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Gene expression profiling of giant cell tumor of bone reveals downregulation of extracellular matrix components decorin and lumican associated with lung metastasis
Giant cell tumor of bone (GCTB) displays worrisome clinical features such as local recurrence and occasionally metastatic disease which are unpredictable by morphology. Additional routinely usable biomarkers do not exist. Gene expression profiles of six clinically defined groups of GCTB and one grou...
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Published in: | Virchows Archiv : an international journal of pathology 2014-12, Vol.465 (6), p.703-713 |
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creator | Lieveld, M. Bodson, E. De Boeck, G. Nouman, B. Cleton-Jansen, A. M. Korsching, E. Benassi, M. S. Picci, P. Sys, G. Poffyn, B. Athanasou, N. A. Hogendoorn, P. C. W. Forsyth, R. G. |
description | Giant cell tumor of bone (GCTB) displays worrisome clinical features such as local recurrence and occasionally metastatic disease which are unpredictable by morphology. Additional routinely usable biomarkers do not exist. Gene expression profiles of six clinically defined groups of GCTB and one group of aneurysmal bone cyst (ABC) were determined by microarray (
n
= 33). The most promising differentially expressed genes were validated by Q-PCR as potential biomarkers in a larger patient group (
n
= 41). Corresponding protein expression was confirmed by immunohistochemistry. Unsupervised hierarchical clustering reveals a metastatic GCTB cluster, a heterogeneous, non-metastatic GCTB cluster, and a primary ABC cluster. Balanced score testing indicates that lumican (LUM) and decorin (DCN) are the most promising biomarkers as they have lower level of expression in the metastatic group. Expression of dermatopontin (DPT) was significantly lower in recurrent tumors. Validation of the results was performed by paired and unpaired
t
test in primary GCTB and corresponding metastases, which proved that the differential expression of LUM and DCN is tumor specific rather than location specific. Our findings show that several genes related to extracellular matrix integrity (LUM, DCN, and DPT) are differentially expressed and may serve as biomarkers for metastatic and recurrent GCTB. |
doi_str_mv | 10.1007/s00428-014-1666-7 |
format | article |
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n
= 33). The most promising differentially expressed genes were validated by Q-PCR as potential biomarkers in a larger patient group (
n
= 41). Corresponding protein expression was confirmed by immunohistochemistry. Unsupervised hierarchical clustering reveals a metastatic GCTB cluster, a heterogeneous, non-metastatic GCTB cluster, and a primary ABC cluster. Balanced score testing indicates that lumican (LUM) and decorin (DCN) are the most promising biomarkers as they have lower level of expression in the metastatic group. Expression of dermatopontin (DPT) was significantly lower in recurrent tumors. Validation of the results was performed by paired and unpaired
t
test in primary GCTB and corresponding metastases, which proved that the differential expression of LUM and DCN is tumor specific rather than location specific. Our findings show that several genes related to extracellular matrix integrity (LUM, DCN, and DPT) are differentially expressed and may serve as biomarkers for metastatic and recurrent GCTB.</description><identifier>ISSN: 0945-6317</identifier><identifier>EISSN: 1432-2307</identifier><identifier>DOI: 10.1007/s00428-014-1666-7</identifier><identifier>PMID: 25304290</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Adolescent ; Adult ; Biomarkers, Tumor - analysis ; Bone Neoplasms - genetics ; Bone Neoplasms - metabolism ; Bone Neoplasms - pathology ; Child ; Chondroitin Sulfate Proteoglycans - biosynthesis ; Chondroitin Sulfate Proteoglycans - genetics ; Cluster Analysis ; Decorin - biosynthesis ; Decorin - genetics ; Down-Regulation ; Extracellular Matrix - genetics ; Extracellular Matrix - metabolism ; Extracellular Matrix - pathology ; Extracellular Matrix Proteins - biosynthesis ; Extracellular Matrix Proteins - genetics ; Female ; Gene Expression Profiling ; Giant Cell Tumor of Bone - genetics ; Giant Cell Tumor of Bone - metabolism ; Giant Cell Tumor of Bone - pathology ; Humans ; Immunohistochemistry ; Keratan Sulfate - biosynthesis ; Keratan Sulfate - genetics ; Lumican ; Lung Neoplasms - secondary ; Male ; Medicine ; Medicine & Public Health ; Middle Aged ; Neoplasm Invasiveness - genetics ; Neoplasm Invasiveness - pathology ; Neoplasm Recurrence, Local - genetics ; Neoplasm Recurrence, Local - metabolism ; Neoplasm Recurrence, Local - pathology ; Oligonucleotide Array Sequence Analysis ; Original Article ; Pathology ; Real-Time Polymerase Chain Reaction ; Transcriptome ; Tumors ; Young Adult</subject><ispartof>Virchows Archiv : an international journal of pathology, 2014-12, Vol.465 (6), p.703-713</ispartof><rights>Springer-Verlag Berlin Heidelberg 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c405t-55b43cb1c34474872e65af442437f766bf231ca8a57993f5ae483af8beb66b963</citedby><cites>FETCH-LOGICAL-c405t-55b43cb1c34474872e65af442437f766bf231ca8a57993f5ae483af8beb66b963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25304290$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lieveld, M.