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Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress
To understand molecular responses to salt stress in soybean ( Glycine max [L.] Merr.), we identified 106 salt-inducible soybean genes that expressed differentially at 72 h after 100 mM NaCl treatment using the cDNA-amplified fragment length polymorphism (AFLP) method. The genes were designated as G....
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Published in: | Gene 2005-08, Vol.356, p.135-145 |
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creator | Aoki, Ayako Kanegami, Akemi Mihara, Michiko Kojima, Toshio Shiraiwa, Masakazu Takahara, Hidenari |
description | To understand molecular responses to salt stress in soybean (
Glycine max [L.] Merr.), we identified 106 salt-inducible soybean genes that expressed differentially at 72 h after 100 mM NaCl treatment using the cDNA-amplified fragment length polymorphism (AFLP) method. The genes were designated as
G. max Transcript-Derived Fragments (
GmTDFs). Among these genes, we characterized a soybean gene
GmTDF-5 that encoded an unknown protein of 367 amino acids. The GmTDF-5 protein was a putative cytosolic protein with two leucine-zipper motifs at the N-terminal and was calculated as 40.7 kDa. Southern blot analysis indicated that
GmTDF-5 presents as an intron-less single gene on soybean genome and possibly distributes narrowly throughout the higher plants. By 100 mM NaCl treatment, the gene expression of
GmTDF-5 was induced in the stem and lower-expanded leaf, and the amount of mRNA increased 5.1- and 2.0-fold up to 72 h, respectively. Interestingly,
GmTDF-5 expression in the upper-leaf appeared dramatically with 10.0-fold increase at 72 h after the salt stress, but not until 48 h. Hyperosmotic pressure (mannitol treatment) and dehydration also caused the increases similar to NaCl treatment in the levels of
GmTDF-5 expression. These results suggest that GmTDF-5 might be a novel cytosolic leucine-zipper-like protein functioning in mature organs of soybean shoot against water-potential changes. |
doi_str_mv | 10.1016/j.gene.2005.04.014 |
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Glycine max [L.] Merr.), we identified 106 salt-inducible soybean genes that expressed differentially at 72 h after 100 mM NaCl treatment using the cDNA-amplified fragment length polymorphism (AFLP) method. The genes were designated as
G. max Transcript-Derived Fragments (
GmTDFs). Among these genes, we characterized a soybean gene
GmTDF-5 that encoded an unknown protein of 367 amino acids. The GmTDF-5 protein was a putative cytosolic protein with two leucine-zipper motifs at the N-terminal and was calculated as 40.7 kDa. Southern blot analysis indicated that
GmTDF-5 presents as an intron-less single gene on soybean genome and possibly distributes narrowly throughout the higher plants. By 100 mM NaCl treatment, the gene expression of
GmTDF-5 was induced in the stem and lower-expanded leaf, and the amount of mRNA increased 5.1- and 2.0-fold up to 72 h, respectively. Interestingly,
GmTDF-5 expression in the upper-leaf appeared dramatically with 10.0-fold increase at 72 h after the salt stress, but not until 48 h. Hyperosmotic pressure (mannitol treatment) and dehydration also caused the increases similar to NaCl treatment in the levels of
GmTDF-5 expression. These results suggest that GmTDF-5 might be a novel cytosolic leucine-zipper-like protein functioning in mature organs of soybean shoot against water-potential changes.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2005.04.014</identifier><identifier>PMID: 15964719</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Abscisic Acid - pharmacology ; Amino Acid Sequence ; Base Sequence ; Blotting, Northern ; cDNA-AFLP ; Cloning, Molecular ; Dehydration ; DNA, Complementary - chemistry ; DNA, Complementary - genetics ; Gene expression ; Gene Expression Regulation, Plant - drug effects ; Genes, Plant - genetics ; Glycine max ; Glycine max - drug effects ; Glycine max - genetics ; Glycine max [L.] Merr ; GmTDF ; Hydrophobic and Hydrophilic Interactions ; Mannitol - pharmacology ; Molecular Sequence Data ; Plant Leaves - drug effects ; Plant Leaves - genetics ; Plant Roots - drug effects ; Plant Roots - genetics ; Plant Stems - drug effects ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Salicylic Acid - pharmacology ; Sequence Analysis, DNA ; Sodium Chloride - pharmacology ; Soil salinity ; Soybean Proteins - chemistry ; Soybean Proteins - genetics</subject><ispartof>Gene, 2005-08, Vol.356, p.135-145</ispartof><rights>2005 