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Kinase Regulation by Hydrophobic Spine Assembly in Cancer
A new model of kinase regulation based on the assembly of hydrophobic spines has been proposed. Changes in their positions can explain the mechanism of kinase activation. Here, we examined mutations in human cancer for clues about the regulation of the hydrophobic spines by focusing initially on mut...
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Published in: | Molecular and cellular biology 2015-01, Vol.35 (1), p.264-276 |
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container_title | Molecular and cellular biology |
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creator | Hu, Jiancheng Ahuja, Lalima G. Meharena, Hiruy S. Kannan, Natarajan Kornev, Alexandr P. Taylor, Susan S. Shaw, Andrey S. |
description | A new model of kinase regulation based on the assembly of hydrophobic spines has been proposed. Changes in their positions can explain the mechanism of kinase activation. Here, we examined mutations in human cancer for clues about the regulation of the hydrophobic spines by focusing initially on mutations to Phe. We identified a selected number of Phe mutations in a small group of kinases that included BRAF, ABL1, and the epidermal growth factor receptor. Testing some of these mutations in BRAF, we found that one of the mutations impaired ATP binding and catalytic activity but promoted noncatalytic allosteric functions. Other Phe mutations functioned to promote constitutive catalytic activity. One of these mutations revealed a previously underappreciated hydrophobic surface that functions to position the dynamic regulatory αC-helix. This supports the key role of the C-helix as a signal integration motif for coordinating multiple elements of the kinase to create an active conformation. The importance of the hydrophobic space around the αC-helix was further tested by studying a V600F mutant, which was constitutively active in the absence of the negative charge that is associated with the common V600E mutation. Many hydrophobic mutations strategically localized along the C-helix can thus drive kinase activation. |
doi_str_mv | 10.1128/MCB.00943-14 |
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Changes in their positions can explain the mechanism of kinase activation. Here, we examined mutations in human cancer for clues about the regulation of the hydrophobic spines by focusing initially on mutations to Phe. We identified a selected number of Phe mutations in a small group of kinases that included BRAF, ABL1, and the epidermal growth factor receptor. Testing some of these mutations in BRAF, we found that one of the mutations impaired ATP binding and catalytic activity but promoted noncatalytic allosteric functions. Other Phe mutations functioned to promote constitutive catalytic activity. One of these mutations revealed a previously underappreciated hydrophobic surface that functions to position the dynamic regulatory αC-helix. This supports the key role of the C-helix as a signal integration motif for coordinating multiple elements of the kinase to create an active conformation. The importance of the hydrophobic space around the αC-helix was further tested by studying a V600F mutant, which was constitutively active in the absence of the negative charge that is associated with the common V600E mutation. Many hydrophobic mutations strategically localized along the C-helix can thus drive kinase activation.</description><identifier>ISSN: 1098-5549</identifier><identifier>ISSN: 0270-7306</identifier><identifier>EISSN: 1098-5549</identifier><identifier>DOI: 10.1128/MCB.00943-14</identifier><identifier>PMID: 25348715</identifier><language>eng</language><publisher>United States: Taylor & Francis</publisher><subject>Adenosine Triphosphate - metabolism ; Allosteric Site ; Catalysis ; Gene Expression Regulation, Neoplastic ; HEK293 Cells ; Histidine - chemistry ; Humans ; Hydrophobic and Hydrophilic Interactions ; Methionine - chemistry ; Models, Molecular ; Mutation ; Neoplasms - enzymology ; Phosphotransferases - physiology ; Protein Structure, Secondary ; Proto-Oncogene Proteins B-raf - genetics ; Proto-Oncogene Proteins c-abl - genetics ; Receptor, Epidermal Growth Factor - genetics</subject><ispartof>Molecular and cellular biology, 2015-01, Vol.35 (1), p.264-276</ispartof><rights>Copyright © 2015, American Society for Microbiology 2015</rights><rights>Copyright © 2015, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright © 2015, American Society for Microbiology. All Rights Reserved. 