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Assessing the evolutionary history of the class Synurophyceae (Heterokonta) using molecular, morphometric, and paleobiological approaches
• Premise of the study: Heterokont algae of the class Synurophyceae, characterized by distinctive siliceous scales that cover the surface of the cell, are ecologically important in inland waters, yet their evolutionary history remains enigmatic. We explore phylogenetic relationships within this grou...
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Published in: | American journal of botany 2015-06, Vol.102 (6), p.921-941 |
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description | • Premise of the study: Heterokont algae of the class Synurophyceae, characterized by distinctive siliceous scales that cover the surface of the cell, are ecologically important in inland waters, yet their evolutionary history remains enigmatic. We explore phylogenetic relationships within this group of algae relative to geologic time, with a focus on evolution of siliceous components. • Methods: We combined an expansive five-gene and time-calibrated molecular phylogeny of synurophyte algae with an extensive array of fossil specimens from the middle Eocene to infer evolutionary trends within the group. • Key results: The group originated in the Jurassic approximately 157 million years ago (Ma), with the keystone genera Mallomonas and Synura diverging during the Early Cretaceous at 130 Ma. Mallomonas further splits into two major subclades, signaling the evolution of the V-rib believed to aid in the spacing and organization of scales on the cell covering. Synura also diverges into two primary subclades, separating taxa with forward-projecting spines on the scale from those with a keel positioned on the scale proper. Approximately one third of the fossil species are extinct, whereas the remaining taxa are linked to modern congeners. • Conclusions: The taxonomy of synurophytes, which relies extensively on the morphology of the siliceous components, is largely congruent with molecular analyses. Scales of extinct synurophytes were significantly larger than those of modern taxa and may have played a role in their demise. In contrast, many fossil species linked to modern lineages were smaller in the middle Eocene, possibly reflecting growth in the greenhouse climatic state that characterized this geologic interval. |
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We explore phylogenetic relationships within this group of algae relative to geologic time, with a focus on evolution of siliceous components. • Methods: We combined an expansive five-gene and time-calibrated molecular phylogeny of synurophyte algae with an extensive array of fossil specimens from the middle Eocene to infer evolutionary trends within the group. • Key results: The group originated in the Jurassic approximately 157 million years ago (Ma), with the keystone genera Mallomonas and Synura diverging during the Early Cretaceous at 130 Ma. Mallomonas further splits into two major subclades, signaling the evolution of the V-rib believed to aid in the spacing and organization of scales on the cell covering. Synura also diverges into two primary subclades, separating taxa with forward-projecting spines on the scale from those with a keel positioned on the scale proper. Approximately one third of the fossil species are extinct, whereas the remaining taxa are linked to modern congeners. • Conclusions: The taxonomy of synurophytes, which relies extensively on the morphology of the siliceous components, is largely congruent with molecular analyses. Scales of extinct synurophytes were significantly larger than those of modern taxa and may have played a role in their demise. In contrast, many fossil species linked to modern lineages were smaller in the middle Eocene, possibly reflecting growth in the greenhouse climatic state that characterized this geologic interval.</description><identifier>ISSN: 0002-9122</identifier><identifier>EISSN: 1537-2197</identifier><identifier>DOI: 10.3732/ajb.1500004</identifier><identifier>PMID: 26101418</identifier><identifier>CODEN: AJBOAA</identifier><language>eng</language><publisher>United States: Botanical Society of America, Inc</publisher><subject>Algae ; Base Sequence ; Biological Evolution ; bristles ; Calibration ; Cell Size ; Evolutionary biology ; evolutionary history ; fossil synurophytes ; Fossils ; Heterokonta ; Magnoliopsida - anatomy & histology ; Magnoliopsida - cytology ; Magnoliopsida - ultrastructure ; Mallomonas ; Morphology ; Paleobotany ; Paleontology ; Phylogenetics ; Phylogeny ; scales ; Synura ; Synurales ; Synurophyceae ; Time Factors</subject><ispartof>American journal of botany, 2015-06, Vol.102 (6), p.921-941</ispartof><rights>Copyright 2015 Botanical Society of America, Inc.