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c451t-f3f5b71afa76d4482b088b7b891face98882c735feaf7b3e54fd702cf9e2e9633</citedby><cites>FETCH-LOGICAL-c451t-f3f5b71afa76d4482b088b7b891face98882c735feaf7b3e54fd702cf9e2e9633</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15964719$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aoki, Ayako</creatorcontrib><creatorcontrib>Kanegami, Akemi</creatorcontrib><creatorcontrib>Mihara, Michiko</creatorcontrib><creatorcontrib>Kojima, Toshio</creatorcontrib><creatorcontrib>Shiraiwa, Masakazu</creatorcontrib><creatorcontrib>Takahara, Hidenari</creatorcontrib><title>Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress</title><title>Gene</title><addtitle>Gene</addtitle><description>To understand molecular responses to salt stress in soybean (
Glycine max [L.] Merr.), we identified 106 salt-inducible soybean genes that expressed differentially at 72 h after 100 mM NaCl treatment using the cDNA-amplified fragment length polymorphism (AFLP) method. The genes were designated as
G. max Transcript-Derived Fragments (
GmTDFs). Among these genes, we characterized a soybean gene
GmTDF-5 that encoded an unknown protein of 367 amino acids. The GmTDF-5 protein was a putative cytosolic protein with two leucine-zipper motifs at the N-terminal and was calculated as 40.7 kDa. Southern blot analysis indicated that
GmTDF-5 presents as an intron-less single gene on soybean genome and possibly distributes narrowly throughout the higher plants. By 100 mM NaCl treatment, the gene expression of
GmTDF-5 was induced in the stem and lower-expanded leaf, and the amount of mRNA increased 5.1- and 2.0-fold up to 72 h, respectively. Interestingly,
GmTDF-5 expression in the upper-leaf appeared dramatically with 10.0-fold increase at 72 h after the salt stress, but not until 48 h. Hyperosmotic pressure (mannitol treatment) and dehydration also caused the increases similar to NaCl treatment in the levels of
GmTDF-5 expression. These results suggest that GmTDF-5 might be a novel cytosolic leucine-zipper-like protein functioning in mature organs of soybean shoot against water-potential changes.</description><subject>Abscisic Acid - pharmacology</subject><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>Blotting, Northern</subject><subject>cDNA-AFLP</subject><subject>Cloning, Molecular</subject><subject>Dehydration</subject><subject>DNA, Complementary - chemistry</subject><subject>DNA, Complementary - genetics</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Plant - drug effects</subject><subject>Genes, Plant - genetics</subject><subject>Glycine max</subject><subject>Glycine max - drug effects</subject><subject>Glycine max - genetics</subject><subject>Glycine max [L.] Merr</subject><subject>GmTDF</subject><subject>Hydrophobic and Hydrophilic Interactions</subject><subject>Mannitol - pharmacology</subject><subject>Molecular Sequence Data</subject><subject>Plant Leaves - drug effects</subject><subject>Plant Leaves - genetics</subject><subject>Plant Roots - drug effects</subject><subject>Plant Roots - genetics</subject><subject>Plant Stems - drug effects</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Salicylic Acid - pharmacology</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium Chloride - pharmacology</subject><subject>Soil salinity</subject><subject>Soybean Proteins - chemistry</subject><subject>Soybean Proteins - genetics</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNp9kEFPGzEQha0K1ATaP9AD8onbbu31bmxLvVSoUCQQFzhbXnucOjh2anuRQP3xbJpIvXUuc3nvzbwPoS-UtJTQ1ddNu4YIbUfI0JK-JbT_gJZUcNkQwsQJWhLGRUMplQt0VsqGzDMM3Ue0oINc9ZzKJfpznwKYKeiMTUjRxzXW0WLzS2dtKmT_pqtPESeHNY7pBQIu6XUEHfH-OIZokv3rwgEm4yM0b363g9wE_wx4l1MFH7GPdjJgcU246FBxqRlK-YROnQ4FPh_3OXq6_vF49bO5e7i5vfp-15h-oLVxzA0jp9ppvrJ9L7qRCDHyUUjqtAEphOgMZ4MD7fjIYOid5aQzTkIHcsXYObo85M7v_J6gVLX1xUAIOkKaiqKcSSZFNwu7g9DkVEoGp3bZb3V-VZSoPXO1Ufvaas9ckV7NzGfTxTF9Grdg_1mOkGfBt4MA5o4vHrIqxs_gwPoMpiqb_P_y3wGmQZWm</recordid><startdate>20050815</startdate><enddate>20050815</enddate><creator>Aoki, Ayako</creator><creator>Kanegami, Akemi</creator><creator>Mihara, Michiko</creator><creator>Kojima, Toshio</creator><creator>Shiraiwa, Masakazu</creator><creator>Takahara, Hidenari</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20050815</creationdate><title>Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress</title><author>Aoki, Ayako ; Kanegami, Akemi ; Mihara, Michiko ; Kojima, Toshio ; Shiraiwa, Masakazu ; Takahara, Hidenari</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c451t-f3f5b71afa76d4482b088b7b891face98882c735feaf7b3e54fd702cf9e2e9633</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Abscisic