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Molecular cloning and expression of a cDNA sequence encoding histidinol phosphate aminotransferase from Nicotiana tabacum
A Nicotiana tabacum cDNA sequence encoding histidinol phosphate aminotransferase (HPA) was isolated by functional complementation of an Escherichia coli histidine auxotroph (UTH780). The enzymatic assay has confirmed that the isolated cDNA encodes a functional HPA protein. Amino acid sequence alignm...
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Published in: | Plant molecular biology 1998-08, Vol.37 (6), p.1013-1022 |
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container_title | Plant molecular biology |
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creator | El-Malki, F. (Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). Lab. for Plant Genetics) Frankard, V Jacobs, M |
description | A Nicotiana tabacum cDNA sequence encoding histidinol phosphate aminotransferase (HPA) was isolated by functional complementation of an Escherichia coli histidine auxotroph (UTH780). The enzymatic assay has confirmed that the isolated cDNA encodes a functional HPA protein. Amino acid sequence alignment of the HPA protein from N. tabacum, Saccharomyces cerevisiae and E. coli revealed that, despite the low degree of identity, some residues were found to be highly conserved. The predicted protein contains a transit peptide sequence at the amino-terminal end, suggesting a chloroplastic localization of the HPA enzyme. Western blot analysis demonstrated that the deduced HPA protein and the mature HPA protein have an apparent molecular mass of about 45 kDa and 40 kDa respectively. Gene copy number estimation by Southern analysis indicates the presence of at least two genes per haploid genome coding for this protein in Nicotiana sp. From northern analysis results, the gene seems to be highly expressed in green tissues and the detected transcript showed a single band of expected molecular size. |
doi_str_mv | 10.1023/A:1006007125448 |
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(Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). Lab. for Plant Genetics) ; Frankard, V ; Jacobs, M</creator><creatorcontrib>El-Malki, F. (Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). Lab. for Plant Genetics) ; Frankard, V ; Jacobs, M</creatorcontrib><description>A Nicotiana tabacum cDNA sequence encoding histidinol phosphate aminotransferase (HPA) was isolated by functional complementation of an Escherichia coli histidine auxotroph (UTH780). The enzymatic assay has confirmed that the isolated cDNA encodes a functional HPA protein. Amino acid sequence alignment of the HPA protein from N. tabacum, Saccharomyces cerevisiae and E. coli revealed that, despite the low degree of identity, some residues were found to be highly conserved. The predicted protein contains a transit peptide sequence at the amino-terminal end, suggesting a chloroplastic localization of the HPA enzyme. Western blot analysis demonstrated that the deduced HPA protein and the mature HPA protein have an apparent molecular mass of about 45 kDa and 40 kDa respectively. Gene copy number estimation by Southern analysis indicates the presence of at least two genes per haploid genome coding for this protein in Nicotiana sp. From northern analysis results, the gene seems to be highly expressed in green tissues and the detected transcript showed a single band of expected molecular size.</description><identifier>ISSN: 0167-4412</identifier><identifier>EISSN: 1573-5028</identifier><identifier>DOI: 10.1023/A:1006007125448</identifier><identifier>PMID: 9700073</identifier><language>eng</language><publisher>Netherlands: Springer Nature B.V</publisher><subject>ADN ; Amino Acid Sequence ; Amino acids ; AMINOTRANSFERASAS ; AMINOTRANSFERASE ; AMINOTRANSFERASES ; Base Sequence ; CLONACION MOLECULAR ; CLONAGE MOLECULAIRE ; Cloning ; Cloning, Molecular ; DNA ; DNA, Complementary ; E coli ; Enzymes ; Escherichia coli - genetics ; EXPRESION GENICA ; EXPRESSION DES GENES ; GENE EXPRESSION ; Gene Library ; Genes, Plant ; Genetic Complementation Test ; Histidine - biosynthesis ; MOLECULAR CLONING ; Molecular Sequence Data ; Nicotiana - enzymology ; Nicotiana - genetics ; NICOTIANA TABACUM ; NUCLEOTIDE SEQUENCE ; Plants, Toxic ; Recombinant Proteins - biosynthesis ; RNA, Messenger - genetics ; RNA, Plant - genetics ; SECUENCIA NUCLEOTIDICA ; Sequence Analysis, DNA ; Sequence Homology, Amino Acid ; SEQUENCE NUCLEOTIDIQUE ; Transaminases - biosynthesis ; Transaminases - genetics</subject><ispartof>Plant molecular biology, 1998-08, Vol.37 (6), p.1013-1022</ispartof><rights>Kluwer Academic Publishers 1998</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c264t-fc2374154b98772f9cccb7a166f5ad46fd24c60982c87043f90a16436e7d3b3e3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9700073$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>El-Malki, F. (Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). Lab. for Plant Genetics)</creatorcontrib><creatorcontrib>Frankard, V</creatorcontrib><creatorcontrib>Jacobs, M</creatorcontrib><title>Molecular cloning and expression of a cDNA sequence encoding histidinol phosphate aminotransferase from Nicotiana tabacum</title><title>Plant molecular biology</title><addtitle>Plant Mol Biol</addtitle><description>A Nicotiana tabacum cDNA sequence encoding histidinol phosphate aminotransferase (HPA) was isolated by functional complementation of an Escherichia coli histidine auxotroph (UTH780). The enzymatic assay has confirmed that the isolated cDNA encodes a functional HPA protein. Amino acid sequence alignment of the HPA protein from N. tabacum, Saccharomyces cerevisiae and E. coli revealed that, despite the low degree of identity, some residues were found to be highly conserved. The predicted protein contains a transit peptide sequence at the amino-terminal end, suggesting a chloroplastic localization of the HPA enzyme. Western blot analysis demonstrated that the deduced HPA protein and the mature HPA protein have an apparent molecular mass of about 45 kDa and 40 kDa respectively. Gene copy number estimation by Southern analysis indicates the presence of at least two genes per haploid genome coding for this protein in Nicotiana sp. From northern analysis results, the gene seems to be highly expressed in green tissues and the detected transcript showed a single band of expected molecular size.</description><subject>ADN</subject><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>AMINOTRANSFERASAS</subject><subject>AMINOTRANSFERASE</subject><subject>AMINOTRANSFERASES</subject><subject>Base Sequence</subject><subject>CLONACION MOLECULAR</subject><subject>CLONAGE MOLECULAIRE</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>DNA</subject><subject>DNA, Complementary</subject><subject>E coli</subject><subject>Enzymes</subject><subject>Escherichia coli - genetics</subject><subject>EXPRESION GENICA</subject><subject>EXPRESSION DES GENES</subject><subject>GENE EXPRESSION</subject><subject>Gene Library</subject><subject>Genes, Plant</subject><subject>Genetic Complementation Test</subject><subject>Histidine - biosynthesis</subject><subject>MOLECULAR CLONING</subject><subject>Molecular Sequence Data</subject><subject>Nicotiana - enzymology</subject><subject>Nicotiana - genetics</subject><subject>NICOTIANA TABACUM</subject><subject>NUCLEOTIDE SEQUENCE</subject><subject>Plants, Toxic</subject><subject>Recombinant Proteins - biosynthesis</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Plant - genetics</subject><subject>SECUENCIA NUCLEOTIDICA</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Amino Acid</subject><subject>SEQUENCE NUCLEOTIDIQUE</subject><subject>Transaminases - biosynthesis</subject><subject>Transaminases - genetics</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNpdkU1r3DAQhkVo2G7SnHsqiB56c6IvS1ZvS9J8wGZzac5mLEu7CrbkSjYk_z4qWSj0MjPM-8zwMoPQV0ouKWH8avOTEiIJUZTVQjQnaE1rxauasOYTWhMqVSUEZZ_RWc4vhBSYyxVaaUXKDF-jt8c4WLMMkLAZYvBhjyH02L5OyebsY8DRYcDmZrfB2f5ZbDAWlxD7v-jB59mXKg54OsQ8HWC2GMbSmBOE7GyCbLFLccQ7b-LsIQCeoQOzjF_QqYMh24tjPkfPt79-X99X26e7h-vNtjJMirlyhnElaC063SjFnDbGdAqolK6GXkjXM2Ek0Q0zjSKCO02KKLi0qucdt_wc_fjYO6VY_Oe5HX02dhgg2LjktsBaKMkL-P0_8CUuKRRvrZK6rjXTskDfjtDSjbZvp-RHSG_t8aD_dAexhX3yud1tqdZN-RIVlL8DkSuBRg</recordid><startdate>19980801</startdate><enddate>19980801</enddate><creator>El-Malki, F. 