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Identification of the Hydrophobic Amino Acid Residues Required for Heme Assembly in the Rhizobial Oxygen Sensor Protein FixL
Rhizobial FixL is a novel heme protein, which senses environmental oxygen tension and directs signal transduction via protein phosphotransfer. To identify the essential residues for heme assembly inRhizobium melilotiFixL, we individually replaced the 18 invariant hydrophobic amino acid residues (F,...
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Published in: | Biochemical and biophysical research communications 1998-06, Vol.247 (2), p.427-431 |
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container_title | Biochemical and biophysical research communications |
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creator | Nakamura, Hiro Saito, Ken Ito, Eiichi Tamura, Koji Tsuchiya, Terumasa Nishigaki, Koichi Shiro, Yoshitsugu Iizuka, Tetsutaro |
description | Rhizobial FixL is a novel heme protein, which senses environmental oxygen tension and directs signal transduction via protein phosphotransfer. To identify the essential residues for heme assembly inRhizobium melilotiFixL, we individually replaced the 18 invariant hydrophobic amino acid residues (F, I, L, and V) in the heme-containing domain with alanine and histidine. Spectroscopic measurements of the soluble fractions fromfixLrecombinantEscherichia colirevealed that V152, F162, F170, I172, L185, F226, L230, and F243 as well as the proximal ligand H194 were indispensable for heme assembly. Autoxidation rates of purified I209H, I210A, and I210H were 65-fold, 15-fold, and 15-fold, respectively, faster than that of the wild type, although they retained heme in the protein. The absorption peak in the Soret region of the ferric I209H or I210H was red-shifted, suggesting that the ferric heme is a hexa-coordinate form in these mutants. |
doi_str_mv | 10.1006/bbrc.1998.8694 |
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To identify the essential residues for heme assembly inRhizobium melilotiFixL, we individually replaced the 18 invariant hydrophobic amino acid residues (F, I, L, and V) in the heme-containing domain with alanine and histidine. Spectroscopic measurements of the soluble fractions fromfixLrecombinantEscherichia colirevealed that V152, F162, F170, I172, L185, F226, L230, and F243 as well as the proximal ligand H194 were indispensable for heme assembly. Autoxidation rates of purified I209H, I210A, and I210H were 65-fold, 15-fold, and 15-fold, respectively, faster than that of the wild type, although they retained heme in the protein. The absorption peak in the Soret region of the ferric I209H or I210H was red-shifted, suggesting that the ferric heme is a hexa-coordinate form in these mutants.</description><identifier>ISSN: 0006-291X</identifier><identifier>EISSN: 1090-2104</identifier><identifier>DOI: 10.1006/bbrc.1998.8694</identifier><identifier>PMID: 9642144</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>ACIDE AMINE ; Amino Acid Sequence ; AMINO ACIDS ; AMINOACIDOS ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Base Sequence ; Binding Sites - genetics ; DNA, Bacterial - genetics ; Escherichia coli ; Escherichia coli - genetics ; Heme - chemistry ; Hemeproteins - chemistry ; Hemeproteins - genetics ; Hemeproteins - metabolism ; IDENTIFICACION ; IDENTIFICATION ; Kinetics ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Oxidation-Reduction ; Oxygen - metabolism ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; RHIZOBIUM MELILOTI ; Signal Transduction ; Sinorhizobium meliloti - genetics ; Sinorhizobium meliloti - metabolism</subject><ispartof>Biochemical and biophysical research communications, 1998-06, Vol.247 (2), p.427-431</ispartof><rights>1998 Academic Press</rights><rights>Copyright 1998 Academic Press.