus (TMV) infection or elicitor treatment of leaves. The CCoAOMT enzymatic protein expressed in bacteria was purified and shown to be specific for the caffeoyl-CoA and 5-hydroxyferuloyl-CoA esters and to have no activity against free caffeic acid and 5-hydroxyferulic acid. The pattern of CCoAOMT transcript accumulation during development of tobacco stem was found closely related to that of COMT I genes which have been shown to be specifically involved in lignin biosynthesis. Moreover, the inhibition of COMT I gene expression in transgenic tobacco was also shown to decrease CCoAOMT gene expression, particularly in the most lignified tissues. Thus, the expression pattern and the substrate specificity of tobacco CCoAOMT sustain a preferential role in lignin biosynthesis.</description><subject>ADN</subject><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>BIOSINTESIS</subject><subject>BIOSYNTHESE</subject><subject>BIOSYNTHESIS</subject><subject>CLONACION MOLECULAR</subject><subject>CLONAGE MOLECULAIRE</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>Databases as Topic</subject><subject>DNA</subject><subject>DNA, Complementary</subject><subject>Esters</subject><subject>EXPRESION GENICA</subject><subject>EXPRESSION DES GENES</subject><subject>GENE EXPRESSION</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genes, Plant</subject><subject>Leaves</subject><subject>Lignin - biosynthesis</subject><subject>LIGNINAS</subject><subject>LIGNINE</subject><subject>LIGNINS</subject><subject>Methyltransferases - biosynthesis</subject><subject>Methyltransferases - chemistry</subject><subject>Methyltransferases - genetics</subject><subject>MOLECULAR CLONING</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family</subject><subject>NICOTIANA</subject><subject>Nicotiana - enzymology</subject><subject>Nicotiana - genetics</subject><subject>NUCLEOTIDE SEQUENCE</subject><subject>Plant Leaves</subject><subject>PLANTAS TRANSGENICAS</subject><subject>PLANTE TRANSGENIQUE</subject><subject>Plants, Toxic</subject><subject>Proteins</subject><subject>SECUENCIA NUCLEOTIDICA</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>SEQUENCE NUCLEOTIDIQUE</subject><subject>Substrate Specificity</subject><subject>Tobacco</subject><subject>TRANSFERASAS</subject><subject>TRANSFERASE</subject><subject>TRANSFERASES</subject><subject>TRANSGENIC PLANTS</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNpdkM1r3DAQxUVJSTfbnnsqiBxyitvRt9Xbss1HYUku7dnI2vFGwZa2lgxxz_3Da-hCIac5zG_em_cI-cjgMwMuvrivDEBZbWuuwMAbsmLKiEoBr8_ICpg2lZSMvyMXOT8DLLDQ5-TcylrKWqzIH__tYUN9n2KIh2uapzaX0RWk-Yg-dMGHMlMX9xRfjiPmHFKkuUz7maaOltQ67xP1ruswzX21TRsqqsdqwPI094tQzB2OLuM1dbQPh8WEtiHlOZYnLMFTjL_nAd-Tt53rM344zTX5eXvzY3tf7R7vvm83u8pLbkrFhbVWGqcNgHfQYauUlbi3Dk275NIIvPXWacWcBxQMtLXCK6M1t4CtWJOrf7rHMf2aMJdmCNlj37uIacoN01xIA2IBL1-Bz2ka4_JbYwyTivGlxzX5dIKmdsB9cxzD4Ma5OXX7f9-51LjDGHLzsGPW1sst41L8BYL0hJk</recordid><startdate>19980201</startdate><enddate>19980201</enddate><creator>Martz, F. 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(Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).) ; Maury, S ; Pincon, G ; Legrand, M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c427t-2399947a6700ca0feb5594ed9ae7b0366e02bc9a651ac0e3106993c5766290eb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>ADN</topic><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>BIOSINTESIS</topic><topic>BIOSYNTHESE</topic><topic>BIOSYNTHESIS</topic><topic>CLONACION MOLECULAR</topic><topic>CLONAGE MOLECULAIRE</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>Databases as Topic</topic><topic>DNA</topic><topic>DNA, Complementary</topic><topic>Esters</topic><topic>EXPRESION GENICA</topic><topic>EXPRESSION DES GENES</topic><topic>GENE EXPRESSION</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Expression Regulation, Plant</topic><topic>Genes, Plant</topic><topic>Leaves</topic><topic>Lignin - biosynthesis</topic><topic>LIGNINAS</topic><topic>LIGNINE</topic><topic>LIGNINS</topic><topic>Methyltransferases - biosynthesis</topic><topic>Methyltransferases - chemistry</topic><topic>Methyltransferases - genetics</topic><topic>MOLECULAR CLONING</topic><topic>Molecular Sequence Data</topic><topic>Multigene Family</topic><topic>NICOTIANA</topic><topic>Nicotiana - enzymology</topic><topic>Nicotiana - genetics</topic><topic>NUCLEOTIDE SEQUENCE</topic><topic>Plant Leaves</topic><topic>PLANTAS TRANSGENICAS</topic><topic>PLANTE TRANSGENIQUE</topic><topic>Plants, Toxic</topic><topic>Proteins</topic><topic>SECUENCIA NUCLEOTIDICA</topic><topic>Sequence Alignment</topic><topic>Sequence Homology, Amino Acid</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>SEQUENCE NUCLEOTIDIQUE</topic><topic>Substrate Specificity</topic><topic>Tobacco</topic><topic>TRANSFERASAS</topic><topic>TRANSFERASE</topic><topic>TRANSFERASES</topic><topic>TRANSGENIC PLANTS</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Martz, F. (Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).)