Loading…
Projected finite elements for reaction–diffusion systems on stationary closed surfaces
In this paper we present a robust, efficient and accurate finite element method for solving reaction–diffusion systems on stationary spheroidal surfaces (these are surfaces which are deformations of the sphere such as ellipsoids, dumbbells, and heart-shaped surfaces) with potential applications in t...
Saved in:
Published in: | Applied numerical mathematics 2015-10, Vol.96, p.45-71 |
---|---|
Main Authors: | , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33 |
---|---|
cites | cdi_FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33 |
container_end_page | 71 |
container_issue | |
container_start_page | 45 |
container_title | Applied numerical mathematics |
container_volume | 96 |
creator | Tuncer, N. Madzvamuse, A. Meir, A.J. |
description | In this paper we present a robust, efficient and accurate finite element method for solving reaction–diffusion systems on stationary spheroidal surfaces (these are surfaces which are deformations of the sphere such as ellipsoids, dumbbells, and heart-shaped surfaces) with potential applications in the areas of developmental biology, cancer research, wound healing, tissue regeneration, and cell motility among many others where such models are routinely used. Our method is inspired by the radially projected finite element method introduced in [39]. (Hence the name “projected” finite element method.) The advantages of the projected finite element method are that it is easy to implement and that it provides a conforming finite element discretization which is “logically” rectangular. To demonstrate the robustness, applicability and generality of this numerical method, we present solutions of reaction–diffusion systems on various spheroidal surfaces. We show that the method presented in this paper preserves positivity of the solutions of reaction–diffusion equations which is not generally true for Galerkin type methods. We conclude that surface geometry plays a pivotal role in pattern formation. For a fixed set of model parameter values, different surfaces give rise to different pattern generation sequences of either spots or stripes or a combination (observed as circular spot-stripe patterns). These results clearly demonstrate the need for detailed theoretical analytical studies to elucidate how surface geometry and curvature influence pattern formation on complex surfaces.
•To our knowledge first article to present the radially projected finite element for reaction–diffusion systems on surfaces.•The method gives a geometrically exact discretization of the surfaces.•We demonstrate that surface geometry and curvature play pivotal roles in pattern formation. |
doi_str_mv | 10.1016/j.apnum.2014.12.012 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1718943414</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0168927415000550</els_id><sourcerecordid>1718943414</sourcerecordid><originalsourceid>FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33</originalsourceid><addsrcrecordid>eNp9kM1KxTAQhYMoeL36BG66dNOaadKfLFzIxT8QdKHgLjTpFFL6c820wt35Dr6hT2Lqde1qDsw5h5mPsXPgCXDIL9uk2g5zn6QcZAJpwiE9YCsoCxFnMueHbBVcZazSQh6zE6KWc55lkq_Y27MfW7QT1lHjBjdhhB32OEwUNaOPPFZ2cuPw_flVu6aZKeiIdjRhT9Eip2pZV34X2W6k0EKzbyqLdMqOmqojPPuba_Z6e_OyuY8fn-4eNtePsRUlTHGpFFY5F6qGMldCKJmD4GBLk6q6BpHZzBgJhTQqTwFMkXNbCFMYY2pEFGLNLva9Wz--z0iT7h1Z7LpqwHEmDQWUSgoJMljF3mr9SOSx0Vvv-nC7Bq4XjrrVvxz1wlFDqgPHkLrapzB88eHQa7IOB4u18wGcrkf3b_4Ho1R_DQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1718943414</pqid></control><display><type>article</type><title>Projected finite elements for reaction–diffusion systems on stationary closed surfaces</title><source>ScienceDirect: Mathematics Backfile</source><source>ScienceDirect Freedom Collection</source><creator>Tuncer, N. ; Madzvamuse, A. ; Meir, A.J.</creator><creatorcontrib>Tuncer, N. ; Madzvamuse, A. ; Meir, A.J.</creatorcontrib><description>In this paper we present a robust, efficient and accurate finite element method for solving reaction–diffusion systems on stationary spheroidal surfaces (these are surfaces which are deformations of the sphere such as ellipsoids, dumbbells, and heart-shaped surfaces) with potential applications in the areas of developmental biology, cancer research, wound healing, tissue regeneration, and cell motility among many others where such models are routinely used. Our method is inspired by the radially projected finite element method introduced in [39]. (Hence the name “projected” finite element method.) The advantages of the projected finite element method are that it is easy to implement and that it provides a conforming finite element discretization which is “logically” rectangular. To demonstrate the robustness, applicability and generality of this numerical method, we present solutions of reaction–diffusion systems on various spheroidal surfaces. We show that the method presented in this paper preserves positivity of the solutions of reaction–diffusion equations which is not generally true for Galerkin type methods. We conclude that surface geometry plays a pivotal role in pattern formation. For a fixed set of model parameter values, different surfaces give rise to different pattern generation sequences of either spots or stripes or a combination (observed as circular spot-stripe patterns). These results clearly demonstrate the need for detailed theoretical analytical studies to elucidate how surface geometry and curvature influence pattern formation on complex surfaces.