</creatorcontrib><creatorcontrib>Bodson, E.</creatorcontrib><creatorcontrib>De Boeck, G.</creatorcontrib><creatorcontrib>Nouman, B.</creatorcontrib><creatorcontrib>Cleton-Jansen, A. M.</creatorcontrib><creatorcontrib>Korsching, E.</creatorcontrib><creatorcontrib>Benassi, M. S.</creatorcontrib><creatorcontrib>Picci, P.</creatorcontrib><creatorcontrib>Sys, G.</creatorcontrib><creatorcontrib>Poffyn, B.</creatorcontrib><creatorcontrib>Athanasou, N. A.</creatorcontrib><creatorcontrib>Hogendoorn, P. C. W.</creatorcontrib><creatorcontrib>Forsyth, R. G.</creatorcontrib><title>Gene expression profiling of giant cell tumor of bone reveals downregulation of extracellular matrix components decorin and lumican associated with lung metastasis</title><title>Virchows Archiv : an international journal of pathology</title><addtitle>Virchows Arch</addtitle><addtitle>Virchows Arch</addtitle><description>Giant cell tumor of bone (GCTB) displays worrisome clinical features such as local recurrence and occasionally metastatic disease which are unpredictable by morphology. Additional routinely usable biomarkers do not exist. Gene expression profiles of six clinically defined groups of GCTB and one group of aneurysmal bone cyst (ABC) were determined by microarray (
n
= 33). The most promising differentially expressed genes were validated by Q-PCR as potential biomarkers in a larger patient group (
n
= 41). Corresponding protein expression was confirmed by immunohistochemistry. Unsupervised hierarchical clustering reveals a metastatic GCTB cluster, a heterogeneous, non-metastatic GCTB cluster, and a primary ABC cluster. Balanced score testing indicates that lumican (LUM) and decorin (DCN) are the most promising biomarkers as they have lower level of expression in the metastatic group. Expression of dermatopontin (DPT) was significantly lower in recurrent tumors. Validation of the results was performed by paired and unpaired
t
test in primary GCTB and corresponding metastases, which proved that the differential expression of LUM and DCN is tumor specific rather than location specific. Our findings show that several genes related to extracellular matrix integrity (LUM, DCN, and DPT) are differentially expressed and may serve as biomarkers for metastatic and recurrent GCTB.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Biomarkers, Tumor - analysis</subject><subject>Bone Neoplasms - genetics</subject><subject>Bone Neoplasms - metabolism</subject><subject>Bone Neoplasms - pathology</subject><subject>Child</subject><subject>Chondroitin Sulfate Proteoglycans - biosynthesis</subject><subject>Chondroitin Sulfate Proteoglycans - genetics</subject><subject>Cluster Analysis</subject><subject>Decorin - biosynthesis</subject><subject>Decorin - genetics</subject><subject>Down-Regulation</subject><subject>Extracellular Matrix - genetics</subject><subject>Extracellular Matrix - metabolism</subject><subject>Extracellular Matrix - pathology</subject><subject>Extracellular Matrix Proteins - biosynthesis</subject><subject>Extracellular Matrix Proteins - genetics</subject><subject>Female</subject><subject>Gene Expression Profiling</subject><subject>Giant Cell Tumor of Bone - genetics</subject><subject>Giant Cell Tumor of Bone - metabolism</subject><subject>Giant Cell Tumor of Bone - pathology</subject><subject>Humans</subject><subject>Immunohistochemistry</subject><subject>Keratan Sulfate - biosynthesis</subject><subject>Keratan Sulfate - genetics</subject><subject>Lumican</subject><subject>Lung Neoplasms - secondary</subject><subject>Male</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Middle Aged</subject><subject>Neoplasm Invasiveness - genetics</subject><subject>Neoplasm Invasiveness - pathology</subject><subject>Neoplasm Recurrence, Local - genetics</subject><subject>Neoplasm Recurrence, Local - metabolism</subject><subject>Neoplasm Recurrence, Local - pathology</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Original Article</subject><subject>Pathology</subject><subject>Real-Time Polymerase Chain Reaction</subject><subject>Transcriptome</subject><subject>Tumors</subject><subject>Young