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c458t-7e1d100af512ae2a3821950fb4d3861a21f26bf42f3a47f11cae5ccd26c67a673</citedby><cites>FETCH-LOGICAL-c458t-7e1d100af512ae2a3821950fb4d3861a21f26bf42f3a47f11cae5ccd26c67a673</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9642144$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nakamura, Hiro</creatorcontrib><creatorcontrib>Saito, Ken</creatorcontrib><creatorcontrib>Ito, Eiichi</creatorcontrib><creatorcontrib>Tamura, Koji</creatorcontrib><creatorcontrib>Tsuchiya, Terumasa</creatorcontrib><creatorcontrib>Nishigaki, Koichi</creatorcontrib><creatorcontrib>Shiro, Yoshitsugu</creatorcontrib><creatorcontrib>Iizuka, Tetsutaro</creatorcontrib><title>Identification of the Hydrophobic Amino Acid Residues Required for Heme Assembly in the Rhizobial Oxygen Sensor Protein FixL</title><title>Biochemical and biophysical research communications</title><addtitle>Biochem Biophys Res Commun</addtitle><description>Rhizobial FixL is a novel heme protein, which senses environmental oxygen tension and directs signal transduction via protein phosphotransfer. To identify the essential residues for heme assembly inRhizobium melilotiFixL, we individually replaced the 18 invariant hydrophobic amino acid residues (F, I, L, and V) in the heme-containing domain with alanine and histidine. Spectroscopic measurements of the soluble fractions fromfixLrecombinantEscherichia colirevealed that V152, F162, F170, I172, L185, F226, L230, and F243 as well as the proximal ligand H194 were indispensable for heme assembly. Autoxidation rates of purified I209H, I210A, and I210H were 65-fold, 15-fold, and 15-fold, respectively, faster than that of the wild type, although they retained heme in the protein. The absorption peak in the Soret region of the ferric I209H or I210H was red-shifted, suggesting that the ferric heme is a hexa-coordinate form in these mutants.</description><subject>ACIDE AMINE</subject><subject>Amino Acid Sequence</subject><subject>AMINO ACIDS</subject><subject>AMINOACIDOS</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Base Sequence</subject><subject>Binding Sites - genetics</subject><subject>DNA, Bacterial - genetics</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Heme - chemistry</subject><subject>Hemeproteins - chemistry</subject><subject>Hemeproteins - genetics</subject><subject>Hemeproteins - metabolism</subject><subject>IDENTIFICACION</subject><subject>IDENTIFICATION</subject><subject>Kinetics</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>Oxidation-Reduction</subject><subject>Oxygen - metabolism</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>RHIZOBIUM MELILOTI</subject><subject>Signal Transduction</subject><subject>Sinorhizobium meliloti - genetics</subject><subject>Sinorhizobium meliloti - metabolism</subject><issn>0006-291X</issn><issn>1090-2104</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNp1kMFr2zAUh8XY6LJ2190GOu3mVE-WZfsYyroUAi3tCr0JWXpqNGwrlZzSjP3xU5awnnqS4H2_n_Q-Qr4AmwNj8rzroplD2zbzRrbiHZkBa1nBgYn3ZMYyUfAWHj6STyn9YgxAyPaEnLRScBBiRv5cWRwn77zRkw8jDY5Oa6TLnY1hsw6dN3Qx-DHQhfGW3mLydospX562PqKlLkS6xAHpIiUcun5H_fiv4Xbtf-e47un1y-4RR3qHY8rwTQwTZubSv6zOyAen-4Sfj-cpub_8_vNiWayuf1xdLFaFEVUzFTWCzbtqVwHXyHXZcGgr5jphy0aC5uC47JzgrtSidgBGY2WM5dLIWsu6PCXfDr2bGJ7y9yc1-GSw7_WIYZsUyEqymkEG5wfQxJBSRKc20Q867hQwtdet9rrVXrfa686Br8fmbTeg_Y8f_b7OnQ5KP0af1P1djteshhKaPG8Oc8zrP3uMKhmPo0Gb7ZpJ2eDfevovYYGYpQ</recordid><startdate>19980618</startdate><enddate>19980618</enddate><creator>Nakamura, Hiro</creator><creator>Saito, Ken</creator><creator>Ito, Eiichi</creator><creator>Tamura, Koji</creator><creator>Tsuchiya, Terumasa</creator><creator>Nishigaki, Koichi</creator><creator>Shiro, Yoshitsugu</creator><creator>Iizuka, Tetsutaro</creator><general>Elsevier Inc</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>19980618</creationdate><title>Identification of the Hydrophobic Amino Acid Residues Required for Heme Assembly in the Rhizobial Oxygen Sensor Protein FixL</title><author>Nakamura, Hiro ; Saito, Ken ; Ito, Eiichi ; Tamura, Koji ; Tsuchiya, Terumasa ; Nishigaki, Koichi ; Shiro, Yoshitsugu ; Iizuka, Tetsutaro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c458t-7e1d100af512ae2a3821950fb4d3861a21f26bf42f3a47f11cae5ccd26c67a673</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>ACIDE