Complete mitochondrial genome of Yangtze River wild common carp (Cyprinus carpio haematopterus) and Russian scattered scale mirror carp (Cyprinus carpio carpio)

We sequenced the complete mitogenomes of (Cyprinus carpio haematopterus) and Russian scattered scale mirror carp (Cyprinus carpio carpio). Comparison of these two mitogenomes revealed that the mitogenomes of these two common carp strains were remarkably similar in genome length, gene order and conte...

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Bibliographic Details
Published in:Mitochondrial DNA. Part A. DNA mapping, sequencing, and analysis sequencing, and analysis, 2016-01, Vol.27 (1), p.263-264
Main Authors: Hu, Guang Fu, Liu, Xiang Jiang, Zou, Gui Wei, Li, Zhong, Liang, Hong-Wei, Hu, Shao-na
Format: Article
Language:English
Subjects:
Animals
Carps - genetics
Genes, rRNA
Genome, Mitochondrial - genetics
Mitochondrial genome
Molecular Sequence Annotation
Molecular Sequence Data
Open Reading Frames - genetics
RNA, Transfer - genetics
Russian scattered scale mirror carp
Sequence Analysis, DNA
Yangtze River wild common carp
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Summary:We sequenced the complete mitogenomes of (Cyprinus carpio haematopterus) and Russian scattered scale mirror carp (Cyprinus carpio carpio). Comparison of these two mitogenomes revealed that the mitogenomes of these two common carp strains were remarkably similar in genome length, gene order and content, and AT content. There were only 55 bp variations in 16,581 nucleotides. About 1 bp variation was located in rRNAs, 2 bp in tRNAs, 9 bp in the control region and 43 bp in protein-coding genes. Furthermore, forty-three variable nucleotides in the protein-coding genes of the two strains led to four variable amino acids, which were located in the ND2, ATPase 6, ND5 and ND6 genes, respectively.
ISSN:2470-1394
2470-1408
DOI:10.3109/19401736.2014.883617