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Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach
•Uncertainty of carbon fluxes at regional and global scales has rarely been quantified.•We use a model-data fusion approach to assess uncertainty in parameters and fluxes.•Parameter values vary substantially both within and across plant functional types.•Our approach can provide uncertainty bounds t...
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Published in: | Agricultural and forest meteorology 2014-06, Vol.189-190, p.175-186 |
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creator | Xiao, Jingfeng Davis, Kenneth J. Urban, Nathan M. Keller, Klaus |
description | •Uncertainty of carbon fluxes at regional and global scales has rarely been quantified.•We use a model-data fusion approach to assess uncertainty in parameters and fluxes.•Parameter values vary substantially both within and across plant functional types.•Our approach can provide uncertainty bounds to regional carbon flux estimates.•Parameter uncertainty can lead to a large uncertainty in regional carbon fluxes.
Models have been widely used to estimate carbon fluxes at regional scales, and the uncertainty of modeled fluxes, however, has rarely been quantified and remains a challenge. A quantitative uncertainty assessment of regional flux estimates is essential for better understanding of terrestrial carbon dynamics and informing carbon and climate decision-making. We use a simple ecosystem model, eddy covariance (EC) flux observations, and a model-data fusion approach to assess the uncertainty of regional carbon flux estimates for the Upper Midwest region of northern Wisconsin and Michigan, USA. We combine net ecosystem exchange (NEE) observations and an adaptive Markov chain Monte Carlo (MCMC) approach to quantify the parameter uncertainty of the Diagnostic Carbon Flux Model (DCFM). Our MCMC approach eliminates the need for an initial equilibration or “burn-in” phase of the random walk, and also improves the performance of the algorithm for parameter optimization. For each plant functional type (PFT), we use NEE observations from multiple EC sites to estimate parameters, and the resulting parameter estimates are more representative of the PFT than estimates based on observations from a single site. A probability density function (PDF) is generated for each parameter, and the spread of the PDF provides an estimate of parameter uncertainty. We then apply the model with parameter PDFs to estimate NEE for each grid cell across our study region, and propagate the parameter uncertainty through simulations to produce probabilistic flux estimates. Over the period from 2001 to 2007, the mean annual NEE of the region was estimated to be −30.0TgCyr−1, and the associated uncertainty as measured by standard deviation was±7.6TgCyr−1. Uncertainty in parameters can lead to a large uncertainty to estimates of regional carbon fluxes, and our model-data approach can provide uncertainty bounds to regional carbon fluxes. Future research is needed to apply our approach to more complex ecosystem models, assess the usefulness, validity, and alternatives of the PFT and vegetation |
doi_str_mv | 10.1016/j.agrformet.2014.01.022 |
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Models have been widely used to estimate carbon fluxes at regional scales, and the uncertainty of modeled fluxes, however, has rarely been quantified and remains a challenge. A quantitative uncertainty assessment of regional flux estimates is essential for better understanding of terrestrial carbon dynamics and informing carbon and climate decision-making. We use a simple ecosystem model, eddy covariance (EC) flux observations, and a model-data fusion approach to assess the uncertainty of regional carbon flux estimates for the Upper Midwest region of northern Wisconsin and Michigan, USA. We combine net ecosystem exchange (NEE) observations and an adaptive Markov chain Monte Carlo (MCMC) approach to quantify the parameter uncertainty of the Diagnostic Carbon Flux Model (DCFM). Our MCMC approach eliminates the need for an initial equilibration or “burn-in” phase of the random walk, and also improves the performance of the algorithm for parameter optimization. For each plant functional type (PFT), we use NEE observations from multiple EC sites to estimate parameters, and the resulting parameter estimates are more representative of the PFT than estimates based on observations from a single site. A probability density function (PDF) is generated for each parameter, and the spread of the PDF provides an estimate of parameter uncertainty. We then apply the model with parameter PDFs to estimate NEE for each grid cell across our study region, and propagate the parameter uncertainty through simulations to produce probabilistic flux estimates. Over the period from 2001 to 2007, the mean annual NEE of the region was estimated to be −30.0TgCyr−1, and the associated uncertainty as measured by standard deviation was±7.6TgCyr−1. Uncertainty in parameters can lead to a large uncertainty to estimates of regional carbon fluxes, and our model-data approach can provide uncertainty bounds to regional carbon fluxes. Future research is needed to apply our approach to more complex ecosystem models, assess the usefulness, validity, and alternatives of the PFT and vegetation type concepts, and to fully quantify the uncertainty of regional carbon fluxes by incorporating other sources of uncertainty.</description><identifier>ISSN: 0168-1923</identifier><identifier>EISSN: 1873-2240</identifier><identifier>DOI: 10.1016/j.agrformet.2014.01.022</identifier><identifier>CODEN: AFMEEB</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Agricultural and forest climatology and meteorology. Irrigation. Drainage ; Agronomy. Soil science and plant productions ; Animal and plant ecology ; Animal, plant and microbial ecology ; Biological and medical sciences ; Carbon ; Carbon cycle ; Data assimilation ; Ecosystem model ; Ecosystems ; Estimates ; Fluxes ; Fundamental and applied biological sciences. Psychology ; General agronomy. Plant production ; Light use efficiency ; Mathematical models ; Model-data fusion ; Probability density functions ; Regional ; Synecology ; Uncertainty</subject><ispartof>Agricultural and forest meteorology, 2014-06, Vol.189-190, p.175-186</ispartof><rights>2014 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c411t-2aa95cc6f46f78771891f51c8b30f5b3270a626a001cf913ebbb515e269915f03</citedby><cites>FETCH-LOGICAL-c411t-2aa95cc6f46f78771891f51c8b30f5b3270a626a001cf913ebbb515e269915f03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28322090$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Xiao, Jingfeng</creatorcontrib><creatorcontrib>Davis, Kenneth J.</creatorcontrib><creatorcontrib>Urban, Nathan M.</creatorcontrib><creatorcontrib>Keller, Klaus</creatorcontrib><title>Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach</title><title>Agricultural and forest meteorology</title><description>•Uncertainty of carbon fluxes at regional and global scales has rarely been quantified.•We use a model-data fusion approach to assess uncertainty in parameters and fluxes.•Parameter values vary substantially both within and across plant functional types.•Our approach can provide uncertainty bounds to regional carbon flux estimates.•Parameter uncertainty can lead to a large uncertainty in regional carbon fluxes.