AMINE</topic><topic>Amino Acid Sequence</topic><topic>AMINO ACIDS</topic><topic>AMINOACIDOS</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Base Sequence</topic><topic>Binding Sites - genetics</topic><topic>DNA, Bacterial - genetics</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Heme - chemistry</topic><topic>Hemeproteins - chemistry</topic><topic>Hemeproteins - genetics</topic><topic>Hemeproteins - metabolism</topic><topic>IDENTIFICACION</topic><topic>IDENTIFICATION</topic><topic>Kinetics</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>Oxidation-Reduction</topic><topic>Oxygen - metabolism</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>RHIZOBIUM MELILOTI</topic><topic>Signal Transduction</topic><topic>Sinorhizobium meliloti - genetics</topic><topic>Sinorhizobium meliloti - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nakamura, Hiro</creatorcontrib><creatorcontrib>Saito, Ken</creatorcontrib><creatorcontrib>Ito, Eiichi</creatorcontrib><creatorcontrib>Tamura, Koji</creatorcontrib><creatorcontrib>Tsuchiya, Terumasa</creatorcontrib><creatorcontrib>Nishigaki, Koichi</creatorcontrib><creatorcontrib>Shiro, Yoshitsugu</creatorcontrib><creatorcontrib>Iizuka, Tetsutaro</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Biochemical and biophysical research communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nakamura, Hiro</au><au>Saito, Ken</au><au>Ito, Eiichi</au><au>Tamura, Koji</au><au>Tsuchiya, Terumasa</au><au>Nishigaki, Koichi</au><au>Shiro, Yoshitsugu</au><au>Iizuka, Tetsutaro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of the Hydrophobic Amino Acid Residues Required for Heme Assembly in the Rhizobial Oxygen Sensor Protein FixL</atitle><jtitle>Biochemical and biophysical research communications</jtitle><addtitle>Biochem Biophys Res Commun</addtitle><date>1998-06-18</date><risdate>1998</risdate><volume>247</volume><issue>2</issue><spage>427</spage><epage>431</epage><pages>427-431</pages><issn>0006-291X</issn><eissn>1090-2104</eissn><abstract>Rhizobial FixL is a novel heme protein, which senses environmental oxygen tension and directs signal transduction via protein phosphotransfer. To identify the essential residues for heme assembly inRhizobium melilotiFixL, we individually replaced the 18 invariant hydrophobic amino acid residues (F, I, L, and V) in the heme-containing domain with alanine and histidine. Spectroscopic measurements of the soluble fractions fromfixLrecombinantEscherichia colirevealed that V152, F162, F170, I172, L185, F226, L230, and F243 as well as the proximal ligand H194 were indispensable for heme assembly. Autoxidation rates of purified I209H, I210A, and I210H were 65-fold, 15-fold, and 15-fold, respectively, faster than that of the wild type, although they retained heme in the protein. The absorption peak in the Soret region of the ferric I209H or I210H was red-shifted, suggesting that the ferric heme is a hexa-coordinate form in these mutants.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>9642144</pmid><doi>10.1006/bbrc.1998.8694</doi><tpages>5</tpages></addata></record> |
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subjects | ACIDE AMINE Amino Acid Sequence AMINO ACIDS AMINOACIDOS Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism Base Sequence Binding Sites - genetics DNA, Bacterial - genetics Escherichia coli Escherichia coli - genetics Heme - chemistry Hemeproteins - chemistry Hemeproteins - genetics Hemeproteins - metabolism IDENTIFICACION IDENTIFICATION Kinetics Molecular Sequence Data Mutagenesis, Site-Directed Oxidation-Reduction Oxygen - metabolism Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism RHIZOBIUM MELILOTI Signal Transduction Sinorhizobium meliloti - genetics Sinorhizobium meliloti - metabolism |
title | Identification of the Hydrophobic Amino Acid Residues Required for Heme Assembly in the Rhizobial Oxygen Sensor Protein FixL |
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