2015 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-a3bd232d6fe7b711c276dec8de39a52ebcb628ce695faf7136419aa383ce19843</citedby><cites>FETCH-LOGICAL-c475t-a3bd232d6fe7b711c276dec8de39a52ebcb628ce695faf7136419aa383ce19843</cites><orcidid>0000-0003-1615-0030</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4295384/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4295384/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,725,778,782,883,27911,27912,53778,53780</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25348715$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hu, Jiancheng</creatorcontrib><creatorcontrib>Ahuja, Lalima G.</creatorcontrib><creatorcontrib>Meharena, Hiruy S.</creatorcontrib><creatorcontrib>Kannan, Natarajan</creatorcontrib><creatorcontrib>Kornev, Alexandr P.</creatorcontrib><creatorcontrib>Taylor, Susan S.</creatorcontrib><creatorcontrib>Shaw, Andrey S.</creatorcontrib><title>Kinase Regulation by Hydrophobic Spine Assembly in Cancer</title><title>Molecular and cellular biology</title><addtitle>Mol Cell Biol</addtitle><description>A new model of kinase regulation based on the assembly of hydrophobic spines has been proposed. Changes in their positions can explain the mechanism of kinase activation. Here, we examined mutations in human cancer for clues about the regulation of the hydrophobic spines by focusing initially on mutations to Phe. We identified a selected number of Phe mutations in a small group of kinases that included BRAF, ABL1, and the epidermal growth factor receptor. Testing some of these mutations in BRAF, we found that one of the mutations impaired ATP binding and catalytic activity but promoted noncatalytic allosteric functions. Other Phe mutations functioned to promote constitutive catalytic activity. One of these mutations revealed a previously underappreciated hydrophobic surface that functions to position the dynamic regulatory αC-helix. This supports the key role of the C-helix as a signal integration motif for coordinating multiple elements of the kinase to create an active conformation. The importance of the hydrophobic space around the αC-helix was further tested by studying a V600F mutant, which was constitutively active in the absence of the negative charge that is associated with the common V600E mutation. Many hydrophobic mutations strategically localized along the C-helix can thus drive kinase activation.</description><subject>Adenosine Triphosphate - metabolism</subject><subject>Allosteric Site</subject><subject>Catalysis</subject><subject>Gene Expression Regulation, Neoplastic</subject><subject>HEK293 Cells</subject><subject>Histidine - chemistry</subject><subject>Humans</subject><subject>Hydrophobic and Hydrophilic Interactions</subject><subject>Methionine - chemistry</subject><subject>Models, Molecular</subject><subject>Mutation</subject><subject>Neoplasms - enzymology</subject><subject>Phosphotransferases - physiology</subject><subject>Protein Structure, Secondary</subject><subject>Proto-Oncogene Proteins B-raf - genetics</subject><subject>Proto-Oncogene Proteins c-abl - genetics</subject><subject>Receptor, Epidermal Growth Factor - genetics</subject><issn>1098-5549</issn><issn>0270-7306</issn><issn>1098-5549</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNptkM9LwzAUgIMobk5vnqVHD3YmTdM2F2EOdeJE8Mc5pOnrFmmTmbRK_3v3S5ngKQ_y8b3Hh9ApwUNCouzycXw9xJjHNCTxHuoTzLOQsZjv78w9dOT9O8Y44Zgeol7EaJylhPURf9BGegieYdZWstHWBHkXTLrC2cXc5loFLwttIBh5D3VedYE2wVgaBe4YHZSy8nCyfQfo7fbmdTwJp0939-PRNFRxyppQ0ryIaFQkJaR5SoiK0qQAlRVAuWQR5CpPokxBwlkpy5TQJCZcSppRBYRnMR2gq4130eY1FApM42QlFk7X0nXCSi3-_hg9FzP7KeKIM7oWnG8Fzn604BtRa6-gqqQB23pBEsowZgmhS_RigypnvXdQ_q4hWKxqi2Vtsa4tyMp8tnvaL_yTdwmkG0Cb0rpafllXFaKRXWVd6ZYZtRf0X_U3mpONWw</recordid><startdate>20150101</startdate><enddate>20150101</enddate><creator>Hu, Jiancheng</creator><creator>Ahuja, Lalima G.</creator><creator>Meharena, Hiruy S.</creator><creator>Kannan, Natarajan</creator><creator>Kornev, Alexandr P.</creator><creator>Taylor, Susan S.</creator><creator>Shaw, Andrey S.