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Modeling potato root growth and water uptake under water stress conditions
•We model root growth of potato and water uptake in response to drought.•Variation in root growth is mainly based on available carbon and soil water content.•Observed plant organ dry weights are matched well by the model.•Water balances of the soil–plant–atmosphere system are reproduced well. Potato...
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Published in: | Agricultural and forest meteorology 2014-08, Vol.194, p.37-49 |
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creator | Dathe, A. Fleisher, D.H. Timlin, D.J. Fisher, J.K. Reddy, V.R. |
description | •We model root growth of potato and water uptake in response to drought.•Variation in root growth is mainly based on available carbon and soil water content.•Observed plant organ dry weights are matched well by the model.•Water balances of the soil–plant–atmosphere system are reproduced well.
Potato (Solanum tuberosum L.) is considered a drought sensitive crop. Accurate simulation of root growth is critical for estimating water uptake dynamics. However, data required to build and test advanced potato root simulation approaches is lacking. Previously unpublished data from our soil–plant–atmosphere-research (SPAR) chambers was used to evaluate a new two-dimensional diffusive root growth module linked to the existing potato model SPUDSIM. The root module consisted of diffusive parameters controlling the direction of root growth in horizontal and vertical directions, and an additional convective term for vertical growth within the soil. This modified SPUDSIM was tested against observed SPAR data which consisted of root distribution in the soil profile and organ dry weights (DW) at harvest, plus daily water uptake patterns for each of six different irrigation treatments. The difference between simulated and observed DW data was within two standard errors for most plant organs—root DW was over-predicted for well-watered plants. Spatial and temporal patterns of root distribution and water contents were reproduced well. However, the model tended to over-estimate water uptake from soil layers closer to the surface. Differences in simulated root growth patterns among irrigation treatments were the result of fluctuations in soil water status, bulk density, and root density which, in turn, affected the amount of carbon allocated to the roots in different soil layers and the value of the convective term. These results suggest the new module will provide more reliable predictions of potato water uptake for improved agricultural decision support tools. |
doi_str_mv | 10.1016/j.agrformet.2014.03.011 |
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Potato (Solanum tuberosum L.) is considered a drought sensitive crop. Accurate simulation of root growth is critical for estimating water uptake dynamics. However, data required to build and test advanced potato root simulation approaches is lacking. Previously unpublished data from our soil–plant–atmosphere-research (SPAR) chambers was used to evaluate a new two-dimensional diffusive root growth module linked to the existing potato model SPUDSIM. The root module consisted of diffusive parameters controlling the direction of root growth in horizontal and vertical directions, and an additional convective term for vertical growth within the soil. This modified SPUDSIM was tested against observed SPAR data which consisted of root distribution in the soil profile and organ dry weights (DW) at harvest, plus daily water uptake patterns for each of six different irrigation treatments. The difference between simulated and observed DW data was within two standard errors for most plant organs—root DW was over-predicted for well-watered plants. Spatial and temporal patterns of root distribution and water contents were reproduced well. However, the model tended to over-estimate water uptake from soil layers closer to the surface. Differences in simulated root growth patterns among irrigation treatments were the result of fluctuations in soil water status, bulk density, and root density which, in turn, affected the amount of carbon allocated to the roots in different soil layers and the value of the convective term. These results suggest the new module will provide more reliable predictions of potato water uptake for improved agricultural decision support tools.</description><identifier>ISSN: 0168-1923</identifier><identifier>EISSN: 1873-2240</identifier><identifier>DOI: 10.1016/j.agrformet.2014.03.011</identifier><identifier>CODEN: AFMEEB</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Agricultural and forest climatology and meteorology. Irrigation. Drainage ; Agronomy. Soil science and plant productions ; Biological and medical sciences ; Computer simulation ; Construction ; Convective–diffusive root model ; Diffusion ; Drought ; Fundamental and applied biological sciences. Psychology ; General agronomy. Plant production ; Irrigation ; Modules ; Physical properties ; Physics, chemistry, biochemistry and biology of agricultural and forest soils ; Potato model ; Roots ; Soil (material) ; Soil science ; Soil water transport ; Solanum tuberosum ; Transpiration ; Uptakes ; Water and solute dynamics</subject><ispartof>Agricultural and forest meteorology, 2014-08, Vol.194, p.37-49</ispartof><rights>2014 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c411t-4948dbe1f25b06d5a0475f61511b19315333a71781d0819eabd8cac986744ef63</citedby><cites>FETCH-LOGICAL-c411t-4948dbe1f25b06d5a0475f61511b19315333a71781d0819eabd8cac986744ef63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28552107$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Dathe, A.</creatorcontrib><creatorcontrib>Fleisher, D.H.</creatorcontrib><creatorcontrib>Timlin, D.J.</creatorcontrib><creatorcontrib>Fisher, J.K.</creatorcontrib><creatorcontrib>Reddy, V.R.</creatorcontrib><title>Modeling potato root growth and water uptake under water stress conditions</title><title>Agricultural and forest meteorology</title><description>•We model root growth of potato and water uptake in response to drought.•Variation in root growth is mainly based on available carbon and soil water content.•Observed plant organ dry weights are matched well by the model.•Water balances of the soil–plant–atmosphere system are reproduced well.