Acid - pharmacology</topic><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>Blotting, Northern</topic><topic>cDNA-AFLP</topic><topic>Cloning, Molecular</topic><topic>Dehydration</topic><topic>DNA, Complementary - chemistry</topic><topic>DNA, Complementary - genetics</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Plant - drug effects</topic><topic>Genes, Plant - genetics</topic><topic>Glycine max</topic><topic>Glycine max - drug effects</topic><topic>Glycine max - genetics</topic><topic>Glycine max [L.] Merr</topic><topic>GmTDF</topic><topic>Hydrophobic and Hydrophilic Interactions</topic><topic>Mannitol - pharmacology</topic><topic>Molecular Sequence Data</topic><topic>Plant Leaves - drug effects</topic><topic>Plant Leaves - genetics</topic><topic>Plant Roots - drug effects</topic><topic>Plant Roots - genetics</topic><topic>Plant Stems - drug effects</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Salicylic Acid - pharmacology</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium Chloride - pharmacology</topic><topic>Soil salinity</topic><topic>Soybean Proteins - chemistry</topic><topic>Soybean Proteins - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aoki, Ayako</creatorcontrib><creatorcontrib>Kanegami, Akemi</creatorcontrib><creatorcontrib>Mihara, Michiko</creatorcontrib><creatorcontrib>Kojima, Toshio</creatorcontrib><creatorcontrib>Shiraiwa, Masakazu</creatorcontrib><creatorcontrib>Takahara, Hidenari</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Gene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aoki, Ayako</au><au>Kanegami, Akemi</au><au>Mihara, Michiko</au><au>Kojima, Toshio</au><au>Shiraiwa, Masakazu</au><au>Takahara, Hidenari</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress</atitle><jtitle>Gene</jtitle><addtitle>Gene</addtitle><date>2005-08-15</date><risdate>2005</risdate><volume>356</volume><spage>135</spage><epage>145</epage><pages>135-145</pages><issn>0378-1119</issn><eissn>1879-0038</eissn><abstract>To understand molecular responses to salt stress in soybean (
Glycine max [L.] Merr.), we identified 106 salt-inducible soybean genes that expressed differentially at 72 h after 100 mM NaCl treatment using the cDNA-amplified fragment length polymorphism (AFLP) method. The genes were designated as
G. max Transcript-Derived Fragments (
GmTDFs). Among these genes, we characterized a soybean gene
GmTDF-5 that encoded an unknown protein of 367 amino acids. The GmTDF-5 protein was a putative cytosolic protein with two leucine-zipper motifs at the N-terminal and was calculated as 40.7 kDa. Southern blot analysis indicated that
GmTDF-5 presents as an intron-less single gene on soybean genome and possibly distributes narrowly throughout the higher plants. By 100 mM NaCl treatment, the gene expression of
GmTDF-5 was induced in the stem and lower-expanded leaf, and the amount of mRNA increased 5.1- and 2.0-fold up to 72 h, respectively. Interestingly,
GmTDF-5 expression in the upper-leaf appeared dramatically with 10.0-fold increase at 72 h after the salt stress, but not until 48 h. Hyperosmotic pressure (mannitol treatment) and dehydration also caused the increases similar to NaCl treatment in the levels of
GmTDF-5 expression. These results suggest that GmTDF-5 might be a novel cytosolic leucine-zipper-like protein functioning in mature organs of soybean shoot against water-potential changes.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>15964719</pmid><doi>10.1016/j.gene.2005.04.014</doi><tpages>11</tpages></addata></record> |
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subjects | Abscisic Acid - pharmacology Amino Acid Sequence Base Sequence Blotting, Northern cDNA-AFLP Cloning, Molecular Dehydration DNA, Complementary - chemistry DNA, Complementary - genetics Gene expression Gene Expression Regulation, Plant - drug effects Genes, Plant - genetics Glycine max Glycine max - drug effects Glycine max - genetics Glycine max [L.] Merr GmTDF Hydrophobic and Hydrophilic Interactions Mannitol - pharmacology Molecular Sequence Data Plant Leaves - drug effects Plant Leaves - genetics Plant Roots - drug effects Plant Roots - genetics Plant Stems - drug effects RNA, Messenger - genetics RNA, Messenger - metabolism Salicylic Acid - pharmacology Sequence Analysis, DNA Sodium Chloride - pharmacology Soil salinity Soybean Proteins - chemistry Soybean Proteins - genetics |
title | Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress |
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