Models have been widely used to estimate carbon fluxes at regional scales, and the uncertainty of modeled fluxes, however, has rarely been quantified and remains a challenge. A quantitative uncertainty assessment of regional flux estimates is essential for better understanding of terrestrial carbon dynamics and informing carbon and climate decision-making. We use a simple ecosystem model, eddy covariance (EC) flux observations, and a model-data fusion approach to assess the uncertainty of regional carbon flux estimates for the Upper Midwest region of northern Wisconsin and Michigan, USA. We combine net ecosystem exchange (NEE) observations and an adaptive Markov chain Monte Carlo (MCMC) approach to quantify the parameter uncertainty of the Diagnostic Carbon Flux Model (DCFM). Our MCMC approach eliminates the need for an initial equilibration or “burn-in” phase of the random walk, and also improves the performance of the algorithm for parameter optimization. For each plant functional type (PFT), we use NEE observations from multiple EC sites to estimate parameters, and the resulting parameter estimates are more representative of the PFT than estimates based on observations from a single site. A probability density function (PDF) is generated for each parameter, and the spread of the PDF provides an estimate of parameter uncertainty. We then apply the model with parameter PDFs to estimate NEE for each grid cell across our study region, and propagate the parameter uncertainty through simulations to produce probabilistic flux estimates. Over the period from 2001 to 2007, the mean annual NEE of the region was estimated to be −30.0TgCyr−1, and the associated uncertainty as measured by standard deviation was±7.6TgCyr−1. Uncertainty in parameters can lead to a large uncertainty to estimates of regional carbon fluxes, and our model-data approach can provide uncertainty bounds to regional carbon fluxes. Future research is needed to apply our approach to more complex ecosystem models, assess the usefulness, validity, and alternatives of the PFT and vegetation type concepts, and to fully quantify the uncertainty of regional carbon fluxes by incorporating other sources of uncertainty.</description><subject>Agricultural and forest climatology and meteorology. Irrigation. Drainage</subject><subject>Agronomy. Soil science and plant productions</subject><subject>Animal and plant ecology</subject><subject>Animal, plant and microbial ecology</subject><subject>Biological and medical sciences</subject><subject>Carbon</subject><subject>Carbon cycle</subject><subject>Data assimilation</subject><subject>Ecosystem model</subject><subject>Ecosystems</subject><subject>Estimates</subject><subject>Fluxes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General agronomy. Plant production</subject><subject>Light use efficiency</subject><subject>Mathematical models</subject><subject>Model-data fusion</subject><subject>Probability density functions</subject><subject>Regional</subject><subject>Synecology</subject><subject>Uncertainty</subject><issn>0168-1923</issn><issn>1873-2240</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkcFq3DAQhkVJoJtNniG6FHKxq5Ety-ptCUlbCPTSQG9iLI9SLV57K9kh-_bVskuu7Wku3_z_8A1jtyBKENB83pb4Ev0UdzSXUkBdCiiFlB_YClpdFVLW4oKtMtkWYGT1kV2ltBUCpNZmxX49j47ijGGcDzyMfDf1NPA9Rsx5FBPHseeRXsI04sAdxm4auR-WN0pf-OaEFz3OyP2SMsRxv48Tut_X7NLjkOjmPNfs-fHh5_234unH1-_3m6fC1QBzIRGNcq7xdeN1qzW0BrwC13aV8KqrpBbYyAbzwc4bqKjrOgWKZGMMKC-qNbs75ebaPwul2e5CcjQMONK0JAuNglpKZZr_QCslQKsaMqpPqItTSpG83ceww3iwIOxRu93ad-32qN0KsFl73vx0LsHkcPARRxfS-7psKymFOd69OXGU5bwGija5QPkZfYjkZttP4Z9dfwEi_Zwm</recordid><startdate>20140601</startdate><enddate>20140601</enddate><creator>Xiao, Jingfeng</creator><creator>Davis, Kenneth J.</creator><creator>Urban, Nathan M.</creator><creator>Keller, Klaus</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TG</scope><scope>7UA</scope><scope>C1K</scope><scope>KL.</scope><scope>7U5</scope><scope>8FD</scope><scope>FR3</scope><scope>H8D</scope><scope>KR7</scope><scope>L7M</scope></search><sort><creationdate>20140601</creationdate><title>Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach</title><author>Xiao, Jingfeng ; Davis, Kenneth J. ; Urban, Nathan M. ; Keller, Klaus</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c411t-2aa95cc6f46f78771891f51c8b30f5b3270a626a001cf913ebbb515e269915f03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Agricultural and forest climatology and meteorology. Irrigation. Drainage</topic><topic>Agronomy. Soil science and plant productions</topic><topic>Animal and plant ecology</topic><topic>Animal, plant and microbial ecology</topic><topic>Biological and medical sciences</topic><topic>Carbon</topic><topic>Carbon cycle</topic><topic>Data assimilation</topic><topic>Ecosystem model</topic><topic>Ecosystems</topic><topic>Estimates</topic><topic>Fluxes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General agronomy. Plant production</topic><topic>Light use efficiency</topic><topic>Mathematical models</topic><topic>Model-data fusion</topic><topic>Probability density functions</topic><topic>Regional</topic><topic>Synecology</topic><topic>Uncertainty</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xiao, Jingfeng</creatorcontrib><creatorcontrib>Davis, Kenneth J.