Sequence length and variation in the mitochondrial control region of two freshwater gobiid fishes belonging to Rhinogobius (Teleostei: Gobioidei)

The control region (D‐loop) of mitochondrial DNA (mtDNA) was amplified and sequenced for eight samples of the rhinogobies Rhinogobius maculafasciatus and R. giurinus from Taiwan and southern China. The control regions of both species are of 841–842 bp; the length of these sequences being the most co...

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Published in:Journal of fish biology 1998-07, Vol.53 (1), p.179-191
Main Authors: Chen, I-S., Hsu, C.-H., Hui, C.-F., Shao, K.-T., Miller, P. J., Fang, L.-S.
Format: Article
Language:English
Subjects:
Animals
Biological and medical sciences
D-loop
Fundamental and applied biological sciences. Psychology
Genetics of eukaryotes. Biological and molecular evolution
Gobiidae
mitochondrial genome
mtDNA sequence
polymerase chain reaction
Population genetics, reproduction patterns
Rhinogobius
Rhinogobius giurinus
Rhinogobius maculafasciatus
tRNA
Vertebrata
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cited_by cdi_FETCH-LOGICAL-c5099-9346e12e0b195a7c743837b180a0558c11bcb2d13fd1ad3d5a432cf1e55565c43
cites cdi_FETCH-LOGICAL-c5099-9346e12e0b195a7c743837b180a0558c11bcb2d13fd1ad3d5a432cf1e55565c43
container_end_page 191
container_issue 1
container_start_page 179
container_title Journal of fish biology
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creator Chen, I-S.
Hsu, C.-H.
Hui, C.-F.
Shao, K.-T.
Miller, P. J.
Fang, L.-S.
description The control region (D‐loop) of mitochondrial DNA (mtDNA) was amplified and sequenced for eight samples of the rhinogobies Rhinogobius maculafasciatus and R. giurinus from Taiwan and southern China. The control regions of both species are of 841–842 bp; the length of these sequences being the most compact among all known sequences in teleost fishes. Three conserved sequence blocks (CSB) were observed. The full D‐loop and tRNA Phe gene sequences were determined and compared with other fishes. The interspecific sequence divergence between the two species is 11.3–11.7%; and the intraspecific variation in R. guirinus 0.8–1.8%. Results suggest that the control region of Rhinogobius is informative for phylogenetic reconstruction at both intraspecific and interspecific levels in this gobiid genus.
doi_str_mv 10.1111/j.1095-8649.1998.tb00119.x
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source Wiley-Blackwell Read & Publish Collection
subjects Animals
Biological and medical sciences
D-loop
Fundamental and applied biological sciences. Psychology
Genetics of eukaryotes. Biological and molecular evolution
Gobiidae
mitochondrial genome
mtDNA sequence
polymerase chain reaction
Population genetics, reproduction patterns
Rhinogobius
Rhinogobius giurinus
Rhinogobius maculafasciatus
tRNA
Vertebrata
title Sequence length and variation in the mitochondrial control region of two freshwater gobiid fishes belonging to Rhinogobius (Teleostei: Gobioidei)
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