•To our knowledge first article to present the radially projected finite element for reaction–diffusion systems on surfaces.•The method gives a geometrically exact discretization of the surfaces.•We demonstrate that surface geometry and curvature play pivotal roles in pattern formation.</description><identifier>ISSN: 0168-9274</identifier><identifier>EISSN: 1873-5460</identifier><identifier>DOI: 10.1016/j.apnum.2014.12.012</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>Discretization ; Finite element method ; Formations ; Mathematical analysis ; Mathematical models ; Pattern formation ; Pattern generation ; Preserves ; Radially projected finite elements ; Reaction–diffusion systems ; Surface geometry ; Surface partial differential equations</subject><ispartof>Applied numerical mathematics, 2015-10, Vol.96, p.45-71</ispartof><rights>2015 The Authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33</citedby><cites>FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33</cites><orcidid>0000-0002-6388-2499</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0168927415000550$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,3564,27924,27925,46003</link.rule.ids></links><search><creatorcontrib>Tuncer, N.</creatorcontrib><creatorcontrib>Madzvamuse, A.</creatorcontrib><creatorcontrib>Meir, A.J.</creatorcontrib><title>Projected finite elements for reaction–diffusion systems on stationary closed surfaces</title><title>Applied numerical mathematics</title><description>In this paper we present a robust, efficient and accurate finite element method for solving reaction–diffusion systems on stationary spheroidal surfaces (these are surfaces which are deformations of the sphere such as ellipsoids, dumbbells, and heart-shaped surfaces) with potential applications in the areas of developmental biology, cancer research, wound healing, tissue regeneration, and cell motility among many others where such models are routinely used. Our method is inspired by the radially projected finite element method introduced in [39]. (Hence the name “projected” finite element method.) The advantages of the projected finite element method are that it is easy to implement and that it provides a conforming finite element discretization which is “logically” rectangular. To demonstrate the robustness, applicability and generality of this numerical method, we present solutions of reaction–diffusion systems on various spheroidal surfaces. We show that the method presented in this paper preserves positivity of the solutions of reaction–diffusion equations which is not generally true for Galerkin type methods. We conclude that surface geometry plays a pivotal role in pattern formation. For a fixed set of model parameter values, different surfaces give rise to different pattern generation sequences of either spots or stripes or a combination (observed as circular spot-stripe patterns). These results clearly demonstrate the need for detailed theoretical analytical studies to elucidate how surface geometry and curvature influence pattern formation on complex surfaces.
•To our knowledge first article to present the radially projected finite element for reaction–diffusion systems on surfaces.•The method gives a geometrically exact discretization of the surfaces.•We demonstrate that surface geometry and curvature play pivotal roles in pattern formation.</description><subject>Discretization</subject><subject>Finite element method</subject><subject>Formations</subject><subject>Mathematical analysis</subject><subject>Mathematical models</subject><subject>Pattern formation</subject><subject>Pattern generation</subject><subject>Preserves</subject><subject>Radially projected finite elements</subject><subject>Reaction–diffusion systems</subject><subject>Surface geometry</subject><subject>Surface partial differential equations</subject><issn>0168-9274</issn><issn>1873-5460</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp9kM1KxTAQhYMoeL36BG66dNOaadKfLFzIxT8QdKHgLjTpFFL6c820wt35Dr6hT2Lqde1qDsw5h5mPsXPgCXDIL9uk2g5zn6QcZAJpwiE9YCsoCxFnMueHbBVcZazSQh6zE6KWc55lkq_Y27MfW7QT1lHjBjdhhB32OEwUNaOPPFZ2cuPw_flVu6aZKeiIdjRhT9Eip2pZV34X2W6k0EKzbyqLdMqOmqojPPuba_Z6e_OyuY8fn-4eNtePsRUlTHGpFFY5F6qGMldCKJmD4GBLk6q6BpHZzBgJhTQqTwFMkXNbCFMYY2pEFGLNLva9Wz--z0iT7h1Z7LpqwHEmDQWUSgoJMljF3mr9SOSx0Vvv-nC7Bq4XjrrVvxz1wlFDqgPHkLrapzB88eHQa7IOB4u18wGcrkf3b_4Ho1R_DQ</recordid><startdate>20151001</startdate><enddate>20151001</enddate><creator>Tuncer, N.</creator><creator>Madzvamuse, A.</creator><creator>Meir, A.J.