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Lab. for Plant Genetics) ; Frankard, V ; Jacobs, M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c264t-fc2374154b98772f9cccb7a166f5ad46fd24c60982c87043f90a16436e7d3b3e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>ADN</topic><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>AMINOTRANSFERASAS</topic><topic>AMINOTRANSFERASE</topic><topic>AMINOTRANSFERASES</topic><topic>Base Sequence</topic><topic>CLONACION MOLECULAR</topic><topic>CLONAGE MOLECULAIRE</topic><topic>Cloning</topic><topic>Cloning, Molecular</topic><topic>DNA</topic><topic>DNA, Complementary</topic><topic>E coli</topic><topic>Enzymes</topic><topic>Escherichia coli - genetics</topic><topic>EXPRESION GENICA</topic><topic>EXPRESSION DES GENES</topic><topic>GENE EXPRESSION</topic><topic>Gene Library</topic><topic>Genes, Plant</topic><topic>Genetic Complementation Test</topic><topic>Histidine - biosynthesis</topic><topic>MOLECULAR CLONING</topic><topic>Molecular Sequence Data</topic><topic>Nicotiana - enzymology</topic><topic>Nicotiana - genetics</topic><topic>NICOTIANA TABACUM</topic><topic>NUCLEOTIDE SEQUENCE</topic><topic>Plants, Toxic</topic><topic>Recombinant Proteins - biosynthesis</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Plant - genetics</topic><topic>SECUENCIA NUCLEOTIDICA</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Amino Acid</topic><topic>SEQUENCE NUCLEOTIDIQUE</topic><topic>Transaminases - biosynthesis</topic><topic>Transaminases - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>El-Malki, F. (Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). 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(Vrije Univ. Brussel, Sint-Genesius Rode (Belgium). Lab. for Plant Genetics)</au><au>Frankard, V</au><au>Jacobs, M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular cloning and expression of a cDNA sequence encoding histidinol phosphate aminotransferase from Nicotiana tabacum</atitle><jtitle>Plant molecular biology</jtitle><addtitle>Plant Mol Biol</addtitle><date>1998-08-01</date><risdate>1998</risdate><volume>37</volume><issue>6</issue><spage>1013</spage><epage>1022</epage><pages>1013-1022</pages><issn>0167-4412</issn><eissn>1573-5028</eissn><abstract>A Nicotiana tabacum cDNA sequence encoding histidinol phosphate aminotransferase (HPA) was isolated by functional complementation of an Escherichia coli histidine auxotroph (UTH780). The enzymatic assay has confirmed that the isolated cDNA encodes a functional HPA protein. Amino acid sequence alignment of the HPA protein from N. tabacum, Saccharomyces cerevisiae and E. coli revealed that, despite the low degree of identity, some residues were found to be highly conserved. The predicted protein contains a transit peptide sequence at the amino-terminal end, suggesting a chloroplastic localization of the HPA enzyme. Western blot analysis demonstrated that the deduced HPA protein and the mature HPA protein have an apparent molecular mass of about 45 kDa and 40 kDa respectively. Gene copy number estimation by Southern analysis indicates the presence of at least two genes per haploid genome coding for this protein in Nicotiana sp. From northern analysis results, the gene seems to be highly expressed in green tissues and the detected transcript showed a single band of expected molecular size.</abstract><cop>Netherlands</cop><pub>Springer Nature B.V</pub><pmid>9700073</pmid><doi>10.1023/A:1006007125448</doi><tpages>10</tpages></addata></record> |
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subjects | ADN Amino Acid Sequence Amino acids AMINOTRANSFERASAS AMINOTRANSFERASE AMINOTRANSFERASES Base Sequence CLONACION MOLECULAR CLONAGE MOLECULAIRE Cloning Cloning, Molecular DNA DNA, Complementary E coli Enzymes Escherichia coli - genetics EXPRESION GENICA EXPRESSION DES GENES GENE EXPRESSION Gene Library Genes, Plant Genetic Complementation Test Histidine - biosynthesis MOLECULAR CLONING Molecular Sequence Data Nicotiana - enzymology Nicotiana - genetics NICOTIANA TABACUM NUCLEOTIDE SEQUENCE Plants, Toxic Recombinant Proteins - biosynthesis RNA, Messenger - genetics RNA, Plant - genetics SECUENCIA NUCLEOTIDICA Sequence Analysis, DNA Sequence Homology, Amino Acid SEQUENCE NUCLEOTIDIQUE Transaminases - biosynthesis Transaminases - genetics |
title | Molecular cloning and expression of a cDNA sequence encoding histidinol phosphate aminotransferase from Nicotiana tabacum |
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