</creator><general>Taylor & Francis</general><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-1615-0030</orcidid></search><sort><creationdate>20150101</creationdate><title>Kinase Regulation by Hydrophobic Spine Assembly in Cancer</title><author>Hu, Jiancheng ; Ahuja, Lalima G. ; Meharena, Hiruy S. ; Kannan, Natarajan ; Kornev, Alexandr P. ; Taylor, Susan S. ; Shaw, Andrey S.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-a3bd232d6fe7b711c276dec8de39a52ebcb628ce695faf7136419aa383ce19843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adenosine Triphosphate - metabolism</topic><topic>Allosteric Site</topic><topic>Catalysis</topic><topic>Gene Expression Regulation, Neoplastic</topic><topic>HEK293 Cells</topic><topic>Histidine - chemistry</topic><topic>Humans</topic><topic>Hydrophobic and Hydrophilic Interactions</topic><topic>Methionine - chemistry</topic><topic>Models, Molecular</topic><topic>Mutation</topic><topic>Neoplasms - enzymology</topic><topic>Phosphotransferases - physiology</topic><topic>Protein Structure, Secondary</topic><topic>Proto-Oncogene Proteins B-raf - genetics</topic><topic>Proto-Oncogene Proteins c-abl - genetics</topic><topic>Receptor, Epidermal Growth Factor - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hu, Jiancheng</creatorcontrib><creatorcontrib>Ahuja, Lalima G.</creatorcontrib><creatorcontrib>Meharena, Hiruy S.</creatorcontrib><creatorcontrib>Kannan, Natarajan</creatorcontrib><creatorcontrib>Kornev, Alexandr P.</creatorcontrib><creatorcontrib>Taylor, Susan S.</creatorcontrib><creatorcontrib>Shaw, Andrey S.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular and cellular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hu, Jiancheng</au><au>Ahuja, Lalima G.</au><au>Meharena, Hiruy S.</au><au>Kannan, Natarajan</au><au>Kornev, Alexandr P.</au><au>Taylor, Susan S.</au><au>Shaw, Andrey S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Kinase Regulation by Hydrophobic Spine Assembly in Cancer</atitle><jtitle>Molecular and cellular biology</jtitle><addtitle>Mol Cell Biol</addtitle><date>2015-01-01</date><risdate>2015</risdate><volume>35</volume><issue>1</issue><spage>264</spage><epage>276</epage><pages>264-276</pages><issn>1098-5549</issn><issn>0270-7306</issn><eissn>1098-5549</eissn><abstract>A new model of kinase regulation based on the assembly of hydrophobic spines has been proposed. Changes in their positions can explain the mechanism of kinase activation. Here, we examined mutations in human cancer for clues about the regulation of the hydrophobic spines by focusing initially on mutations to Phe. We identified a selected number of Phe mutations in a small group of kinases that included BRAF, ABL1, and the epidermal growth factor receptor. Testing some of these mutations in BRAF, we found that one of the mutations impaired ATP binding and catalytic activity but promoted noncatalytic allosteric functions. Other Phe mutations functioned to promote constitutive catalytic activity. One of these mutations revealed a previously underappreciated hydrophobic surface that functions to position the dynamic regulatory αC-helix. This supports the key role of the C-helix as a signal integration motif for coordinating multiple elements of the kinase to create an active conformation. The importance of the hydrophobic space around the αC-helix was further tested by studying a V600F mutant, which was constitutively active in the absence of the negative charge that is associated with the common V600E mutation. Many hydrophobic mutations strategically localized along the C-helix can thus drive kinase activation.</abstract><cop>United States</cop><pub>Taylor & Francis</pub><pmid>25348715</pmid><doi>10.1128/MCB.00943-14</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0003-1615-0030</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adenosine Triphosphate - metabolism Allosteric Site Catalysis Gene Expression Regulation, Neoplastic HEK293 Cells Histidine - chemistry Humans Hydrophobic and Hydrophilic Interactions Methionine - chemistry Models, Molecular Mutation Neoplasms - enzymology Phosphotransferases - physiology Protein Structure, Secondary Proto-Oncogene Proteins B-raf - genetics Proto-Oncogene Proteins c-abl - genetics Receptor, Epidermal Growth Factor - genetics |
title | Kinase Regulation by Hydrophobic Spine Assembly in Cancer |
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