Potato (Solanum tuberosum L.) is considered a drought sensitive crop. Accurate simulation of root growth is critical for estimating water uptake dynamics. However, data required to build and test advanced potato root simulation approaches is lacking. Previously unpublished data from our soil–plant–atmosphere-research (SPAR) chambers was used to evaluate a new two-dimensional diffusive root growth module linked to the existing potato model SPUDSIM. The root module consisted of diffusive parameters controlling the direction of root growth in horizontal and vertical directions, and an additional convective term for vertical growth within the soil. This modified SPUDSIM was tested against observed SPAR data which consisted of root distribution in the soil profile and organ dry weights (DW) at harvest, plus daily water uptake patterns for each of six different irrigation treatments. The difference between simulated and observed DW data was within two standard errors for most plant organs—root DW was over-predicted for well-watered plants. Spatial and temporal patterns of root distribution and water contents were reproduced well. However, the model tended to over-estimate water uptake from soil layers closer to the surface. Differences in simulated root growth patterns among irrigation treatments were the result of fluctuations in soil water status, bulk density, and root density which, in turn, affected the amount of carbon allocated to the roots in different soil layers and the value of the convective term. These results suggest the new module will provide more reliable predictions of potato water uptake for improved agricultural decision support tools.</description><subject>Agricultural and forest climatology and meteorology. Irrigation. Drainage</subject><subject>Agronomy. Soil science and plant productions</subject><subject>Biological and medical sciences</subject><subject>Computer simulation</subject><subject>Construction</subject><subject>Convective–diffusive root model</subject><subject>Diffusion</subject><subject>Drought</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General agronomy. Plant production</subject><subject>Irrigation</subject><subject>Modules</subject><subject>Physical properties</subject><subject>Physics, chemistry, biochemistry and biology of agricultural and forest soils</subject><subject>Potato model</subject><subject>Roots</subject><subject>Soil (material)</subject><subject>Soil science</subject><subject>Soil water transport</subject><subject>Solanum tuberosum</subject><subject>Transpiration</subject><subject>Uptakes</subject><subject>Water and solute dynamics</subject><issn>0168-1923</issn><issn>1873-2240</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkE1P4zAQhq0VK1G6-xvIBYlLwoztxMmxQnwKxGX3bLn2pOuSxsV2QfvvCWrFFU6jGT3vvNLD2ClChYDNxboyq9iHuKFccUBZgagA8QebYatEybmEIzabyLbEjotjdpLSGgC5Ut2M3T8GR4MfV8U2ZJNDEUPIxSqGt_yvMKMr3kymWOy22TxTsRvdtOxPKUdKqbBhdD77MKZf7GdvhkS_D3PO_l5f_bm8LR-ebu4uFw-llYi5lJ1s3ZKw5_USGlcbkKruG6wRl9gJrIUQRqFq0UGLHZmla62xXdsoKalvxJyd7_9uY3jZUcp645OlYTAjhV3S2EjOBYgGvoFy1SkQXE6o2qM2hpQi9Xob_cbE_xpBf4jWa_0pWn-I1iD0JHpKnh1KTLJm6KMZrU-fcd7WNUdQE7fYczTJefUUdbKeRkvOR7JZu-C_7HoHI82XeQ</recordid><startdate>20140815</startdate><enddate>20140815</enddate><creator>Dathe, A.</creator><creator>Fleisher, D.H.</creator><creator>Timlin, D.J.</creator><creator>Fisher, J.K.</creator><creator>Reddy, V.R.</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7ST</scope><scope>7TG</scope><scope>7UA</scope><scope>C1K</scope><scope>KL.</scope><scope>SOI</scope><scope>8FD</scope><scope>FR3</scope><scope>H8D</scope><scope>KR7</scope><scope>L7M</scope></search><sort><creationdate>20140815</creationdate><title>Modeling potato root growth and water uptake under water stress conditions</title><author>Dathe, A. ; Fleisher, D.H. ; Timlin, D.J. ; Fisher, J.K. ; Reddy, V.R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c411t-4948dbe1f25b06d5a0475f61511b19315333a71781d0819eabd8cac986744ef63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Agricultural and forest climatology and meteorology. Irrigation. Drainage</topic><topic>Agronomy. Soil science and plant productions</topic><topic>Biological and medical sciences</topic><topic>Computer simulation</topic><topic>Construction</topic><topic>Convective–diffusive root model</topic><topic>Diffusion</topic><topic>Drought</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General agronomy. Plant production</topic><topic>Irrigation</topic><topic>Modules</topic><topic>Physical properties</topic><topic>Physics, chemistry, biochemistry and biology of agricultural and forest soils</topic><topic>Potato model</topic><topic>Roots</topic><topic>Soil (material)</topic><topic>Soil science</topic><topic>Soil water transport</topic><topic>Solanum tuberosum</topic><topic>Transpiration</topic><topic>Uptakes</topic><topic>Water and solute dynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dathe, A.