Adult</subject><issn>0945-6317</issn><issn>1432-2307</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqNkd9qFTEQxoMo9tj2AbyRgDferM2_TXYvpWgtFLyp1yGbM3tM2U2OSdaePo8v6qynigiCEEiY-X7fMPkIecnZW86YuSiMKdE1jKuGa60b84RsuJKiEZKZp2TDetU2WnJzQl6UcseY4B3Xz8mJaCWSPduQ71cQgcJhn6GUkCLd5zSGKcQdTSPdBRcr9TBNtC5zymttSAhk-AZuKnSb7mOG3TK5usLYhkPNbiWwlunsag4H6tO8RyxWJMCnHCJ1cUunZQ7e4buU5IOrsKX3oX7BOo6fobqCJ5Qz8mzEYXD-eJ-Szx_e315-bG4-XV1fvrtpvGJtbdp2UNIP3EuljOqMAN26USmhpBmN1sMoJPeuc63pezm2DlQn3dgNMGCz1_KUvDn64h98XaBUO4eyruIipKVYrnvVG9Ur9h9S0XWmZ6xF6eu_pHdpyREX-aniRiu2GvKjyudUSobR7nOYXX6wnNk1bHsM22LYdg3bGmRePTovwwzb38SvdFEgjoKCrbiD_Mfof7r-AHYFt5s</recordid><startdate>20141201</startdate><enddate>20141201</enddate><creator>Lieveld, M.</creator><creator>Bodson, E.</creator><creator>De Boeck, G.</creator><creator>Nouman, B.</creator><creator>Cleton-Jansen, A. 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M. ; Korsching, E. ; Benassi, M. S. ; Picci, P. ; Sys, G. ; Poffyn, B. ; Athanasou, N. A. ; Hogendoorn, P. C. W. ; Forsyth, R. 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M.</au><au>Korsching, E.</au><au>Benassi, M. S.</au><au>Picci, P.</au><au>Sys, G.</au><au>Poffyn, B.</au><au>Athanasou, N. A.</au><au>Hogendoorn, P. C. W.</au><au>Forsyth, R. G.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Gene expression profiling of giant cell tumor of bone reveals downregulation of extracellular matrix components decorin and lumican associated with lung metastasis</atitle><jtitle>Virchows Archiv : an international journal of pathology</jtitle><stitle>Virchows Arch</stitle><addtitle>Virchows Arch</addtitle><date>2014-12-01</date><risdate>2014</risdate><volume>465</volume><issue>6</issue><spage>703</spage><epage>713</epage><pages>703-713</pages><issn>0945-6317</issn><eissn>1432-2307</eissn><abstract>Giant cell tumor of bone (GCTB) displays worrisome clinical features such as local recurrence and occasionally metastatic disease which are unpredictable by morphology. Additional routinely usable biomarkers do not exist. Gene expression profiles of six clinically defined groups of GCTB and one group of aneurysmal bone cyst (ABC) were determined by microarray (
n
= 33). The most promising differentially expressed genes were validated by Q-PCR as potential biomarkers in a larger patient group (
n
= 41). Corresponding protein expression was confirmed by immunohistochemistry. Unsupervised hierarchical clustering reveals a metastatic GCTB cluster, a heterogeneous, non-metastatic GCTB cluster, and a primary ABC cluster. Balanced score testing indicates that lumican (LUM) and decorin (DCN) are the most promising biomarkers as they have lower level of expression in the metastatic group. Expression of dermatopontin (DPT) was significantly lower in recurrent tumors. Validation of the results was performed by paired and unpaired
t
test in primary GCTB and corresponding metastases, which proved that the differential expression of LUM and DCN is tumor specific rather than location specific. Our findings show that several genes related to extracellular matrix integrity (LUM, DCN, and DPT) are differentially expressed and may serve as biomarkers for metastatic and recurrent GCTB.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>25304290</pmid><doi>10.1007/s00428-014-1666-7</doi><tpages>11</tpages></addata></record> |
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subjects | Adolescent Adult Biomarkers, Tumor - analysis Bone Neoplasms - genetics Bone Neoplasms - metabolism Bone Neoplasms - pathology Child Chondroitin Sulfate Proteoglycans - biosynthesis Chondroitin Sulfate Proteoglycans - genetics Cluster Analysis Decorin - biosynthesis Decorin - genetics Down-Regulation Extracellular Matrix - genetics Extracellular Matrix - metabolism Extracellular Matrix - pathology Extracellular Matrix Proteins - biosynthesis Extracellular Matrix Proteins - genetics Female Gene Expression Profiling Giant Cell Tumor of Bone - genetics Giant Cell Tumor of Bone - metabolism Giant Cell Tumor of Bone - pathology Humans Immunohistochemistry Keratan Sulfate - biosynthesis Keratan Sulfate - genetics Lumican Lung Neoplasms - secondary Male Medicine Medicine & Public Health Middle Aged Neoplasm Invasiveness - genetics Neoplasm Invasiveness - pathology Neoplasm Recurrence, Local - genetics Neoplasm Recurrence, Local - metabolism Neoplasm Recurrence, Local - pathology Oligonucleotide Array Sequence Analysis Original Article Pathology Real-Time Polymerase Chain Reaction Transcriptome Tumors Young Adult |
title | Gene expression profiling of giant cell tumor of bone reveals downregulation of extracellular matrix components decorin and lumican associated with lung metastasis |
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