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Forensic evaluation and population genetic study of 30 insertion/deletion polymorphisms in a Chinese Yi group
Insertion/deletion polymorphisms have become a research hot spot in forensic science due to their tremendous potential in recent years. In the present study, we investigated 30 indel loci in a Chinese Yi ethnic group. The allele frequencies of the short allele of the 30 indel loci were in the range...
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Published in: | Electrophoresis 2015-05, Vol.36 (9-10), p.1196-1201 |
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container_title | Electrophoresis |
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creator | Zhang, Yu-Dang Shen, Chun-Mei Jin, Rui Li, Ya-Ni Wang, Bo Ma, Li-Xia Meng, Hao-Tian Yan, Jiang-Wei Dan Wang, Hong Yang, Ze-Long Zhu, Bo-Feng |
description | Insertion/deletion polymorphisms have become a research hot spot in forensic science due to their tremendous potential in recent years. In the present study, we investigated 30 indel loci in a Chinese Yi ethnic group. The allele frequencies of the short allele of the 30 indel loci were in the range of 0.1025–0.9221. The power of discrimination values were observed ranging from to 0.2630 (HLD111 locus) to 0.6607 (HLD70 locus) and probability of exclusion values ranged from 0.0189 (HLD111 locus) to 0.2343 (HLD56 locus). The combined power of discrimination and power of exclusion for 30 loci in the studied Yi group were 0.99999999995713 and 0.97746, respectively, which showed tremendous potential for forensic personal identification in the Yi group. Moreover, the DA distances, phylogenetic tree, principal component analysis, and cluster analysis showed the Yi group had close genetic relationships with the Tibetan, South Korean, Chinese Han, and She groups. |
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In the present study, we investigated 30 indel loci in a Chinese Yi ethnic group. The allele frequencies of the short allele of the 30 indel loci were in the range of 0.1025–0.9221. The power of discrimination values were observed ranging from to 0.2630 (HLD111 locus) to 0.6607 (HLD70 locus) and probability of exclusion values ranged from 0.0189 (HLD111 locus) to 0.2343 (HLD56 locus). The combined power of discrimination and power of exclusion for 30 loci in the studied Yi group were 0.99999999995713 and 0.97746, respectively, which showed tremendous potential for forensic personal identification in the Yi group. Moreover, the DA distances, phylogenetic tree, principal component analysis, and cluster analysis showed the Yi group had close genetic relationships with the Tibetan, South Korean, Chinese Han, and She groups.</description><identifier>ISSN: 0173-0835</identifier><identifier>EISSN: 1522-2683</identifier><identifier>DOI: 10.1002/elps.201500003</identifier><identifier>PMID: 25753218</identifier><language>eng</language><publisher>Germany: Blackwell Publishing Ltd</publisher><subject>Asian Continental Ancestry Group - classification ; Asian Continental Ancestry Group - genetics ; China ; Deletion ; Discrimination ; Ethnic Groups - classification ; Ethnic Groups - genetics ; Evaluation ; Forensic application ; Forensic engineering ; Forensic Genetics ; Forensic science ; Genetic relationships ; Genetics ; Genetics, Population ; Humans ; Indel ; INDEL Mutation - genetics ; Insertion ; Linkage Disequilibrium ; Loci ; Phylogeny ; Polymorphism ; Polymorphism, Genetic ; Yi ethnic group</subject><ispartof>Electrophoresis, 2015-05, Vol.36 (9-10), p.1196-1201</ispartof><rights>2015 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5148-67aca1d0d9001b6a5ba51cd8097f92959490934aaee7b276d27f13fe8bc71e323</citedby><cites>FETCH-LOGICAL-c5148-67aca1d0d9001b6a5ba51cd8097f92959490934aaee7b276d27f13fe8bc71e323</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25753218$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhang, Yu-Dang</creatorcontrib><creatorcontrib>Shen, Chun-Mei</creatorcontrib><creatorcontrib>Jin, Rui</creatorcontrib><creatorcontrib>Li, Ya-Ni</creatorcontrib><creatorcontrib>Wang, Bo</creatorcontrib><creatorcontrib>Ma, Li-Xia</creatorcontrib><creatorcontrib>Meng, Hao-Tian</creatorcontrib><creatorcontrib>Yan, Jiang-Wei</creatorcontrib><creatorcontrib>Dan