Point Mutations at Glycine-121 of Escherichia coli Dihydrofolate Reductase: Important Roles of a Flexible Loop in the Stability and Function

To elucidate the role of a flexible loop in the stability and function of Escherichia coli dihydrofolate reductase, glycine-121 in a flexible loop (residues 117–131), separated by 19 A from active site Asp27, was substituted by site-directed mutagenesis with eight amino acids (Ala, Val, Leu, Asp, Se...

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Bibliographic Details
Published in:Journal of biochemistry (Tokyo) 1994, Vol.116 (1), p.34-41
Main Authors: Gekko, Kunihiko, Kunori, Yuichi, Takeuchi, Hideatsu, Ichihara, Shigeyuki, Kodama, Michiko
Format: Article
Language:English
Subjects:
Base Sequence
Circular Dichroism
dihydrofolate reductase
Enzyme Stability
Escherichia coli
Escherichia coli - enzymology
Escherichia coli - genetics
Glycine - genetics
Helix-Loop-Helix Motifs
Molecular Sequence Data
Point Mutation
role of flexible loop
stability and function
Structure-Activity Relationship
Tetrahydrofolate Dehydrogenase - genetics
Tetrahydrofolate Dehydrogenase - physiology
Thermodynamics
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Summary:To elucidate the role of a flexible loop in the stability and function of Escherichia coli dihydrofolate reductase, glycine-121 in a flexible loop (residues 117–131), separated by 19 A from active site Asp27, was substituted by site-directed mutagenesis with eight amino acids (Ala, Val, Leu, Asp, Ser, Cys, Tyr, and His). The free energy change of unfolding decreased in the order of G121A>G121D>G121C>G121S, wild-type > G121H > G121Y > G121L > G121V. The thermal denaturation temperature decreased with all mutations, accompanied by a decrease in the calorimetric enthalpy of denaturation. The steady-state kinetic parameter for the enzyme reaction, Km, was only slightly influenced, but fton was significantly decreased by the mutations, there being 3- (G121C) to 42-fold (G121L) decreases in kan/Km compared to that of the wild-type enzyme. The effects of mutations on the stability and enzyme activity were statistically examined as a function of the hydro phobicity and volume of amino acids introduced. The diminished stability and activity with increases in the hydrophobicity and volume of amino acids suggest that the main effect of the mutations would be modification of the flexibility of the loop due to overcrowding of the bulky side chains, overcoming the enhancement of the hydrophobic interaction.
ISSN:0021-924X
DOI:10.1093/oxfordjournals.jbchem.a124499