</rights><rights>2015 Botanical Society of America</rights><rights>2015 Botanical Society of America, Inc.</rights><rights>Copyright Botanical Society of America, Inc. Jun 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a4741-9a973056018f8d6f8b64a07ad1542c026e56f21143048a18f521cb982eb05413</citedby><cites>FETCH-LOGICAL-a4741-9a973056018f8d6f8b64a07ad1542c026e56f21143048a18f521cb982eb05413</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/43826766$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/43826766$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,58236,58469</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26101418$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Siver, Peter A.</creatorcontrib><creatorcontrib>Jo, Bok Yeon</creatorcontrib><creatorcontrib>Kim, Jong Im</creatorcontrib><creatorcontrib>Shin, Woongghi</creatorcontrib><creatorcontrib>Lott, Anne Marie</creatorcontrib><creatorcontrib>Wolfe, Alexander P.</creatorcontrib><title>Assessing the evolutionary history of the class Synurophyceae (Heterokonta) using molecular, morphometric, and paleobiological approaches</title><title>American journal of botany</title><addtitle>Am J Bot</addtitle><description>• Premise of the study: Heterokont algae of the class Synurophyceae, characterized by distinctive siliceous scales that cover the surface of the cell, are ecologically important in inland waters, yet their evolutionary history remains enigmatic. We explore phylogenetic relationships within this group of algae relative to geologic time, with a focus on evolution of siliceous components. • Methods: We combined an expansive five-gene and time-calibrated molecular phylogeny of synurophyte algae with an extensive array of fossil specimens from the middle Eocene to infer evolutionary trends within the group. • Key results: The group originated in the Jurassic approximately 157 million years ago (Ma), with the keystone genera Mallomonas and Synura diverging during the Early Cretaceous at 130 Ma. Mallomonas further splits into two major subclades, signaling the evolution of the V-rib believed to aid in the spacing and organization of scales on the cell covering. Synura also diverges into two primary subclades, separating taxa with forward-projecting spines on the scale from those with a keel positioned on the scale proper. Approximately one third of the fossil species are extinct, whereas the remaining taxa are linked to modern congeners. • Conclusions: The taxonomy of synurophytes, which relies extensively on the morphology of the siliceous components, is largely congruent with molecular analyses. Scales of extinct synurophytes were significantly larger than those of modern taxa and may have played a role in their demise. In contrast, many fossil species linked to modern lineages were smaller in the middle Eocene, possibly reflecting growth in the greenhouse climatic state that characterized this geologic interval.</description><subject>Algae</subject><subject>Base Sequence</subject><subject>Biological Evolution</subject><subject>bristles</subject><subject>Calibration</subject><subject>Cell Size</subject><subject>Evolutionary biology</subject><subject>evolutionary history</subject><subject>fossil synurophytes</subject><subject>Fossils</subject><subject>Heterokonta</subject><subject>Magnoliopsida - anatomy & histology</subject><subject>Magnoliopsida - cytology</subject><subject>Magnoliopsida - ultrastructure</subject><subject>Mallomonas</subject><subject>Morphology</subject><subject>Paleobotany</subject><subject>Paleontology</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>scales</subject><subject>Synura</subject><subject>Synurales</subject><subject>Synurophyceae</subject><subject>Time Factors</subject><issn>0002-9122</issn><issn>1537-2197</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqFkU1v1DAQhi1ERZfCiTMoEpdWNMV2bCc-LlWhRZU40Hs08U4aL04c7AS0P4F_jfeDHnqgvozHfuYdzbyEvGH0oigL_hHWzQWTNB3xjCyYLMqcM10-J4v0xHPNOD8mL2Ncp1QLzV-QY64YZYJVC_JnGSPGaIf7bOoww1_ezZP1A4RN1tk4-RR9u_szDmLMvm-GOfix2xgEzE6vccLgf_hhgrNs3un03qGZHYTzdA1j53ucgjXnGQyrbASHvrHe-XtrwGUwjsGD6TC-IkctuIivD_GE3H2-uru8zm-_fbm5XN7mIErBcg26LKhUlFVttVJt1SgBtIQVk4IbyhVK1XLGREFFBQmSnJlGVxwbKgUrTsjpXjb1_TljnOreRoPOwYB-jjUrqaQqtaJPo0qnNUqleULfP0LXfg5DmmNHVckouhX8sKdM8DEGbOsx2D6tuma03npZJy_rg5eJfnfQnJseVw_sP_MSwPbAb-tw8z-tevn1E6eab8d_u69Zb719qBFFxVWpVPEXw5OyeQ</recordid><startdate>201506</startdate><enddate>201506</enddate><creator>Siver, Peter A.</creator><creator>Jo, Bok Yeon</creator><creator>Kim, Jong Im</creator><creator>Shin, Woongghi</creator><creator>Lott, Anne Marie</creator><creator>Wolfe, Alexander P.