Wang, Hong</creatorcontrib><creatorcontrib>Yang, Ze-Long</creatorcontrib><creatorcontrib>Zhu, Bo-Feng</creatorcontrib><title>Forensic evaluation and population genetic study of 30 insertion/deletion polymorphisms in a Chinese Yi group</title><title>Electrophoresis</title><addtitle>ELECTROPHORESIS</addtitle><description>Insertion/deletion polymorphisms have become a research hot spot in forensic science due to their tremendous potential in recent years. In the present study, we investigated 30 indel loci in a Chinese Yi ethnic group. The allele frequencies of the short allele of the 30 indel loci were in the range of 0.1025–0.9221. The power of discrimination values were observed ranging from to 0.2630 (HLD111 locus) to 0.6607 (HLD70 locus) and probability of exclusion values ranged from 0.0189 (HLD111 locus) to 0.2343 (HLD56 locus). The combined power of discrimination and power of exclusion for 30 loci in the studied Yi group were 0.99999999995713 and 0.97746, respectively, which showed tremendous potential for forensic personal identification in the Yi group. Moreover, the DA distances, phylogenetic tree, principal component analysis, and cluster analysis showed the Yi group had close genetic relationships with the Tibetan, South Korean, Chinese Han, and She groups.</description><subject>Asian Continental Ancestry Group - classification</subject><subject>Asian Continental Ancestry Group - genetics</subject><subject>China</subject><subject>Deletion</subject><subject>Discrimination</subject><subject>Ethnic Groups - classification</subject><subject>Ethnic Groups - genetics</subject><subject>Evaluation</subject><subject>Forensic application</subject><subject>Forensic engineering</subject><subject>Forensic Genetics</subject><subject>Forensic science</subject><subject>Genetic relationships</subject><subject>Genetics</subject><subject>Genetics, Population</subject><subject>Humans</subject><subject>Indel</subject><subject>INDEL Mutation - genetics</subject><subject>Insertion</subject><subject>Linkage Disequilibrium</subject><subject>Loci</subject><subject>Phylogeny</subject><subject>Polymorphism</subject><subject>Polymorphism, Genetic</subject><subject>Yi ethnic group</subject><issn>0173-0835</issn><issn>1522-2683</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqN0Utv1DAUBWALgehQ2LJEXrLJ1M_YXqJRpyCmvB9iZTnJTWtw4tROgPn3ZEiZbfHGsvydK10dhJ5SsqaEsDMIQ14zQiWZD7-HVlQyVrBS8_toRajiBdFcnqBHOX-fhTBCPEQnTCrJGdUr1G1jgj77GsNPFyY3-thj1zd4iMMUlucV9DDOIo9Ts8exxZxg32dIh9-zBgL8ZUMM-y6m4drnLs8AO7y59j1kwN88vkpxGh6jB60LGZ7c3qfo8_b80-ZlsXt78WrzYlfUkgpdlMrVjjakMYTQqnSycpLWjSZGtYYZaYQhhgvnAFTFVNkw1VLegq5qRYEzfoqeL3OHFG8myKPtfK4hBNdDnLKl8_qilFLru2lpGJeaMfMfVFNWMsXpTNcLrVPMOUFrh-Q7l_aWEnsozh6Ks8fi5sCz29lT1UFz5P-amoFYwC8fYH_HOHu-e_dRCn6IFUvM5xF-H2Mu_bCl4krar28u7JetutSXH17b9_wP-8-zVg</recordid><startdate>201505</startdate><enddate>201505</enddate><creator>Zhang, Yu-Dang</creator><creator>Shen, Chun-Mei</creator><creator>Jin, Rui</creator><creator>Li, Ya-Ni</creator><creator>Wang, Bo</creator><creator>Ma, Li-Xia</creator><creator>Meng, Hao-Tian</creator><creator>Yan, Jiang-Wei</creator><creator>Dan Wang, Hong</creator><creator>Yang, Ze-Long</creator><creator>Zhu, Bo-Feng</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7U5</scope><scope>8FD</scope><scope>L7M</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>201505</creationdate><title>Forensic evaluation and population genetic study of 30 insertion/deletion polymorphisms in a Chinese Yi group</title><author>Zhang, Yu-Dang ; Shen, Chun-Mei ; Jin, Rui ; Li, Ya-Ni ; Wang, Bo ; Ma, Li-Xia ; Meng, Hao-Tian ; Yan, Jiang-Wei ; Dan Wang, Hong ; Yang, Ze-Long ; Zhu, Bo-Feng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5148-67aca1d0d9001b6a5ba51cd8097f92959490934aaee7b276d27f13fe8bc71e323</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Asian Continental Ancestry Group - classification</topic><topic>Asian Continental Ancestry Group - genetics</topic><topic>China</topic><topic>Deletion</topic><topic>Discrimination</topic><topic>Ethnic Groups - classification</topic><topic>Ethnic Groups - genetics</topic><topic>Evaluation</topic><topic>Forensic application</topic><topic>Forensic engineering</topic><topic>Forensic Genetics</topic><topic>Forensic science</topic><topic>Genetic relationships</topic><topic>Genetics</topic><topic>Genetics, Population</topic><topic>Humans</topic><topic>Indel</topic><topic>INDEL Mutation - genetics</topic><topic>Insertion</topic><topic>Linkage Disequilibrium</topic><topic>Loci</topic><topic>Phylogeny</topic><topic>Polymorphism</topic><topic>Polymorphism, Genetic</topic><topic>Yi ethnic group</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Yu-Dang</creatorcontrib><creatorcontrib>Shen, Chun-Mei</creatorcontrib><creatorcontrib>Jin, Rui</creatorcontrib><creatorcontrib>Li, Ya-Ni</creatorcontrib><creatorcontrib>Wang, Bo</creatorcontrib><creatorcontrib>Ma, Li-Xia</creatorcontrib><creatorcontrib>Meng, Hao-Tian</creatorcontrib><creatorcontrib>Yan, Jiang-Wei</creatorcontrib><creatorcontrib>Dan Wang, Hong</creatorcontrib><creatorcontrib>Yang, Ze-Long</creatorcontrib><creatorcontrib>Zhu, Bo-Feng</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Electrophoresis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Yu-Dang</au><au>Shen, Chun-Mei</au><au>Jin, Rui</au><au>Li, Ya-Ni</au><au>Wang, Bo</au><au>Ma, Li-Xia</au><au>Meng, Hao-Tian</au><au>Yan, Jiang-Wei</au><au>Dan Wang, Hong</au><au>Yang, Ze-Long</au><au>Zhu, Bo-Feng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Forensic evaluation and population genetic study of 30 insertion/deletion polymorphisms in a Chinese Yi group</atitle><jtitle>Electrophoresis</jtitle><addtitle>ELECTROPHORESIS</addtitle><date>2015-05</date><risdate>2015</risdate><volume>36</volume><issue>9-10</issue><spage>1196</spage><epage>1201</epage><pages>1196-1201</pages><issn>0173-0835</issn><eissn>1522-2683</eissn><abstract>Insertion/deletion polymorphisms have become a research hot spot in forensic science due to their tremendous potential in recent years. In the present study, we investigated 30 indel loci in a Chinese Yi ethnic group. The allele frequencies of the short allele of the 30 indel loci were in the range of 0.1025–0.9221. The power of discrimination values were observed ranging from to 0.2630 (HLD111 locus) to 0.6607 (HLD70 locus) and probability of exclusion values ranged from 0.0189 (HLD111 locus) to 0.2343 (HLD56 locus). The combined power of discrimination and power of exclusion for 30 loci in the studied Yi group were 0.99999999995713 and 0.97746, respectively, which showed tremendous potential for forensic personal identification in the Yi group. Moreover, the DA distances, phylogenetic tree, principal component analysis, and cluster analysis showed the Yi group had close genetic relationships with the Tibetan, South Korean, Chinese Han, and She groups.</abstract><cop>Germany</cop><pub>Blackwell Publishing Ltd</pub><pmid>25753218</pmid><doi>10.1002/elps.201500003</doi><tpages>6</tpages></addata></record> |
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subjects | Asian Continental Ancestry Group - classification Asian Continental Ancestry Group - genetics China Deletion Discrimination Ethnic Groups - classification Ethnic Groups - genetics Evaluation Forensic application Forensic engineering Forensic Genetics Forensic science Genetic relationships Genetics Genetics, Population Humans Indel INDEL Mutation - genetics Insertion Linkage Disequilibrium Loci Phylogeny Polymorphism Polymorphism, Genetic Yi ethnic group |
title | Forensic evaluation and population genetic study of 30 insertion/deletion polymorphisms in a Chinese Yi group |
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