</creatorcontrib><creatorcontrib>Fleisher, D.H.</creatorcontrib><creatorcontrib>Timlin, D.J.</creatorcontrib><creatorcontrib>Fisher, J.K.</creatorcontrib><creatorcontrib>Reddy, V.R.</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Environment Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Meteorological & Geoastrophysical Abstracts - Academic</collection><collection>Environment Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Agricultural and forest meteorology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dathe, A.</au><au>Fleisher, D.H.</au><au>Timlin, D.J.</au><au>Fisher, J.K.</au><au>Reddy, V.R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modeling potato root growth and water uptake under water stress conditions</atitle><jtitle>Agricultural and forest meteorology</jtitle><date>2014-08-15</date><risdate>2014</risdate><volume>194</volume><spage>37</spage><epage>49</epage><pages>37-49</pages><issn>0168-1923</issn><eissn>1873-2240</eissn><coden>AFMEEB</coden><abstract>•We model root growth of potato and water uptake in response to drought.•Variation in root growth is mainly based on available carbon and soil water content.•Observed plant organ dry weights are matched well by the model.•Water balances of the soil–plant–atmosphere system are reproduced well.
Potato (Solanum tuberosum L.) is considered a drought sensitive crop. Accurate simulation of root growth is critical for estimating water uptake dynamics. However, data required to build and test advanced potato root simulation approaches is lacking. Previously unpublished data from our soil–plant–atmosphere-research (SPAR) chambers was used to evaluate a new two-dimensional diffusive root growth module linked to the existing potato model SPUDSIM. The root module consisted of diffusive parameters controlling the direction of root growth in horizontal and vertical directions, and an additional convective term for vertical growth within the soil. This modified SPUDSIM was tested against observed SPAR data which consisted of root distribution in the soil profile and organ dry weights (DW) at harvest, plus daily water uptake patterns for each of six different irrigation treatments. The difference between simulated and observed DW data was within two standard errors for most plant organs—root DW was over-predicted for well-watered plants. Spatial and temporal patterns of root distribution and water contents were reproduced well. However, the model tended to over-estimate water uptake from soil layers closer to the surface. Differences in simulated root growth patterns among irrigation treatments were the result of fluctuations in soil water status, bulk density, and root density which, in turn, affected the amount of carbon allocated to the roots in different soil layers and the value of the convective term. These results suggest the new module will provide more reliable predictions of potato water uptake for improved agricultural decision support tools.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><doi>10.1016/j.agrformet.2014.03.011</doi><tpages>13</tpages></addata></record> |
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subjects | Agricultural and forest climatology and meteorology. Irrigation. Drainage Agronomy. Soil science and plant productions Biological and medical sciences Computer simulation Construction Convective–diffusive root model Diffusion Drought Fundamental and applied biological sciences. Psychology General agronomy. Plant production Irrigation Modules Physical properties Physics, chemistry, biochemistry and biology of agricultural and forest soils Potato model Roots Soil (material) Soil science Soil water transport Solanum tuberosum Transpiration Uptakes Water and solute dynamics |
title | Modeling potato root growth and water uptake under water stress conditions |
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