</creatorcontrib><creatorcontrib>Urban, Nathan M.</creatorcontrib><creatorcontrib>Keller, Klaus</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Meteorological & Geoastrophysical Abstracts - Academic</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Agricultural and forest meteorology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xiao, Jingfeng</au><au>Davis, Kenneth J.</au><au>Urban, Nathan M.</au><au>Keller, Klaus</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach</atitle><jtitle>Agricultural and forest meteorology</jtitle><date>2014-06-01</date><risdate>2014</risdate><volume>189-190</volume><spage>175</spage><epage>186</epage><pages>175-186</pages><issn>0168-1923</issn><eissn>1873-2240</eissn><coden>AFMEEB</coden><abstract>•Uncertainty of carbon fluxes at regional and global scales has rarely been quantified.•We use a model-data fusion approach to assess uncertainty in parameters and fluxes.•Parameter values vary substantially both within and across plant functional types.•Our approach can provide uncertainty bounds to regional carbon flux estimates.•Parameter uncertainty can lead to a large uncertainty in regional carbon fluxes.
Models have been widely used to estimate carbon fluxes at regional scales, and the uncertainty of modeled fluxes, however, has rarely been quantified and remains a challenge. A quantitative uncertainty assessment of regional flux estimates is essential for better understanding of terrestrial carbon dynamics and informing carbon and climate decision-making. We use a simple ecosystem model, eddy covariance (EC) flux observations, and a model-data fusion approach to assess the uncertainty of regional carbon flux estimates for the Upper Midwest region of northern Wisconsin and Michigan, USA. We combine net ecosystem exchange (NEE) observations and an adaptive Markov chain Monte Carlo (MCMC) approach to quantify the parameter uncertainty of the Diagnostic Carbon Flux Model (DCFM). Our MCMC approach eliminates the need for an initial equilibration or “burn-in” phase of the random walk, and also improves the performance of the algorithm for parameter optimization. For each plant functional type (PFT), we use NEE observations from multiple EC sites to estimate parameters, and the resulting parameter estimates are more representative of the PFT than estimates based on observations from a single site. A probability density function (PDF) is generated for each parameter, and the spread of the PDF provides an estimate of parameter uncertainty. We then apply the model with parameter PDFs to estimate NEE for each grid cell across our study region, and propagate the parameter uncertainty through simulations to produce probabilistic flux estimates. Over the period from 2001 to 2007, the mean annual NEE of the region was estimated to be −30.0TgCyr−1, and the associated uncertainty as measured by standard deviation was±7.6TgCyr−1. Uncertainty in parameters can lead to a large uncertainty to estimates of regional carbon fluxes, and our model-data approach can provide uncertainty bounds to regional carbon fluxes. Future research is needed to apply our approach to more complex ecosystem models, assess the usefulness, validity, and alternatives of the PFT and vegetation type concepts, and to fully quantify the uncertainty of regional carbon fluxes by incorporating other sources of uncertainty.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><doi>10.1016/j.agrformet.2014.01.022</doi><tpages>12</tpages></addata></record> |
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subjects | Agricultural and forest climatology and meteorology. Irrigation. Drainage Agronomy. Soil science and plant productions Animal and plant ecology Animal, plant and microbial ecology Biological and medical sciences Carbon Carbon cycle Data assimilation Ecosystem model Ecosystems Estimates Fluxes Fundamental and applied biological sciences. Psychology General agronomy. Plant production Light use efficiency Mathematical models Model-data fusion Probability density functions Regional Synecology Uncertainty |
title | Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach |
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