</creatorcontrib><creatorcontrib>Maury, S</creatorcontrib><creatorcontrib>Pincon, G</creatorcontrib><creatorcontrib>Legrand, M</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health Medical collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest research library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Plant molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Martz, F. (Institut de Biologie Moleculaire des Plantes du CNRS, Strasbourg (France).)</au><au>Maury, S</au><au>Pincon, G</au><au>Legrand, M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>cDNA cloning, substrate specificity and expression study of tobacco caffeoyl-CoA 3-O-methyltransferase, a lignin biosynthetic enzyme</atitle><jtitle>Plant molecular biology</jtitle><addtitle>Plant Mol Biol</addtitle><date>1998-02-01</date><risdate>1998</risdate><volume>36</volume><issue>3</issue><spage>427</spage><epage>437</epage><pages>427-437</pages><issn>0167-4412</issn><eissn>1573-5028</eissn><abstract>Four caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) cDNA clones were isolated from RNA extracted from TMV-infected tobacco leaves using an heterologous DNA probe. The cDNAs were 84-93% identical in their nucleotide sequences, indicating that they are the products of four closely related genes. A comparison of the CCoAOMT cDNAs with database sequences and Southern blot analysis indicated that they are encoded by a new CCoAOMT family of tobacco. Overall expression of this gene family in tobacco tissues was investigated by RNA blot analysis. The expression of each individual gene was studied by RT-PCR coupled with RFLP analysis of PCR products, taking advantage of the presence of specific restriction sites in each cloned cDNA. Two members of the CCoAOMT gene family appeared to be constitutively expressed in various plant organs and tissues whereas the two others were preferentially expressed in flower organs, after tobacco mosaic virus (TMV) infection or elicitor treatment of leaves. The CCoAOMT enzymatic protein expressed in bacteria was purified and shown to be specific for the caffeoyl-CoA and 5-hydroxyferuloyl-CoA esters and to have no activity against free caffeic acid and 5-hydroxyferulic acid. The pattern of CCoAOMT transcript accumulation during development of tobacco stem was found closely related to that of COMT I genes which have been shown to be specifically involved in lignin biosynthesis. Moreover, the inhibition of COMT I gene expression in transgenic tobacco was also shown to decrease CCoAOMT gene expression, particularly in the most lignified tissues. Thus, the expression pattern and the substrate specificity of tobacco CCoAOMT sustain a preferential role in lignin biosynthesis.</abstract><cop>Netherlands</cop><pub>Springer Nature B.V</pub><pmid>9484483</pmid><doi>10.1023/a:1005969825070</doi><tpages>11</tpages></addata></record> |
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ispartof | Plant molecular biology, 1998-02, Vol.36 (3), p.427-437 |
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subjects | ADN Amino Acid Sequence Base Sequence BIOSINTESIS BIOSYNTHESE BIOSYNTHESIS CLONACION MOLECULAR CLONAGE MOLECULAIRE Cloning Cloning, Molecular Databases as Topic DNA DNA, Complementary Esters EXPRESION GENICA EXPRESSION DES GENES GENE EXPRESSION Gene Expression Regulation, Developmental Gene Expression Regulation, Plant Genes, Plant Leaves Lignin - biosynthesis LIGNINAS LIGNINE LIGNINS Methyltransferases - biosynthesis Methyltransferases - chemistry Methyltransferases - genetics MOLECULAR CLONING Molecular Sequence Data Multigene Family NICOTIANA Nicotiana - enzymology Nicotiana - genetics NUCLEOTIDE SEQUENCE Plant Leaves PLANTAS TRANSGENICAS PLANTE TRANSGENIQUE Plants, Toxic Proteins SECUENCIA NUCLEOTIDICA Sequence Alignment Sequence Homology, Amino Acid Sequence Homology, Nucleic Acid SEQUENCE NUCLEOTIDIQUE Substrate Specificity Tobacco TRANSFERASAS TRANSFERASE TRANSFERASES TRANSGENIC PLANTS |
title | cDNA cloning, substrate specificity and expression study of tobacco caffeoyl-CoA 3-O-methyltransferase, a lignin biosynthetic enzyme |
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