</creator><general>Botanical Society of America, Inc</general><general>Botanical Society of America</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>201506</creationdate><title>Assessing the evolutionary history of the class Synurophyceae (Heterokonta) using molecular, morphometric, and paleobiological approaches</title><author>Siver, Peter A. ; Jo, Bok Yeon ; Kim, Jong Im ; Shin, Woongghi ; Lott, Anne Marie ; Wolfe, Alexander P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a4741-9a973056018f8d6f8b64a07ad1542c026e56f21143048a18f521cb982eb05413</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Algae</topic><topic>Base Sequence</topic><topic>Biological Evolution</topic><topic>bristles</topic><topic>Calibration</topic><topic>Cell Size</topic><topic>Evolutionary biology</topic><topic>evolutionary history</topic><topic>fossil synurophytes</topic><topic>Fossils</topic><topic>Heterokonta</topic><topic>Magnoliopsida - anatomy & histology</topic><topic>Magnoliopsida - cytology</topic><topic>Magnoliopsida - ultrastructure</topic><topic>Mallomonas</topic><topic>Morphology</topic><topic>Paleobotany</topic><topic>Paleontology</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>scales</topic><topic>Synura</topic><topic>Synurales</topic><topic>Synurophyceae</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Siver, Peter A.</creatorcontrib><creatorcontrib>Jo, Bok Yeon</creatorcontrib><creatorcontrib>Kim, Jong Im</creatorcontrib><creatorcontrib>Shin, Woongghi</creatorcontrib><creatorcontrib>Lott, Anne Marie</creatorcontrib><creatorcontrib>Wolfe, Alexander P.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>American journal of botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Siver, Peter A.</au><au>Jo, Bok Yeon</au><au>Kim, Jong Im</au><au>Shin, Woongghi</au><au>Lott, Anne Marie</au><au>Wolfe, Alexander P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessing the evolutionary history of the class Synurophyceae (Heterokonta) using molecular, morphometric, and paleobiological approaches</atitle><jtitle>American journal of botany</jtitle><addtitle>Am J Bot</addtitle><date>2015-06</date><risdate>2015</risdate><volume>102</volume><issue>6</issue><spage>921</spage><epage>941</epage><pages>921-941</pages><issn>0002-9122</issn><eissn>1537-2197</eissn><coden>AJBOAA</coden><abstract>• Premise of the study: Heterokont algae of the class Synurophyceae, characterized by distinctive siliceous scales that cover the surface of the cell, are ecologically important in inland waters, yet their evolutionary history remains enigmatic. We explore phylogenetic relationships within this group of algae relative to geologic time, with a focus on evolution of siliceous components. • Methods: We combined an expansive five-gene and time-calibrated molecular phylogeny of synurophyte algae with an extensive array of fossil specimens from the middle Eocene to infer evolutionary trends within the group. • Key results: The group originated in the Jurassic approximately 157 million years ago (Ma), with the keystone genera Mallomonas and Synura diverging during the Early Cretaceous at 130 Ma. Mallomonas further splits into two major subclades, signaling the evolution of the V-rib believed to aid in the spacing and organization of scales on the cell covering. Synura also diverges into two primary subclades, separating taxa with forward-projecting spines on the scale from those with a keel positioned on the scale proper. Approximately one third of the fossil species are extinct, whereas the remaining taxa are linked to modern congeners. • Conclusions: The taxonomy of synurophytes, which relies extensively on the morphology of the siliceous components, is largely congruent with molecular analyses. Scales of extinct synurophytes were significantly larger than those of modern taxa and may have played a role in their demise. In contrast, many fossil species linked to modern lineages were smaller in the middle Eocene, possibly reflecting growth in the greenhouse climatic state that characterized this geologic interval.</abstract><cop>United States</cop><pub>Botanical Society of America, Inc</pub><pmid>26101418</pmid><doi>10.3732/ajb.1500004</doi><tpages>21</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Algae Base Sequence Biological Evolution bristles Calibration Cell Size Evolutionary biology evolutionary history fossil synurophytes Fossils Heterokonta Magnoliopsida - anatomy & histology Magnoliopsida - cytology Magnoliopsida - ultrastructure Mallomonas Morphology Paleobotany Paleontology Phylogenetics Phylogeny scales Synura Synurales Synurophyceae Time Factors |
title | Assessing the evolutionary history of the class Synurophyceae (Heterokonta) using molecular, morphometric, and paleobiological approaches |
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