</creator><general>Elsevier B.V</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><orcidid>https://orcid.org/0000-0002-6388-2499</orcidid></search><sort><creationdate>20151001</creationdate><title>Projected finite elements for reaction–diffusion systems on stationary closed surfaces</title><author>Tuncer, N. ; Madzvamuse, A. ; Meir, A.J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Discretization</topic><topic>Finite element method</topic><topic>Formations</topic><topic>Mathematical analysis</topic><topic>Mathematical models</topic><topic>Pattern formation</topic><topic>Pattern generation</topic><topic>Preserves</topic><topic>Radially projected finite elements</topic><topic>Reaction–diffusion systems</topic><topic>Surface geometry</topic><topic>Surface partial differential equations</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tuncer, N.</creatorcontrib><creatorcontrib>Madzvamuse, A.</creatorcontrib><creatorcontrib>Meir, A.J.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><jtitle>Applied numerical mathematics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tuncer, N.</au><au>Madzvamuse, A.</au><au>Meir, A.J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Projected finite elements for reaction–diffusion systems on stationary closed surfaces</atitle><jtitle>Applied numerical mathematics</jtitle><date>2015-10-01</date><risdate>2015</risdate><volume>96</volume><spage>45</spage><epage>71</epage><pages>45-71</pages><issn>0168-9274</issn><eissn>1873-5460</eissn><abstract>In this paper we present a robust, efficient and accurate finite element method for solving reaction–diffusion systems on stationary spheroidal surfaces (these are surfaces which are deformations of the sphere such as ellipsoids, dumbbells, and heart-shaped surfaces) with potential applications in the areas of developmental biology, cancer research, wound healing, tissue regeneration, and cell motility among many others where such models are routinely used. Our method is inspired by the radially projected finite element method introduced in [39]. (Hence the name “projected” finite element method.) The advantages of the projected finite element method are that it is easy to implement and that it provides a conforming finite element discretization which is “logically” rectangular. To demonstrate the robustness, applicability and generality of this numerical method, we present solutions of reaction–diffusion systems on various spheroidal surfaces. We show that the method presented in this paper preserves positivity of the solutions of reaction–diffusion equations which is not generally true for Galerkin type methods. We conclude that surface geometry plays a pivotal role in pattern formation. For a fixed set of model parameter values, different surfaces give rise to different pattern generation sequences of either spots or stripes or a combination (observed as circular spot-stripe patterns). These results clearly demonstrate the need for detailed theoretical analytical studies to elucidate how surface geometry and curvature influence pattern formation on complex surfaces.
•To our knowledge first article to present the radially projected finite element for reaction–diffusion systems on surfaces.•The method gives a geometrically exact discretization of the surfaces.•We demonstrate that surface geometry and curvature play pivotal roles in pattern formation.</abstract><pub>Elsevier B.V</pub><doi>10.1016/j.apnum.2014.12.012</doi><tpages>27</tpages><orcidid>https://orcid.org/0000-0002-6388-2499</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0168-9274 |
ispartof | Applied numerical mathematics, 2015-10, Vol.96, p.45-71 |
issn | 0168-9274 1873-5460 |
language | eng |
recordid | cdi_proquest_miscellaneous_1718943414 |
source | ScienceDirect: Mathematics Backfile; ScienceDirect Freedom Collection |
subjects | Discretization Finite element method Formations Mathematical analysis Mathematical models Pattern formation Pattern generation Preserves Radially projected finite elements Reaction–diffusion systems Surface geometry Surface partial differential equations |
title | Projected finite elements for reaction–diffusion systems on stationary closed surfaces |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-03T15%3A08%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Projected%20finite%20elements%20for%20reaction%E2%80%93diffusion%20systems%20on%20stationary%20closed%20surfaces&rft.jtitle=Applied%20numerical%20mathematics&rft.au=Tuncer,%20N.&rft.date=2015-10-01&rft.volume=96&rft.spage=45&rft.epage=71&rft.pages=45-71&rft.issn=0168-9274&rft.eissn=1873-5460&rft_id=info:doi/10.1016/j.apnum.2014.12.012&rft_dat=%3Cproquest_cross%3E1718943414%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c381t-899ea6039d1869339461301c8b29dd135c5bb4174b96211b760c73b7bbbdeee33%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1718943414&rft_id=info:pmid/&rfr_iscdi=true |